diff --git a/.gitignore b/.gitignore index ba8f35d..cce35a8 100644 --- a/.gitignore +++ b/.gitignore @@ -1,7 +1,7 @@ -/Macaulay2.png -/Macaulay2-1.4-r12617-src.tar.bz2 -/Macaulay2-1.5-r15838.tar.xz -/Macaulay2-1.5-r15955-src.tar.bz2 /Normaliz.m2 -/Macaulay2-1.6-77124166d123caab69ac4655d15b6bfab3e74496-src.tar.bz2 -/gtest-1.6.0.tar.gz +/*.png +/*.tar.bz2 +/*.tar.gz +/*.tgz +/*.tar.xz +/*.zip diff --git a/Macaulay2-1.16-ulimit.patch b/Macaulay2-1.16-ulimit.patch new file mode 100644 index 0000000..ad15955 --- /dev/null +++ b/Macaulay2-1.16-ulimit.patch @@ -0,0 +1,95 @@ +--- M2/libraries/Makefile.library.in.orig 2024-11-01 04:33:00.000000000 -0600 ++++ M2/libraries/Makefile.library.in 2025-02-18 20:23:38.667139158 -0700 +@@ -254,10 +254,10 @@ ifneq (@DOWNLOAD@,yes) + @ false + endif + +-SLIMIT ?= 8192 +-TLIMIT ?= 100 +-MLIMIT ?= 400000 +-VLIMIT ?= 400000 ++SLIMIT ?= 16384 ++TLIMIT ?= 200 ++MLIMIT ?= 800000 ++VLIMIT ?= 800000 + LIMIT := : + ifeq (@ULIMIT_T@,yes) + LIMIT += ; ulimit -t $(TLIMIT) +--- M2/Macaulay2/m2/basictests/Makefile.in.orig 2024-11-01 04:33:00.000000000 -0600 ++++ M2/Macaulay2/m2/basictests/Makefile.in 2025-02-18 20:23:38.667139158 -0700 +@@ -22,17 +22,17 @@ $(TESTRESULTS) : @pre_exec_prefix@/bin/M + ARGS := --silent -q --stop --no-core -e 'srcdir = "@srcdir@/"' + + ifeq "@DEBUG@" "no" +-TLIMIT ?= 20 +-MLIMIT ?= 600000 +-VLIMIT ?= 600000 ++TLIMIT ?= 40 ++MLIMIT ?= 1200000 ++VLIMIT ?= 1200000 + else +-TLIMIT ?= 60 +-MLIMIT ?= 700000 +-VLIMIT ?= 700000 ++TLIMIT ?= 120 ++MLIMIT ?= 1400000 ++VLIMIT ?= 1400000 + endif + + # make the stack limit always the same as it would be under MacOS +-SLIMIT ?= 8192 ++SLIMIT ?= 16384 + + LIMIT := + ifeq (@ULIMIT_T@,yes) +--- M2/Macaulay2/tests/ComputationsBook/Makefile.chapter.in.orig 2024-11-01 04:33:00.000000000 -0600 ++++ M2/Macaulay2/tests/ComputationsBook/Makefile.chapter.in 2025-02-18 20:23:38.667139158 -0700 +@@ -15,16 +15,16 @@ diff: + + LIMIT := + ifeq (@ULIMIT_T@,yes) +-LIMIT += ulimit -t 1200 ; ++LIMIT += ulimit -t 2400 ; + endif + ifeq (@ULIMIT_V@,yes) +-LIMIT += ulimit -v 1600000 ; ++LIMIT += ulimit -v 3200000 ; + endif + ifeq (@ULIMIT_M@,yes) +-LIMIT += ulimit -m 800000 ; ++LIMIT += ulimit -m 1600000 ; + endif + ifeq (@ULIMIT_S@,yes) +-LIMIT += ulimit -s 8192 ; ++LIMIT += ulimit -s 16384 ; + endif + + +--- M2/Macaulay2/tests/Makefile.test.in.orig 2024-11-01 04:33:00.000000000 -0600 ++++ M2/Macaulay2/tests/Makefile.test.in 2025-02-18 20:23:38.667139158 -0700 +@@ -6,18 +6,18 @@ DEFERRED ?= no + + DOTS ?= ../.. + ifeq "@DEBUG@" "no" +-TLIMIT ?= 90 ++TLIMIT ?= 180 + # one test doesn't work with only 150MB RAM, ext-total.m2, on a 64 bit intel machine: +-MLIMIT ?= 800000 +-VLIMIT ?= 2000000 ++MLIMIT ?= 1600000 ++VLIMIT ?= 4000000 + else + # give the debug version more time and space +-TLIMIT ?= 140 +-MLIMIT ?= 1200000 +-VLIMIT ?= 2000000 ++TLIMIT ?= 280 ++MLIMIT ?= 2400000 ++VLIMIT ?= 4000000 + endif + # make the stack limit always the same as it would be under MacOS +-SLIMIT ?= 8192 ++SLIMIT ?= 16384 + + LIMIT := + ifeq (@ULIMIT_T@,yes) diff --git a/Macaulay2-1.17-configure.patch b/Macaulay2-1.17-configure.patch new file mode 100644 index 0000000..8086b88 --- /dev/null +++ b/Macaulay2-1.17-configure.patch @@ -0,0 +1,15 @@ +--- M2/configure.ac.orig 2021-01-12 14:20:55.509886490 -0700 ++++ M2/configure.ac 2021-01-12 14:21:55.866785423 -0700 +@@ -252,9 +252,9 @@ AC_MSG_NOTICE([checking for C compiler f + + dnl always compile with "-g", so we can debug even optimized versions + if test "$GCC" = yes +-then CFLAGS="$CFLAGS -g3" +- CXXFLAGS="$CXXFLAGS -g3" +- LDFLAGS="$LDFLAGS -g3" ++then CFLAGS="$CFLAGS -g" ++ CXXFLAGS="$CXXFLAGS -g" ++ LDFLAGS="$LDFLAGS -g" + else CFLAGS="$CFLAGS -g" + CXXFLAGS="$CXXFLAGS -g" + LDFLAGS="$LDFLAGS -g" diff --git a/Macaulay2-1.18-lto.patch b/Macaulay2-1.18-lto.patch new file mode 100644 index 0000000..becd01c --- /dev/null +++ b/Macaulay2-1.18-lto.patch @@ -0,0 +1,35 @@ +--- M2/Macaulay2/c/compat.h.orig 2021-06-13 14:30:17.341325747 -0600 ++++ M2/Macaulay2/c/compat.h 2021-06-14 06:52:52.648631798 -0600 +@@ -2,7 +2,7 @@ + + #ifndef __cplusplus + #undef bool +-typedef char bool; ++typedef _Bool bool; + #endif + + extern char posfmt[]; +--- M2/Macaulay2/d/types.h.orig 2021-06-04 17:33:04.000000000 -0600 ++++ M2/Macaulay2/d/types.h 2021-06-13 14:30:27.804335244 -0600 +@@ -37,6 +37,10 @@ + # define LONGJUMP(env) longjmp(env, 1) + #endif + ++#ifdef __cplusplus ++extern "C" { ++#endif ++ + struct ArgCell + { + int argc, envc; +@@ -50,6 +54,10 @@ struct JumpCell + bool is_set; + }; + ++#ifdef __cplusplus ++} ++#endif ++ + #ifdef HAVE_UNISTD_H + #include + #endif diff --git a/Macaulay2-1.25-default_make_targets.patch b/Macaulay2-1.25-default_make_targets.patch new file mode 100644 index 0000000..3daf8c7 --- /dev/null +++ b/Macaulay2-1.25-default_make_targets.patch @@ -0,0 +1,12 @@ +--- M2/Macaulay2/Makefile.in.orig 2025-11-14 04:03:48.000000000 -0700 ++++ M2/Macaulay2/Makefile.in 2025-11-14 13:59:26.630241856 -0700 +@@ -3,8 +3,7 @@ + VPATH = @srcdir@ + include ../include/config.Makefile + all: @pre_docdir@/COPYING-GPL-2 @pre_docdir@/COPYING-GPL-3 @pre_docdir@/LAYOUT +-SUBDIRS = c d e system bin m2 man packages editors \ +- $(if $(filter html, @DOCUMENTATION@), html-check-links) tests ++SUBDIRS = c d e system bin m2 man packages editors tests + + define do-in-subdirs + $(foreach d,$(SUBDIRS), diff --git a/Macaulay2-1.25-optflags.patch b/Macaulay2-1.25-optflags.patch new file mode 100644 index 0000000..5c93b1c --- /dev/null +++ b/Macaulay2-1.25-optflags.patch @@ -0,0 +1,42 @@ +--- M2/configure.ac.orig 2025-11-14 04:03:48.000000000 -0700 ++++ M2/configure.ac 2025-11-14 13:57:06.905244494 -0700 +@@ -318,12 +318,12 @@ fi + ] + + if test "$OPTIMIZE" = yes +-then CFLAGS="$CFLAGS -O2" +- CXXFLAGS="$CXXFLAGS -O2" +- FCFLAGS="$FCFLAGS -O2" +-else CFLAGS="$CFLAGS -O0" +- CXXFLAGS="$CXXFLAGS -O0" +- FCFLAGS="$FCFLAGS -O0" ++then CFLAGS="-O2 $CFLAGS" ++ CXXFLAGS="-O2 $CXXFLAGS" ++ FCFLAGS="-O2 $FCFLAGS" ++else CFLAGS="-O0 $CFLAGS" ++ CXXFLAGS="-O0 $CXXFLAGS" ++ FCFLAGS="-O0 $FCFLAGS" + fi + + AC_SUBST(GCCVERSION) +--- M2/libraries/factory/Makefile.in.orig 2025-11-14 04:03:48.000000000 -0700 ++++ M2/libraries/factory/Makefile.in 2025-11-14 13:57:56.926954878 -0700 +@@ -7,7 +7,7 @@ + URL = https://macaulay2.com/Downloads/OtherSourceCode + VERSION = 4.4.1 + PATCHFILE = @abs_srcdir@/patch-$(VERSION) +-PRECONFIGURE = autoreconf -vif ++PRECONFIGURE = sed -i 's/-g0 -O3 //' m4/flags.m4 && autoreconf -vif + + BUILDTARGET = all ftmpl_inst.o + LIBRARIES = ftmpl_inst.o +--- M2/libraries/mpfr/Makefile.in.orig 2025-11-14 04:03:48.000000000 -0700 ++++ M2/libraries/mpfr/Makefile.in 2025-11-14 13:57:06.905816340 -0700 +@@ -36,6 +36,7 @@ CONFIGOPTIONS += --disable-shared + # endif + + # PRECONFIGURE = autoreconf -i ++PRECONFIGURE = sed -i '/LDFLAGS/s/ -Wl,--disable-new-dtags//g' configure + include ../Makefile.library + + BUILDOPTIONS += CPPFLAGS="$(CPPFLAGS)" diff --git a/Macaulay2-1.4-xdg_open.patch b/Macaulay2-1.4-xdg_open.patch deleted file mode 100644 index 378423a..0000000 --- a/Macaulay2-1.4-xdg_open.patch +++ /dev/null @@ -1,21 +0,0 @@ -diff -up Macaulay2-1.4-r12617/Macaulay2/m2/html.m2.xdg_open Macaulay2-1.4-r12617/Macaulay2/m2/html.m2 ---- Macaulay2-1.4-r12617/Macaulay2/m2/html.m2.xdg_open 2010-10-25 17:23:21.000000000 -0500 -+++ Macaulay2-1.4-r12617/Macaulay2/m2/html.m2 2011-01-14 14:03:28.173589110 -0600 -@@ -1244,6 +1244,7 @@ chk := ret -> if ret != 0 then ( - error "external command failed" - ) - browserMethods := hashTable { -+ "xdg open" => url -> {"xdg-open", url}, - "firefox" => url -> {"firefox", url}, - "open" => url -> {"open", url}, - "cygstart" => url -> {"cygstart", url}, -@@ -1259,7 +1260,8 @@ show URL := x -> ( - else - if version#"issue" === "Cygwin" then browser = "cygstart"; - if browser === "" then ( -- if runnable "firefox" then browser = "firefox" -+ if runnable "xdg-open" then browser = "xdg-open" -+ else if runnable "firefox" then browser = "firefox" - else if runnable "netscape" then browser = "netscape" - else error "no browser found, and none specified in $WWWBROWSER" - ); diff --git a/Macaulay2-1.6-default_make_targets.patch b/Macaulay2-1.6-default_make_targets.patch deleted file mode 100644 index 26199f1..0000000 --- a/Macaulay2-1.6-default_make_targets.patch +++ /dev/null @@ -1,12 +0,0 @@ -diff -up M2/Macaulay2/Makefile.in.default_make_targets M2/Macaulay2/Makefile.in ---- M2/Macaulay2/Makefile.in.default_make_targets 2013-05-20 13:46:59.832938746 -0500 -+++ M2/Macaulay2/Makefile.in 2013-05-20 13:47:49.404427202 -0500 -@@ -11,7 +11,7 @@ SUBDIRS = compat util probe regex c - ifeq "@DUMPDATA@" "yes" - SUBDIRS += dumpdata - endif --SUBDIRS += e-includes d e system kernel bin m2 emacs man packages html-check-links tests -+SUBDIRS += e-includes d e system kernel bin m2 emacs man packages html-check-links - SUBDIRS += book - SUBDIRS += packages/Macaulay2Doc/test - diff --git a/Macaulay2-1.6-disable_broken_debug_functions.patch b/Macaulay2-1.6-disable_broken_debug_functions.patch deleted file mode 100644 index 56428e8..0000000 --- a/Macaulay2-1.6-disable_broken_debug_functions.patch +++ /dev/null @@ -1,12 +0,0 @@ -diff -up Macaulay2-1.6-77124166d123caab69ac4655d15b6bfab3e74496/M2/Macaulay2/e/x-factor.cpp.disable_broken_debug_functions Macaulay2-1.6-77124166d123caab69ac4655d15b6bfab3e74496/M2/Macaulay2/e/x-factor.cpp ---- Macaulay2-1.6-77124166d123caab69ac4655d15b6bfab3e74496/M2/Macaulay2/e/x-factor.cpp.disable_broken_debug_functions 2013-11-25 12:51:28.668602955 -0600 -+++ Macaulay2-1.6-77124166d123caab69ac4655d15b6bfab3e74496/M2/Macaulay2/e/x-factor.cpp 2013-11-25 12:56:49.447994105 -0600 -@@ -225,7 +225,7 @@ static struct enter_factory foo1; - - // debugging display routines to be called from gdb - // needs factory to be configured without option --disable-streamio --#if 1 -+#if 0 - void showvar(Variable &t) { cout << t << endl; } - void showcf(CanonicalForm &t) { cout << t << endl; } - void showcfl(CFList &t) { cout << t << endl; } diff --git a/Macaulay2-1.6-gc.patch b/Macaulay2-1.6-gc.patch deleted file mode 100644 index ea99327..0000000 --- a/Macaulay2-1.6-gc.patch +++ /dev/null @@ -1,26 +0,0 @@ -Index: M2-release-1.6-stable-20130514/M2/configure.ac -=================================================================== ---- M2-release-1.6-stable-20130514.orig/M2/configure.ac -+++ M2-release-1.6-stable-20130514/M2/configure.ac -@@ -1125,15 +1125,14 @@ then AC_LANG(C) - AC_MSG_CHECKING(whether libgc is recent enough) - AC_RUN_IFELSE([AC_LANG_SOURCE([ - #include -+ #include - main () { -- extern unsigned GC_version; - FILE *msg = fdopen(AS_MESSAGE_FD,"w"); -- unsigned major, minor, alpha; -- major = GC_version >> 16; -- minor = (GC_version >> 8) & 0xff; -- alpha = GC_version & 0xff; -- if (alpha == 0xff) fprintf(msg,"(version %d.%d found) ", major, minor); -- else fprintf(msg,"(version %d.%d alpha %d found) ", major, minor, alpha); -+ unsigned major, minor, micro; -+ major = GC_VERSION_MAJOR; -+ minor = GC_VERSION_MINOR; -+ micro = GC_VERSION_MICRO; -+ fprintf(msg,"(version %d.%d.%d found) ", major, minor, micro); - return !( major > 7 || major == 7 && minor >= 2); }])], - [ AC_MSG_RESULT(yes) ], - [ AC_MSG_RESULT([no, version at least 7.2 is required (gc will be built from downloaded sources)]); BUILD_gc=yes ], diff --git a/Macaulay2-1.6-mpir.patch b/Macaulay2-1.6-mpir.patch deleted file mode 100644 index 89a030d..0000000 --- a/Macaulay2-1.6-mpir.patch +++ /dev/null @@ -1,30 +0,0 @@ -diff -up M2/configure.ac.mpir M2/configure.ac ---- M2/configure.ac.mpir 2013-05-20 13:49:54.384139899 -0500 -+++ M2/configure.ac 2013-05-20 13:51:10.492356267 -0500 -@@ -840,7 +840,7 @@ AC_SUBST(BUILTLIBS,) - # we always build it, and every program should link with it - # "gdbm" calls sync(), so its test programs need to link with it - AC_SUBST(PROGLIST, "4ti2 gfan normaliz nauty cddplus lrslib") --AC_SUBST(LIBLIST, " missing gc gdbm mpir mpfr pari readline ntl factory libfac lapack frobby glpk cddlib fplll givaro fflas_ffpack linbox boost mpc qd mpack flint gtest memtailor mathic mathicgb ") -+AC_SUBST(LIBLIST, " missing gc gdbm gmp mpfr pari readline ntl factory libfac lapack frobby glpk cddlib fplll givaro fflas_ffpack linbox boost mpc qd mpack flint gtest memtailor mathic mathicgb ") - - # a library is listed in BUILD_ALWAYS if and only if we *always* build it, - # even if the option "--disable-building" is specified: -@@ -999,16 +999,7 @@ dnl then BUILTLIBS="-lgmpxx -lgmp $BUILT - dnl else LIBS="-lgmpxx $LIBS" - dnl fi - --if test $BUILD_mpir = no --then AC_LANG(C) -- AC_SEARCH_LIBS(__mpir_version,mpir,,BUILD_mpir=yes) -- AC_CHECK_HEADER(mpir.h,,BUILD_mpir=yes) --fi --dnl frobby uses mpirxx --if test $BUILD_mpir = yes --then BUILTLIBS="-lmpirxx -lmpir $BUILTLIBS" --else LIBS="-lmpirxx $LIBS" --fi -+LIBS="-lgmp -lgmpxx $LIBS" - - if test "$PARI" = yes - then if test $BUILD_pari = no diff --git a/Macaulay2-1.6-nauty-paths.patch b/Macaulay2-1.6-nauty-paths.patch deleted file mode 100644 index efd05a1..0000000 --- a/Macaulay2-1.6-nauty-paths.patch +++ /dev/null @@ -1,48 +0,0 @@ -diff -up M2/Macaulay2/packages/NautyGraphs.m2.orig M2/Macaulay2/packages/NautyGraphs.m2 ---- M2/Macaulay2/packages/NautyGraphs.m2.orig 2013-05-15 07:54:27.000000000 -0600 -+++ M2/Macaulay2/packages/NautyGraphs.m2 2016-04-28 21:34:44.157928515 -0600 -@@ -30,9 +30,9 @@ if version#"VERSION" <= "1.4" then needs - ------------------- - - -- Check the ~/.Macaulay2/init-NautyGraphs.m2 file for the absolute path. ---- If it's not there, then use the M2-Programs directory. -+-- If it's not there, then use the system binary directory. - nauty'path = (options NautyGraphs).Configuration#"path"; --if nauty'path == "" then nauty'path = prefixDirectory | currentLayout#"programs"; -+if nauty'path == "" then nauty'path = "/usr/bin/"; - - ------------------- - -- Exports -@@ -420,7 +420,7 @@ callNauty (String, List) := List => opts - scan(graphToString \ dataList, d -> o << d << endl); - close o; - -- try to harvest the lines -- r := lines try get openIn ("!" | nauty'path | cmdStr | " <" | infn | " 2>" | erfn) -+ r := lines try get openIn ("!" | nauty'path | "nauty-" | cmdStr | " <" | infn | " 2>" | erfn) - else ( - -- nauty errored, harvest the error - e := last separate(":", first lines get openIn erfn); -diff -up M2/Macaulay2/packages/Nauty.m2.orig M2/Macaulay2/packages/Nauty.m2 ---- M2/Macaulay2/packages/Nauty.m2.orig 2013-05-15 07:54:27.000000000 -0600 -+++ M2/Macaulay2/packages/Nauty.m2 2016-04-28 21:33:22.476532361 -0600 -@@ -46,9 +46,9 @@ if version#"VERSION" <= "1.4" then ( - ------------------- - - -- Check the ~/.Macaulay2/init-Nauty.m2 file for the absolute path. ---- If it's not there, then use the M2-Programs directory. -+-- If it's not there, then use the system binary directory. - nauty'path = (options Nauty).Configuration#"path"; --if nauty'path == "" then nauty'path = prefixDirectory | currentLayout#"programs"; -+if nauty'path == "" then nauty'path = "/usr/bin/"; - - ------------------- - -- Exports -@@ -481,7 +481,7 @@ callNauty (String, List) := List => opts - scan(graphToString \ dataList, d -> o << d << endl); - close o; - -- try to harvest the lines -- r := lines try get openIn ("!" | nauty'path | cmdStr | " <" | infn | " 2>" | erfn) -+ r := lines try get openIn ("!" | nauty'path | "nauty-" | cmdStr | " <" | infn | " 2>" | erfn) - else ( - -- nauty errored, harvest the error - e := last separate(":", first lines get openIn erfn); diff --git a/Macaulay2-1.6-no_Werror.patch b/Macaulay2-1.6-no_Werror.patch deleted file mode 100644 index 7e30bdf..0000000 --- a/Macaulay2-1.6-no_Werror.patch +++ /dev/null @@ -1,35 +0,0 @@ -diff -up Macaulay2-1.6-77124166d123caab69ac4655d15b6bfab3e74496/M2/Macaulay2/c/Makefile.in.Werror Macaulay2-1.6-77124166d123caab69ac4655d15b6bfab3e74496/M2/Macaulay2/c/Makefile.in ---- Macaulay2-1.6-77124166d123caab69ac4655d15b6bfab3e74496/M2/Macaulay2/c/Makefile.in.Werror 2014-05-19 21:23:20.398800171 -0500 -+++ Macaulay2-1.6-77124166d123caab69ac4655d15b6bfab3e74496/M2/Macaulay2/c/Makefile.in 2014-05-19 21:23:28.544714641 -0500 -@@ -30,7 +30,7 @@ CPPFLAGS := -I../../include -I/include - - CFLAGS += -std=c99 - # CFLAGS += -pedantic-errors - --CFLAGS += -Wall -Werror -+CFLAGS += -Wall - ifeq "@__INTEL_COMPILER@" "no" - CFLAGS += -Wimplicit-function-declaration - endif -diff -up Macaulay2-1.6-77124166d123caab69ac4655d15b6bfab3e74496/M2/Macaulay2/d/Makefile.in.Werror Macaulay2-1.6-77124166d123caab69ac4655d15b6bfab3e74496/M2/Macaulay2/d/Makefile.in ---- Macaulay2-1.6-77124166d123caab69ac4655d15b6bfab3e74496/M2/Macaulay2/d/Makefile.in.Werror 2013-05-15 08:54:27.000000000 -0500 -+++ Macaulay2-1.6-77124166d123caab69ac4655d15b6bfab3e74496/M2/Macaulay2/d/Makefile.in 2014-05-19 21:23:57.914406259 -0500 -@@ -142,7 +142,7 @@ M2INCLUDES += -I@srcdir@/../regex - - # it's important that *our* directories get searched first: - CPPFLAGS := $(M2INCLUDES) $(CPPFLAGS) $(M2_CPPFLAGS) --CFLAGS += $(M2_CFLAGS) -Werror -+CFLAGS += $(M2_CFLAGS) - ifeq "@__INTEL_COMPILER@" "no" - CFLAGS += -Wno-unused-label - endif -@@ -156,8 +156,8 @@ endif - # CXXFLAGS += -std=c++98 - # CXXFLAGS += -pedantic-errors - --CFLAGS += -Wreturn-type -Werror --CXXFLAGS += -Wreturn-type -Werror -+CFLAGS += -Wreturn-type -+CXXFLAGS += -Wreturn-type - - python-c.o : | python-exports.h.tmp - M2lib.o scclib.o : | interp-exports.h.tmp diff --git a/Macaulay2-1.6-no_gftables.patch b/Macaulay2-1.6-no_gftables.patch deleted file mode 100644 index 46b7d8e..0000000 --- a/Macaulay2-1.6-no_gftables.patch +++ /dev/null @@ -1,12 +0,0 @@ -diff -up M2/configure.ac.no_gftables M2/configure.ac ---- M2/configure.ac.no_gftables 2013-05-20 13:48:33.721970369 -0500 -+++ M2/configure.ac 2013-05-20 13:49:15.213543210 -0500 -@@ -839,7 +839,7 @@ AC_SUBST(BUILTLIBS,) - # "missing" is our own library -- it provides unix functions (e.g., sync) missing on certain architectures (mingw); - # we always build it, and every program should link with it - # "gdbm" calls sync(), so its test programs need to link with it --AC_SUBST(PROGLIST, "4ti2 gfan normaliz nauty cddplus lrslib gftables") -+AC_SUBST(PROGLIST, "4ti2 gfan normaliz nauty cddplus lrslib") - AC_SUBST(LIBLIST, " missing gc gdbm mpir mpfr pari readline ntl factory libfac lapack frobby glpk cddlib fplll givaro fflas_ffpack linbox boost mpc qd mpack flint gtest memtailor mathic mathicgb ") - - # a library is listed in BUILD_ALWAYS if and only if we *always* build it, diff --git a/Macaulay2-1.6-optflags.patch b/Macaulay2-1.6-optflags.patch deleted file mode 100644 index a95a324..0000000 --- a/Macaulay2-1.6-optflags.patch +++ /dev/null @@ -1,22 +0,0 @@ -diff -up M2/configure.ac.optflags M2/configure.ac ---- M2/configure.ac.optflags 2013-05-20 13:44:23.010557901 -0500 -+++ M2/configure.ac 2013-05-20 13:45:51.670642322 -0500 -@@ -231,12 +231,12 @@ fi - ] - - if test "$OPTIMIZE" = yes --then CFLAGS="$CFLAGS -O2" -- CXXFLAGS="$CXXFLAGS -O2" -- FFLAGS="$FFLAGS -O2" --else CFLAGS="$CFLAGS -O0" -- CXXFLAGS="$CXXFLAGS -O0" -- FFLAGS="$FFLAGS -O0" -+then CFLAGS="-O2 $CFLAGS" -+ CXXFLAGS="-O2 $CXXFLAGS" -+ FFLAGS="-O2 $FFLAGS" -+else CFLAGS="-O0 $CFLAGS" -+ CXXFLAGS="-O0 $CXXFLAGS" -+ FFLAGS="-O0 $FFLAGS" - fi - - AC_SUBST(GCCVERSION,) diff --git a/Macaulay2-1.6-rpath.patch b/Macaulay2-1.6-rpath.patch deleted file mode 100644 index 07b4619..0000000 --- a/Macaulay2-1.6-rpath.patch +++ /dev/null @@ -1,14 +0,0 @@ -diff -up Macaulay2-1.6-77124166d123caab69ac4655d15b6bfab3e74496/M2/Macaulay2/bin/Makefile.in.rpath Macaulay2-1.6-77124166d123caab69ac4655d15b6bfab3e74496/M2/Macaulay2/bin/Makefile.in ---- Macaulay2-1.6-77124166d123caab69ac4655d15b6bfab3e74496/M2/Macaulay2/bin/Makefile.in.rpath 2014-01-16 09:32:03.417643997 -0600 -+++ Macaulay2-1.6-77124166d123caab69ac4655d15b6bfab3e74496/M2/Macaulay2/bin/Makefile.in 2013-05-15 08:54:27.000000000 -0500 -@@ -201,8 +201,8 @@ endif - ifeq (@OS@ @SHARED@,Linux yes) - ifneq (@BUILDLIST@,) - ifneq (@OBJDUMP@,) -- @OBJDUMP@ -x "$@".tmp | egrep RPATH -- @OBJDUMP@ -x "$@".tmp | egrep "RPATH +@librariesdir@$$" -+ @OBJDUMP@ -x "$@".tmp | egrep RPATH ||: -+ @OBJDUMP@ -x "$@".tmp | egrep "RPATH +@librariesdir@$$" || chrpath --replace @librariesdir@ "$@".tmp - else - echo "--warning: 'objdump' not installed, can't check rpath in M2 binary" - endif diff --git a/Macaulay2-1.6-verbose_build.patch b/Macaulay2-1.6-verbose_build.patch deleted file mode 100644 index 18a12f5..0000000 --- a/Macaulay2-1.6-verbose_build.patch +++ /dev/null @@ -1,72 +0,0 @@ -diff -up Macaulay2-1.6-77124166d123caab69ac4655d15b6bfab3e74496/M2/Macaulay2/e/Makefile.common.in.verbose Macaulay2-1.6-77124166d123caab69ac4655d15b6bfab3e74496/M2/Macaulay2/e/Makefile.common.in ---- Macaulay2-1.6-77124166d123caab69ac4655d15b6bfab3e74496/M2/Macaulay2/e/Makefile.common.in.verbose 2013-05-15 08:54:27.000000000 -0500 -+++ Macaulay2-1.6-77124166d123caab69ac4655d15b6bfab3e74496/M2/Macaulay2/e/Makefile.common.in 2013-11-25 12:53:53.705077548 -0600 -@@ -22,57 +22,57 @@ COMPILE.cpp = $(COMPILE.cc) - %.o : %.cpp - @ echo '$(COMPILE.cpp) $(OUTPUT_OPTION) $<' >> LOGFILE - @ echo " ** compiling $<" -- @ $(COMPILE.cpp) $(OUTPUT_OPTION) $< -+ $(COMPILE.cpp) $(OUTPUT_OPTION) $< - - %.s : %.cpp - @ echo '$(COMPILE.cpp) $(OUTPUT_OPTION) $<' >> LOGFILE - @ echo " ** compiling $< to assembly code, making $@" -- @ $(COMPILE.cpp) -S $(OUTPUT_OPTION) $< -+ $(COMPILE.cpp) -S $(OUTPUT_OPTION) $< - - %.E : %.cpp - @ echo '$(COMPILE.cpp) $(OUTPUT_OPTION) $<' >> LOGFILE - @ echo " ** preprocessing $<, making $@" -- @ $(COMPILE.cpp) -E $(OUTPUT_OPTION) $< -+ $(COMPILE.cpp) -E $(OUTPUT_OPTION) $< - - %.o : %.cc - @ echo '$(COMPILE.cc) $(OUTPUT_OPTION) $<' >> LOGFILE - @ echo " ** compiling $<" -- @ $(COMPILE.cc) $(OUTPUT_OPTION) $< -+ $(COMPILE.cc) $(OUTPUT_OPTION) $< - - %.s : %.cc - @ echo '$(COMPILE.cc) $(OUTPUT_OPTION) $<' >> LOGFILE - @ echo " ** compiling $< to assembly code, making $@" -- @ $(COMPILE.cc) -S $(OUTPUT_OPTION) $< -+ $(COMPILE.cc) -S $(OUTPUT_OPTION) $< - - %.E : %.cc - @ echo '$(COMPILE.cc) $(OUTPUT_OPTION) $<' >> LOGFILE - @ echo " ** preprocessing $<, making $@" -- @ $(COMPILE.cc) -E $(OUTPUT_OPTION) $< -+ $(COMPILE.cc) -E $(OUTPUT_OPTION) $< - - ntl_interface.o: ntl_interface.cpp - @ echo '$(COMPILE.cc) $(OUTPUT_OPTION) $<' >> LOGFILE - @ echo " ** compiling $<" -- @ $(COMPILE.cc) $(OUTPUT_OPTION) $< -Wno-old-style-cast -+ $(COMPILE.cc) $(OUTPUT_OPTION) $< -Wno-old-style-cast - - %.o : %.c - @ echo '$(COMPILE.c) $(OUTPUT_OPTION) $<' >> LOGFILE - @ echo " ** compiling $<" -- @ $(COMPILE.c) $(OUTPUT_OPTION) $< -+ $(COMPILE.c) $(OUTPUT_OPTION) $< - - % : %.o - @ echo '$(LINK.cc) $^ $(LOADLIBES) $(LDLIBS) $(OUTPUT_OPTION) $<' >> LOGFILE - @ echo " ** linking $^ to get $@" -- @ $(LINK.cc) $^ $(LOADLIBES) $(LDLIBS) $(OUTPUT_OPTION) -+ $(LINK.cc) $^ $(LOADLIBES) $(LDLIBS) $(OUTPUT_OPTION) - - %.dep: %.cpp - @ echo "@CXX@ -MM -MP $(CPPFLAGS) -DDEPENDS=1 $< >$*-tmp.dep && <$*-tmp.dep sed 's/\($*\)\.o[ :]*/\1.o $@ : /' >$@ && rm $*-tmp.dep" >> LOGFILE - @ echo " ** creating $@ from $<" -- @ @CXX@ -MM -MP $(CPPFLAGS) $(CXXFLAGS) -DDEPENDS=1 $< >$*-tmp.dep && <$*-tmp.dep sed 's/\($*\)\.o[ :]*/\1.o $@ : /' >$@ && rm $*-tmp.dep -+ @CXX@ -MM -MP $(CPPFLAGS) $(CXXFLAGS) -DDEPENDS=1 $< >$*-tmp.dep && <$*-tmp.dep sed 's/\($*\)\.o[ :]*/\1.o $@ : /' >$@ && rm $*-tmp.dep - - %.dep: %.c - @ echo "@CC@ -MM -MP $(CPPFLAGS) -DDEPENDS=1 $< >$*-tmp.dep && <$*-tmp.dep sed 's/\($*\)\.o[ :]*/\1.o $@ : /' >$@ && rm $*-tmp.dep" >> LOGFILE - @ echo " ** creating $@ from $<" -- @ @CC@ -MM -MP $(CPPFLAGS) -DDEPENDS=1 $< >$*-tmp.dep && <$*-tmp.dep sed 's/\($*\)\.o[ :]*/\1.o $@ : /' >$@ && rm $*-tmp.dep -+ @CC@ -MM -MP $(CPPFLAGS) -DDEPENDS=1 $< >$*-tmp.dep && <$*-tmp.dep sed 's/\($*\)\.o[ :]*/\1.o $@ : /' >$@ && rm $*-tmp.dep - - # Local Variables: - # compile-command: "make -C $M2BUILDDIR/Macaulay2/e DEPENDS=no initialize && make -C $M2BUILDDIR/Macaulay2/e Makefile.common " diff --git a/Macaulay2-rh_configure_hack.patch b/Macaulay2-rh_configure_hack.patch deleted file mode 100644 index d75fc0f..0000000 --- a/Macaulay2-rh_configure_hack.patch +++ /dev/null @@ -1,11 +0,0 @@ -diff -up Macaulay2-1.6-77124166d123caab69ac4655d15b6bfab3e74496/M2/libraries/gtest/Makefile.in.rh_configure_hack Macaulay2-1.6-77124166d123caab69ac4655d15b6bfab3e74496/M2/libraries/gtest/Makefile.in ---- Macaulay2-1.6-77124166d123caab69ac4655d15b6bfab3e74496/M2/libraries/gtest/Makefile.in.rh_configure_hack 2013-05-15 08:54:27.000000000 -0500 -+++ Macaulay2-1.6-77124166d123caab69ac4655d15b6bfab3e74496/M2/libraries/gtest/Makefile.in 2015-09-29 08:55:07.474588497 -0500 -@@ -5,6 +5,7 @@ VLIMIT = 1400000 - TLIMIT = 400 - VERSION = 1.6.0 - INSTALLCMD = rm -f $(BUILTLIBPATH)/gtest && ln -s ../gtest/$(BUILDDIR) $(BUILTLIBPATH)/gtest -+PRECONFIGURE = cp -av /usr/lib/rpm/redhat/config.sub /usr/lib/rpm/redhat/config.guess build-aux/ - include ../Makefile.library - Makefile: @srcdir@/Makefile.in ; cd ../.. && ./config.status libraries/gtest/Makefile - # Local Variables: diff --git a/Macaulay2.rpmlintrc b/Macaulay2.rpmlintrc new file mode 100644 index 0000000..8bdcf0b --- /dev/null +++ b/Macaulay2.rpmlintrc @@ -0,0 +1,23 @@ +# THIS FILE SERVES FOR WHITELISTING RPMLINT ERRORS AND WARNINGS IN TASKOTRON +# https://fedoraproject.org/wiki/Taskotron/Tasks/dist.rpmlint#Whitelisting_errors + +# Dangling symlinks; we ensure, through Requires, that they do not dangle +addFilter(r'dangling-symlink') + +# This file is included on purpose due to containing license information +addFilter(r'devel-file-in-non-devel-package .*flint\.h') + +# Test files also included on purpose +addFilter(r'devel-file-in-non-devel-package .*test/engine/factor') + +# Hidden files generated by and for the Macaulay2 documentation system +addFilter(r'hidden-file-or-dir .*\.(Certification|Headline)') + +# No man page for the target of the shell script +addFilter(r'no-manual-page-for-binary M2-binary') + +# Words not in the dictionary +addFilter(r'spelling-error .* (Grayson|Stillman)') + +# Binary file not understood by rpmlint +addFilter(r'wrong-file-end-of-line-encoding .*_cohom__Calg_lp__Normal__Toric__Variety_rp\.out') diff --git a/Macaulay2.spec b/Macaulay2.spec index 2e7db0e..5d65215 100644 --- a/Macaulay2.spec +++ b/Macaulay2.spec @@ -1,131 +1,341 @@ +# BUNDLING NOTES +# Macaulay2's memory management scheme requires close cooperation with libgc, +# and some of the supporting libraries must be compiled with special options to +# accomplish this. In particular, Macaulay2 needs: +# - mpfr configured with --disable-thread-safe +# - flint linked with the GC-enabled mpfr +# - factory (from Singular) configured with --disable-omalloc --enable-streamio +# and linked with the flint that is linked with the GC-enabled mpfr +# Since the main Fedora packages are not built in this way, we are forced to +# bundle these packages to avoid random GC-related crashes. +# +# We have to use the static versions of the libfplll and givaro libraries. +# They have global objects whose constructors run before GC is initialized. +# If we allow the shared libraries to be unloaded, which happens as a normal +# part of Macaulay2's functioning, then GC tries to free objects it did not +# allocate, which leads to a segfault. +# +# We have to bundle the linbox package. It has global constructors that cause +# the same problem as libfplll. + +%global emacscommit 524968452e95d010769ece30092edaa09d1e814f +%global emacsurl https://github.com/Macaulay2/M2-emacs +%global emacsshort %(cut -b -7 <<< %{emacscommit}) +%global m2url https://github.com/Macaulay2/M2 + # Address randomization interferes with Macaulay2's memory management scheme, # and linking with -z now breaks configure. %undefine _hardened_build -%global git 77124166d123caab69ac4655d15b6bfab3e74496 - -%global emacs_sitelisp %{_datadir}/emacs/site-lisp/ -%global xemacs_sitelisp %{_datadir}/xemacs/site-packages/lisp/ ## define to create -common subpkg #global common 1 #if 0%%{?fedora} # use system normaliz %global system_normaliz 1 #endif -%if 0%{?fedora} -%global ntl8 1 -%endif -# standardize on gmp instead of mpir (mostly for pari/sagemath) -%global gmp 1 %global ISSUE %{?fedora:Fedora-%{fedora}}%{?rhel:RedHatEnterprise-%{rhel}} %global M2_machine %{_target_cpu}-Linux-%{ISSUE} -%global INFO_FILES AdjointIdeal BeginningMacaulay2 Benchmark BGG BIBasis Binomials BoijSoederberg BooleanGB Browse Bruns ChainComplexExtras CharacteristicClasses Classic CompleteIntersectionResolutions ConvexInterface ConwayPolynomials Cyclotomic Depth DGAlgebras Dmodules EdgeIdeals Elimination EliminationMatrices EllipticIntegrals FirstPackage FormalGroupLaws FourierMotzkin FourTiTwo GenericInitialIdeal gfanInterface GraphicalModels Graphics Graphs HodgeIntegrals HyperplaneArrangements IntegralClosure InvolutiveBases Kronecker KustinMiller LexIdeals LLLBases LocalRings Macaulay2Doc MapleInterface Markov ModuleDeformations MonomialAlgebras MonomialMultiplierIdeals NAGtypes NoetherNormalization Normaliz NormalToricVarieties NumericalAlgebraicGeometry OpenMath PackageTemplate Parametrization Parsing PHCpack PieriMaps Points Polyhedra Polymake Posets PrimaryDecomposition PushForward QthPower RandomCanonicalCurves RandomCurves RandomGenus14Curves RandomObjects RandomPlaneCurves RandomSpaceCurves RationalPoints ReesAlgebra Regularity Schubert2 SchurFunctors SchurRings SCSCP Serialization SimpleDoc SimplicialComplexes SimplicialDecomposability SRdeformations StatePolytope Style SymmetricPolynomials TangentCone TensorComplexes Text ToricVectorBundles Triplets Units VersalDeformations WeylGroups XML - +# The examples contain some python files which should not be byte compiled +%global _python_bytecompile_extra 0 + +# Starting with GCC 12, Macaulay2 segfaults during the build on all +# architectures when LTO is enabled. (With GCC 11, s390x did this, but the +# other architectures did not.) Until somebody can figure out what is going +# on, disable LTO universally. +%define _lto_cflags %{nil} + Summary: System for algebraic geometry and commutative algebra Name: Macaulay2 -Version: 1.6 -Release: 32%{?dist} +Version: 1.25.11 +Release: %autorelease -License: GPLv2 or GPLv3 -URL: http://www.math.uiuc.edu/Macaulay2/ +# GPL-2.0-only OR GPL-3.0-only: +# - the project as a whole +# - factory (bundled) +# GPL-1.0-or-later: +# - Macaulay2/packages/FormalGroupLaws.m2 +# - Macaulay2/packages/WeylGroups.m2 +# GPL-2.0-only: +# - Macaulay2/packages/ModuleDeformations.m2 +# - Macaulay2/packages/QuillenSuslin.m2 +# - Macaulay2/packages/Visualize.m2 +# GPL-2.0-or-later: +# - Macaulay2/e/bibasis +# - Macaulay2/m2/computations.m2 +# - Macaulay2/packages/AlgebraicSplines.m2 +# - Macaulay2/packages/BIBasis.m2 +# - Macaulay2/packages/Binomials.m2 +# - Macaulay2/packages/Chordal.m2 +# - Macaulay2/packages/Cremona.m2 +# - Macaulay2/packages/Cyclotomic.m2 +# - Macaulay2/packages/EdgeIdeals.m2 +# - Macaulay2/packages/FourierMotzkin.m2 +# - Macaulay2/packages/GKMVarieties.m2 +# - Macaulay2/packages/GradedLieAlgebras.m2 +# - Macaulay2/packages/GraphicalModels* +# - Macaulay2/packages/Graphics.m2 +# - Macaulay2/packages/Graphs.m2 +# - Macaulay2/packages/GroebnerWalk.m2 +# - Macaulay2/packages/HyperplaneArrangements.m2 +# - Macaulay2/packages/InvariantRing* +# - Macaulay2/packages/KustinMiller.m2 +# - Macaulay2/packages/LieTypes.m2 +# - Macaulay2/packages/MonomialAlgebras.m2 +# - Macaulay2/packages/MultiprojectiveVarieties.m2 +# - Macaulay2/packages/NAGtypes.m2 +# - Macaulay2/packages/Nauty* +# - Macaulay2/packages/Normaliz.m2 +# - Macaulay2/packages/NumericalAlgebraicGeometry.m2 +# - Macaulay2/packages/PackageCitations.m2 +# - Macaulay2/packages/Posets.m2 +# - Macaulay2/packages/RationalPoints* +# - Macaulay2/packages/ResLengthThree.m2 +# - Macaulay2/packages/ResolutionsOfStanleyReisnerRings.m2 +# - Macaulay2/packages/Resultants.m2 +# - Macaulay2/packages/RunExternalM2.m2 +# - Macaulay2/packages/SLPexpressions.m2 +# - Macaulay2/packages/SLnEquivariantMatrices.m2 +# - Macaulay2/packages/SimplicialDecomposability.m2 +# - Macaulay2/packages/SparseResultants.m2 +# - Macaulay2/packages/SpecialFanoFourfolds.m2 +# - Macaulay2/packages/StatGraphs.m2 +# - Macaulay2/packages/TriangularSets.m2 +# - Macaulay2/packages/VectorFields.m2 +# GPL-3.0-or-later: +# - normaliz, when it is bundled +# - Macaulay2/e/mpreal.h +# - Macaulay2/packages/BettiCharacters.m2 +# - Macaulay2/packages/CodingTheory.m2 +# - Macaulay2/packages/FGLM.m2 +# - Macaulay2/packages/HighestWeights* +# - Macaulay2/packages/Jets.m2 +# - Macaulay2/packages/LocalRings +# - Macaulay2/packages/MonomialIntegerPrograms.m2 +# - Macaulay2/packages/MultiplierIdeals.m2 +# - Macaulay2/packages/NormalToricVarieties.m2 +# - Macaulay2/packages/NumericSolutions.m2 +# - Macaulay2/packages/OldPolyhedra.m2 +# - Macaulay2/packages/OldToricVectorBundles.m2 +# - Macaulay2/packages/PieriMaps.m2 +# - Macaulay2/packages/Polyhedra.m2 +# - Macaulay2/packages/PositivityToricBundles.m2 +# - Macaulay2/packages/SchurRings.m2 +# - Macaulay2/packages/SchurVeronese.m2 +# - Macaulay2/packages/Simplicial* +# - Macaulay2/packages/SpectralSequences.m2 +# - Macaulay2/packages/TensorComplexes.m2 +# - Macaulay2/packages/ToricTopology.m2 +# - Macaulay2/packages/ToricVectorBundles.m2 +# - Macaulay2/packages/VersalDeformations.m2 +# LGPL-2.0-or-later: +# - flint (bundled) +# - linbox (bundled) +# LGPL-3.0-or-later: +# - mpfr (bundled) +# Apache-2.0: +# - Macaulay2/packages/OpenMath.m2 +# - Macaulay2/packages/SCSCP.m2 +# MIT: +# - Macaulay2/packages/Visualize/css +# - Macaulay2/packages/Visualize/js +# MIT AND OFL-1.1-RFN: +# - Macaulay2/packages/Style +# LicenseRef-Fedora-Public-Domain: +# - Macaulay2/e/localring* +# - Macaulay2/e/mutablecomplex* +# - Macaulay2/e/NAG* +# - Macaulay2/e/SLP* +# - Macaulay2/packages/Depth.m2 +# - Macaulay2/packages/Divisor.m2 +# - Macaulay2/packages/FastMinors.m2 +# - Macaulay2/packages/LatticePolytopes.m2 +# - Macaulay2/packages/NoetherNormalization.m2 +# - Macaulay2/packages/RationalMaps.m2 +# - Macaulay2/packages/SectionRing.m2 +License: (GPL-2.0-only OR GPL-3.0-only) AND GPL-1.0-or-later AND GPL-2.0-only AND GPL-2.0-or-later AND GPL-3.0-or-later AND LGPL-2.0-or-later AND LGPL-3.0-or-later AND Apache-2.0 AND MIT AND OFL-1.1-RFN AND LicenseRef-Fedora-Public-Domain +URL: https://macaulay2.com/ +VCS: git:%{m2url}.git %if 0%{?snap:1} -Source0: Macaulay2-%{version}-%{snap}.tar.xz +Source0: %{name}-%{version}-%{snap}.tar.xz %else -Source0: http://www.math.uiuc.edu/Macaulay2/Downloads/SourceCode/Macaulay2-%{version}-%{git}-src.tar.bz2 +Source0: %{m2url}/archive/release-%{version}/%{name}-%{version}.tar.gz %endif +Source1: %{emacsurl}/tarball/%{emacscommit}/M2-emacs-%{emacsshort}.tar.gz -Source10: Macaulay2.png -Source11: Macaulay2.desktop +# Various sizes of the planets icon from macaulay2.com. See README.icons in +# the tar file for details on how these icons were created. +Source10: Macaulay2-icons.tar.xz +Source11: com.macaulay2.macaulay2.desktop +Source12: com.macaulay2.macaulay2.metainfo.xml Source20: etags.sh ## BUNDLED code -#global _enable_frobby --enable-frobby -%if 0%{?_enable_frobby:1} -Source100: http://www.math.uiuc.edu/Macaulay2/Downloads/OtherSourceCode/1.6/frobby_v0.9.0.tar.gz -Provides: bundled(frobby) = 0.9.0 -%endif -# used in tests only -Source101: http://www.math.uiuc.edu/Macaulay2/Downloads/OtherSourceCode/1.6/gtest-1.6.0.tar.gz -%if ! 0%{?system_normaliz} -Source102: http://www.math.uiuc.edu/Macaulay2/Downloads/OtherSourceCode/1.6/Normaliz2.9.zip +# Normaliz must sometimes be bundled due to version differences +%if ! %system_normaliz +%global normalizver 3.11.0 +Source100: http://www.math.uiuc.edu/Macaulay2/Downloads/OtherSourceCode/normaliz-%{normalizver}.tar.gz +Provides: bundled(normaliz) = %{normalizver} %endif -Patch0: Macaulay2-1.6-optflags.patch -Patch1: Macaulay2-1.4-xdg_open.patch -Patch2: Macaulay2-1.6-verbose_build.patch -# fix paths to nauty binaries -Patch3: Macaulay2-1.6-nauty-paths.patch -# drop 'tests' from default make target -Patch4: Macaulay2-1.6-default_make_targets.patch -# disable check for gftables -Patch5: Macaulay2-1.6-no_gftables.patch -# don't use -Werror -Patch6: Macaulay2-1.6-no_Werror.patch -# link to gmp, not mpir to avoid possible issues with gmp'ed pari -Patch9: Macaulay2-1.6-mpir.patch -Patch11: Macaulay2-1.6-disable_broken_debug_functions.patch -# fix rpath, no idea how prefix/libdir is sneaking in there -Patch12: Macaulay2-1.6-rpath.patch -# fix build against newer gc -# https://github.com/Macaulay2/M2/issues/130 -Patch13: Macaulay2-1.6-gc.patch -# fix gtest FTBFS on aarch64 -Patch14: Macaulay2-rh_configure_hack.patch +# MPFR is bundled because it must be built with different threading options +%global mpfrver 4.2.2 +Source101: https://www.mpfr.org/mpfr-%{mpfrver}/mpfr-%{mpfrver}.tar.gz +Provides: bundled(mpfr) = %{mpfrver} + +# FLINT is bundled because it must be linked with the specially-built MPFR +%global flintver 3.3.1 +Source102: https://github.com/flintlib/flint/archive/v%{flintver}/flint-%{flintver}.tar.gz +Provides: bundled(flint) = %{flintver} + +# FACTORY is bundled because it must be built with special options +%global factoryver 4.4.1 +Source103: https://www.singular.uni-kl.de/ftp/pub/Math/Factory/factory-%{factoryver}.tar.gz +Provides: bundled(factory) = %{factoryver} + +# LINBOX is bundled because it introduces static global objects +%global linboxver 1.7.1 +Source104: https://github.com/linbox-team/linbox/releases/download/v%{linboxver}/linbox-%{linboxver}.tar.gz +Provides: bundled(linbox) = %{linboxver} + +## PATCHES FOR BUNDLED code +# No patches + +## FAKE library tarballs that convince Macaulay2 to use the system versions +Source300: frobby_v0.9.5.tar.gz +Source301: cddlib-094m.tar.gz +# lapack +Source302: v3.12.1.tar.gz +Source303: 4ti2-1.6.13.tar.gz +Source304: fplll-5.5.0.tar.gz +Source305: gfan0.6.2.tar.gz +Source306: givaro-4.2.1.tar.gz +Source307: lrslib-073.tar.gz +Source308: TOPCOM-1.1.2.tar.gz +Source309: cohomCalg-0.32.tar.gz +Source310: glpk-5.0.tar.gz +Source311: Csdp-6.2.0.tgz +Source312: mpsolve-3.2.3.tar.gz +# msolve +%global msolvever 0.9.2 +Source313: v%{msolvever}.tar.gz + +# let Fedora optflags override the defaults +Patch: %{name}-1.25-optflags.patch +# give the build a little more time and space than upstream permits +Patch: %{name}-1.16-ulimit.patch +# drop checking of html links from default make target +Patch: %{name}-1.25-default_make_targets.patch +# do not override the debug level +Patch: %{name}-1.17-configure.patch +# Fix LTO warnings about mismatched declarations and definitions +Patch: %{name}-1.18-lto.patch BuildRequires: 4ti2 +BuildRequires: appstream BuildRequires: autoconf +BuildRequires: autoconf-archive BuildRequires: bison -BuildRequires: blas-devel BuildRequires: boost-devel -BuildRequires: cddlib-devel cddlib-static BuildRequires: chrpath +BuildRequires: cmake +BuildRequires: cohomCalg +BuildRequires: csdp-tools BuildRequires: desktop-file-utils +BuildRequires: diffutils %if 0%{?fedora} BuildRequires: doxygen-latex %else BuildRequires: doxygen %endif +BuildRequires: e-antic-devel +BuildRequires: eigen3-static # etags -BuildRequires: emacs-common +BuildRequires: emacs +BuildRequires: factory-gftables BuildRequires: flex -BuildRequires: flint-devel BuildRequires: gawk BuildRequires: gcc-c++ BuildRequires: gcc-gfortran +BuildRequires: gdb BuildRequires: gdbm-devel +BuildRequires: gettext-devel BuildRequires: gfan +BuildRequires: git-core +BuildRequires: givaro-static BuildRequires: glpk-devel -%if 0%{?gmp} -BuildRequires: gmp-devel -%else -BuildRequires: mpir-devel -%endif +BuildRequires: iml-devel BuildRequires: info -BuildRequires: factory-static factory-devel >= 3.1.6 -BuildRequires: factory-gftables -BuildRequires: libatomic_ops-devel -BuildRequires: libfac-static libfac-devel >= 3.1.6 -BuildRequires: lapack-devel -BuildRequires: mpfr-devel gmp-devel +BuildRequires: libappstream-glib +BuildRequires: libatomic +BuildRequires: libfplll-static +BuildRequires: libfrobby-devel +BuildRequires: libgfan-devel +BuildRequires: libnormaliz-devel >= 3.10.4 +BuildRequires: libtool +BuildRequires: lrslib-devel +BuildRequires: lrslib-utils +BuildRequires: make +BuildRequires: mpsolve-devel +BuildRequires: msolve +BuildRequires: msolve-devel BuildRequires: nauty -BuildRequires: ntl-devel >= 5.5 +BuildRequires: normaliz +BuildRequires: ocl-icd-devel BuildRequires: pari-devel -BuildRequires: pkgconfig(bdw-gc) >= 6.2 +BuildRequires: pkgconfig(bdw-gc) >= 8.2.6 +BuildRequires: pkgconfig(cddlib) +BuildRequires: pkgconfig(expat) +BuildRequires: pkgconfig(fflas-ffpack) +BuildRequires: pkgconfig(flexiblas) +BuildRequires: pkgconfig(gmp) +BuildRequires: pkgconfig(gtest) +BuildRequires: pkgconfig(libffi) +BuildRequires: pkgconfig(libmariadb) +BuildRequires: pkgconfig(libnauty) BuildRequires: pkgconfig(libxml-2.0) +BuildRequires: pkgconfig(m4ri) +BuildRequires: pkgconfig(m4rie) +BuildRequires: pkgconfig(mathic) +BuildRequires: pkgconfig(mathicgb) +BuildRequires: pkgconfig(memtailor) +BuildRequires: pkgconfig(mpfi) BuildRequires: pkgconfig(ncurses) -BuildRequires: python2 -BuildRequires: readline-devel +BuildRequires: pkgconfig(ntl) +BuildRequires: pkgconfig(qd) +BuildRequires: pkgconfig(readline) +BuildRequires: pkgconfig(tbb) +BuildRequires: pkgconfig(tinyxml2) +BuildRequires: polymake +BuildRequires: python3-devel +BuildRequires: R +BuildRequires: scip +BuildRequires: texinfo BuildRequires: time +BuildRequires: TOPCOM +BuildRequires: transfig +%ifarch %{valgrind_arches} +BuildRequires: valgrind +%endif Requires: 4ti2 -Requires: gfan +Requires: cohomCalg +Requires: csdp-tools +Requires: emacs-filesystem Requires: factory-gftables +Requires: gfan +Requires: hicolor-icon-theme +Requires: lrslib-utils Requires: nauty -%if 0%{?system_normaliz} -BuildRequires: normaliz >= 2.9 -Requires: normaliz >= 2.9 -%endif +Requires: normaliz +Requires: TOPCOM + +# M2-help +Requires: xdg-utils + +Recommends: mathicgb +Recommends: msolve +Recommends: scip %if 0%{?common} Requires: %{name}-common = %{version}-%{release} @@ -140,15 +350,20 @@ Provides: Macaulay2-emacs = %{version}-%{release} Provides: macaulay2 = %{version}-%{release} -# M2-help -Requires: xdg-utils -Requires(post): /sbin/install-info -Requires(preun): /sbin/install-info +# See https://fedoraproject.org/wiki/Changes/EncourageI686LeafRemoval +# Macaulay2 takes more than 14 hours to build on ppc64le, more than twice as +# long as the x86_64 build, and it is doubtful that anyone will ever use it on +# that platform anyway. +ExcludeArch: %{ix86} %{power64} + +# Do not advertise the bundled mpfr +%global __provides_exclude libmpfr.so* + %description Macaulay 2 is a new software system devoted to supporting research in -algebraic geometry and commutative algebra written by Daniel R. Grayson -and Michael E. Stillman +algebraic geometry and commutative algebra written by Daniel R. Grayson and +Michael E. Stillman. %package common Summary: Common files for %{name} @@ -159,608 +374,225 @@ BuildArch: noarch %prep -%setup -q -n %{name}-%{version}-%{git}/M2 +%setup -q -n M2-release-%{version}/M2 +%setup -q -n M2-release-%{version}/M2 -T -D -a 10 +tar -C Macaulay2/editors/emacs --strip-components=1 -xzf %{SOURCE1} install -p -m755 %{SOURCE20} ./etags +## TODO: Remove this when Fedora moves to normaliz 3.11.0 +sed -i 's/3\.11\.0/3.10.5/' libraries/normaliz/Makefile.in + ## bundled code -mkdir -p BUILD/tarfiles/ -%if 0%{?_enable_frobby:1} -install -p %{SOURCE100} BUILD/tarfiles/ -%endif -install -p %{SOURCE101} BUILD/tarfiles/ -%if ! 0%{?system_normaliz} -install -p %{SOURCE102} BUILD/tarfiles/ -%endif -%if 0%{?factory} -install -p %{SOURCE103} %{SOURCE104} %{SOURCE105} BUILD/tarfiles/ +%if ! %system_normaliz +install -p -m644 %{SOURCE100} BUILD/tarfiles/ %endif +install -p -m644 %{SOURCE101} %{SOURCE102} %{SOURCE103} BUILD/tarfiles/ +install -p -m644 %{SOURCE104} BUILD/tarfiles/v%{linboxver}.tar.gz +sed -i 's/\(VERSION = \).*/\1%{mpfrver}/' libraries/mpfr/Makefile.in +sed -e 's/\(VERSION = \).*/\1%{linboxver}/' \ + -e 's,--with-gmp.*,--without-archnative GIVARO_CFLAGS=-I$(LIBRARIESDIR) GIVARO_LIBS="%{_libdir}/libgivaro.a",' \ + -i libraries/linbox/Makefile.in -%patch0 -p1 -b .optflags -%patch1 -p1 -b .xdg_open -%patch2 -p2 -b .verbose_build -%patch3 -p1 -b .nauty -%patch4 -p1 -b .default_make_targets -%patch5 -p1 -b .no_gftables -%patch6 -p2 -b .no_Werror -%if 0%{?gmp} -%patch9 -p1 -b .mpir -%endif -%if ! 0%{?factory} -%patch11 -p2 -b .disable_broken_debug_functions -# factory-gftables symlink -mkdir -p BUILD/%{_target_platform}/StagingArea/common/share/Macaulay2/Core -pushd BUILD/%{_target_platform}/StagingArea/common/share/Macaulay2/Core -ln -s /usr/share/factory/gftables factory -popd -%endif -%patch12 -p2 -b .rpath -%patch13 -p2 -b .gc -%patch14 -p2 -b .rh_configure_hack +## patches for bundled code +sed -e 's,--disable-shared,& --disable-arch --with-blas-include=%{_includedir}/flexiblas --with-ntl-include=%{_includedir}/NTL,' \ + -e 's/3\.2\.1/%{flintver}/' \ + -e 's/\(LICENSEFILES = \).*/\1COPYING COPYING.LESSER/' \ + -e 's/-pedantic-errors/& -fno-strict-aliasing/' \ + -e "s,PRECONFIGURE.*,& \&\& sed -i 's/openblas/flexiblas/' configure," \ + -i libraries/flint/Makefile.in -# autofoo config love, since we're not using %%configure (yet) -# see also http://bugzilla.redhat.com/926110 -for i in $(find . -name config.guess -o -name config.sub) ; do - [ -f /usr/lib/rpm/redhat/$(basename $i) ] && %{__rm} -f $i && %{__cp} -fv /usr/lib/rpm/redhat/$(basename $i) $i ; -done +## fake library tarballs +install -p -m644 %{SOURCE300} %{SOURCE301} %{SOURCE302} %{SOURCE303} \ + %{SOURCE304} %{SOURCE305} %{SOURCE306} %{SOURCE307} %{SOURCE308} \ + %{SOURCE309} %{SOURCE310} %{SOURCE311} %{SOURCE312} %{SOURCE313} \ + BUILD/tarfiles/ +sed -i '/PRECONFIGURE/d' libraries/{4ti2,cddlib,givaro,normaliz,topcom}/Makefile.in +sed -i '/PATCHFILE/d' libraries/{csdp,frobby,gfan,givaro,mpsolve,normaliz,topcom}/Makefile.in +sed -i '/INSTALLCMD/,/stdinc/d' libraries/frobby/Makefile.in +sed -i 's,install \(lib.*\.a\),ln -s %{_libdir}/\1,' libraries/lapack/Makefile.in + +## fake givaro submodule +tar -C submodules/givaro --strip-components=1 -xzf %{SOURCE306} + +## flint submodule +tar -C submodules/flint --strip-components=1 -xzf %{SOURCE102} + +%autopatch -p1 + + +%conf +# repeatable builds: inject a node name +sed -i 's,`uname -n`,build.fedoraproject.org,' configure.ac + +# gdb is used during the build; let it autoload some files +if [ "$HOME" = "/builddir" ]; then + echo "set auto-load safe-path /" > /builddir/.gdbinit +fi + +# Use, but don't build, cddlib, fflas-ffpack, and gc. Use the static versions +# of libfplll and givaro. Link with flexiblas instead of the reference blas +# and lapack. Fix typos. +sed -e 's/BUILD_cddlib=yes/BUILD_cddlib=no/' \ + -e 's/BUILD_gc=yes/BUILD_gc=no/' \ + -e 's/BUILD_fflas_ffpack=yes/BUILD_fflas_ffpack=no/' \ + -e 's,-lfplll,%{_libdir}/libfplll.a -lqd,' \ + -e 's,`\$PKG_CONFIG --libs givaro`,%{_libdir}/libgivaro.a,' \ + -e 's,-lgivaro,%{_libdir}/libgivaro.a,' \ + -e 's,-lrefblas,-lflexiblas,' \ + -e 's,-llapack,-lflexiblas,' \ + -e 's,\$added_fclibs != yes,"$added_fclibs" != yes,' \ + -i configure.ac + +# Do not try to download tarballs +sed -i '/^fetch: download-enabled/d' libraries/Makefile.library.in + +# Do not try to fetch sources with git +sed -i 's/^\(fetch:\) update-submodule/\1/' libraries/Makefile.library.in + +# All examples should produce expected results on x86_64. Other platforms +# sometimes encounter problems; e.g., due to differences in rounding error of +# floating point numbers. +%ifnarch %{x86_64} +sed -e '/^IgnoreExampleErrors/s/false/true/' \ + -e '/^CheckDocumentation/s/true/false/' \ + -i Macaulay2/packages/Makefile.in +%endif # (re)generate configure -[ -f configure -a -f include/config.h ] || make - -%if 0%{?ntl8} -# Adapt to ntl 8.* -sed -i.orig 's/a\.rep/\&a/;s/result\.rep/static_cast(&)/' \ - Macaulay2/e/ntl-internal.cpp -%endif - -# helper binaries (4ti2, normaliz) -mkdir -p BUILD/%{_target_platform}/StagingArea/%{M2_machine}/libexec/Macaulay2/%{M2_machine} -pushd BUILD/%{_target_platform}/StagingArea/%{M2_machine}/libexec/Macaulay2/%{M2_machine} -for bin in %{_libdir}/4ti2/bin/* %{?system_normaliz:%{_bindir}/normaliz} ; do -if [ -x "${bin}" ]; then - ln -s "${bin}" -else - echo "WARNING: target ${bin} not executable!" -fi -done -popd +autoreconf -fi . %build - -# We need /sbin:. in PATH to find install-info,etags -PATH=/sbin:$(pwd):$PATH; export PATH +# Let the configure script find lrslib utilities +module load lrslib-%{_arch} ## configure macro currently broken, due to some odd prefix-checks. probably fixable -- Rex mkdir -p BUILD/%{_target_platform} -pushd BUILD/%{_target_platform} -%{!?factory:CPPFLAGS="-I%{_includedir}/factory"} \ -CFLAGS="%{optflags}" \ -CXXFLAGS="%{optflags}" \ -LDFLAGS="$RPM_LD_FLAGS" \ -LIBS="-lflint" \ +cd BUILD/%{_target_platform} +CPPFLAGS="$CPPFLAGS -I%{_includedir}/cddlib -I%{_includedir}/frobby" \ +CFLAGS='%{build_cflags} -fsigned-char' \ +CXXFLAGS='%{build_cflags} -fsigned-char' \ +LIBS="-lflexiblas" \ ../../configure \ --build=%{_build} \ --host=%{_host} \ --with-issue=%{ISSUE} \ --prefix=%{_prefix} \ - --disable-dumpdata \ --enable-shared \ - --disable-fc-lib-ldflags \ --disable-strip \ - %{?_enable_frobby}%{!?_enable_frobby:--disable-frobby} \ - --with-unbuilt-programs="cddplus gfan 4ti2 lrslib nauty %{?system_normaliz:normaliz}" -popd + --enable-linbox \ + --with-blas=flexiblas \ + --with-lapack=flexiblas \ + --with-system-libs \ + --with-unbuilt-programs="cddplus nauty" \ + --enable-build-libraries="mpfr flint factory lapack fplll givaro linbox" + # The list of libraries and submodules above should include only those that: + # 1. We bundle (mpfr, flint, factory, and linbox) + # 2. We sneakily substitute one library for another (lapack -> flexiblas) + # 3. Have to be linked with the static library (fplll and givaro) +cd - -make Verbose=true -C BUILD/%{_target_platform} IgnoreExampleErrors=true +# link with static libraries when global constructors run prior to GC +# initialization. Otherwise, unloading the shared object causes a crash. +# We have to do this because we pick up references to -lgivaro from other +# packages during the configure script execution. +for fil in $(grep -Erl -e '-lfplll|-lgivaro' .); do + sed -e 's,-lfplll,%{_libdir}/libfplll.a,' \ + -e 's,-lgivaro,%{_libdir}/libgivaro.a,' \ + -i.orig $fil + touch -r $fil.orig $fil + rm -f $fil.orig +done + +# Do not try to checkout submodules with git +mkdir -p BUILD/%{_target_platform}/libraries/{flint,givaro} +touch BUILD/%{_target_platform}/libraries/{flint,givaro}/.submodule-updated + +# Build +make -C BUILD/%{_target_platform} VERBOSE=true Verbose=true IgnoreExampleErrors=true # log errors find BUILD/%{_target_platform}/ -name *.errors -execdir echo {} \; -execdir cat {} \; %install +%make_install -C BUILD/%{_target_platform} IgnoreExampleErrors=true -make install DESTDIR=%{buildroot} -C BUILD/%{_target_platform} IgnoreExampleErrors=true +# link, don't copy, the binaries +mbindir=%{buildroot}%{_libexecdir}/Macaulay2/bin +for fil in checkregularity chiro2circuits chiro2cocircuits cohomcalg csdp lrs \ + normaliz points2allfinetriangs points2alltriangs points2chiro \ + points2finetriang points2finetriangs points2flips points2nallfinetriangs \ + points2nalltriangs points2nfinetriangs points2nflips points2ntriangs \ + points2triangs points2volume; do + rm -f $mbindir/$fil + ln -s %{_bindir}/$fil $mbindir/$fil +done + +# unbundle factory-gftables +rm -fr %{buildroot}%{_datadir}/Macaulay2/Core/factory +ln -s ../../factory %{buildroot}%{_datadir}/Macaulay2/Core # app img -install -p -m644 -D %{SOURCE10} \ - %{buildroot}%{_datadir}/icons/hicolor/32x32/apps/Macaulay2.png +for sz in 64 72 96 128 192 256 512; do + sz2=${sz}x${sz} + mkdir -p %{buildroot}%{_datadir}/icons/hicolor/$sz2/apps + install -p -m644 icons/NinePlanets-${sz2}.png \ + %{buildroot}%{_datadir}/icons/hicolor/$sz2/apps/%{name}.png +done desktop-file-install --vendor="" \ --dir=%{buildroot}%{_datadir}/applications \ %{SOURCE11} -# Make a new home for emacs files -mkdir -p %{buildroot}%{_datadir}/Macaulay2/emacs -mv %{buildroot}%{emacs_sitelisp}/M2*.el %{buildroot}%{_datadir}/Macaulay2/emacs/ - -for dir in %{emacs_sitelisp} %{xemacs_sitelisp} ; do - install -d -m755 %{buildroot}$dir - pushd %{buildroot}%{_datadir}/Macaulay2/emacs - for file in M2*.el ; do - ln -s %{_datadir}/Macaulay2/emacs/$file %{buildroot}$dir - touch %{buildroot}$dir/`basename $file .el`.elc - done - popd -done +mkdir -p %{buildroot}%{_metainfodir} +install -pm 644 %{SOURCE12} %{buildroot}%{_metainfodir} +# Still required by guidelines for now +# (https://pagure.io/packaging-committee/issue/1053): +appstream-util validate-relax --nonet \ + %{buildroot}%{_metainfodir}/com.macaulay2.macaulay2.metainfo.xml +# Matches what gnome-software and others use: +appstreamcli validate --no-net --explain \ + %{buildroot}%{_metainfodir}/com.macaulay2.macaulay2.metainfo.xml + +# Byte compile the Emacs files, and move the documentation +cd %{buildroot}%{_emacs_sitelispdir}/macaulay2 +mv M2-emacs* %{buildroot}%{_pkgdocdir} +mv README.md %{buildroot}%{_pkgdocdir}/README-emacs.md +%{_emacs_bytecompile} *.el +cd - ## unpackaged files # info dir rm -fv %{buildroot}%{_infodir}/dir -# Empty files - indicating test passes -rm -fv %{buildroot}%{_datadir}/%{name}/Macaulay2Doc/basictests/*.okay %check -time make -k check -C BUILD/%{_target_platform} ||: +# The test suite has grown to the point where it takes many hours to run. +# Just run the most basic tests. +make check -C BUILD/%{_target_platform}/Macaulay2/e +make check -C BUILD/%{_target_platform}/Macaulay2/bin -%post -touch --no-create %{_datadir}/icons/hicolor ||: -for info_file in %{INFO_FILES} -do - /sbin/install-info --quiet %{_infodir}/${info_file}.info %{_infodir}/dir ||: -done - -%preun -if [ $1 -eq 0 ]; then - for info_file in %{INFO_FILES} - do - /sbin/install-info --delete --quiet %{_infodir}/${info_file}.info %{_infodir}/dir 2> /dev/null ||: - done -fi - -%postun -if [ $1 -eq 0 ] ; then -touch --no-create %{_datadir}/icons/hicolor ||: -gtk-update-icon-cache -q %{_datadir}/icons/hicolor > /dev/null 2>&1 ||: -fi - -%posttrans -gtk-update-icon-cache -q %{_datadir}/icons/hicolor > /dev/null 2>&1 ||: - -%triggerin -- emacs-common -if [ -d %{emacs_sitelisp} ]; then - for file in %{_datadir}/Macaulay2/emacs/M2*.el ; do - ln -sf $file %{emacs_sitelisp}/ ||: - done -fi - -%triggerin -- xemacs-common -if [ -d %{xemacs_sitelisp} ]; then - for file in %{_datadir}/Macaulay2/emacs/M2*.el ; do - ln -sf $file %{xemacs_sitelisp}/ ||: - done -fi - -%triggerun -- emacs-common -[ $2 -eq 0 ] && rm -f %{emacs_sitelisp}/M2*.el* || : - -%triggerun -- xemacs-common -[ $2 -eq 0 ] && rm -f %{xemacs_sitelisp}/M2*.el* || : - %files %{_bindir}/M2 -%{_datadir}/applications/*Macaulay2.desktop -%{_datadir}/icons/hicolor/*/*/* -%{_infodir}/*.info* -%dir %{_prefix}/lib/Macaulay2/ -%{_prefix}/lib/Macaulay2/%{M2_machine} -%dir %{_libexecdir}/Macaulay2/ -%{_libexecdir}/Macaulay2/%{M2_machine} -%{_mandir}/man1/* -%ghost %{emacs_sitelisp} -%ghost %{xemacs_sitelisp} +%{_bindir}/M2-binary +%{_prefix}/lib/Macaulay2/ +%{_libexecdir}/Macaulay2/ %if 0%{?common} %files common %endif %{_datadir}/Macaulay2/ +%{_datadir}/applications/com.macaulay2.macaulay2.desktop +%{_datadir}/icons/hicolor/*/*/* +%{_metainfodir}/com.macaulay2.macaulay2.metainfo.xml %{_docdir}/Macaulay2/ +%{_infodir}/*.info* +%{_mandir}/man1/* +%{_emacs_sitelispdir}/macaulay2/ %changelog -* Thu Oct 20 2016 Jerry James - 1.6-32 -- Rebuild for ntl 10.1.0 - -* Mon Sep 5 2016 Jerry James - 1.6-31 -- Rebuild for ntl 9.11.0 - -* Fri Aug 12 2016 Jerry James - 1.6-30 -- Rebuild for fflas-ffpack 2.2.2, givaro 4.0.2, and linbox 1.4.2 - -* Mon Jul 25 2016 Jerry James - 1.6-29 -- Rebuild for ntl 9.10.0 - -* Thu Jun 2 2016 Jerry James - 1.6-28 -- Rebuild for ntl 9.9.1 - -* Fri Apr 29 2016 Jerry James - 1.6-27 -- Rebuild for ntl 9.8.0 -- Nauty is now available -- Drop -gcc-template-bug patch; gcc bug has been fixed - -* Sat Mar 19 2016 Jerry James - 1.6-26 -- Rebuild for ntl 9.7.0 - -* Sat Feb 20 2016 Jerry James - 1.6-25 -- Rebuild for ntl 9.6.4 -- Add -gcc-template-bug patch to work around gcc bug (bz 1307282) - -* Wed Feb 03 2016 Fedora Release Engineering - 1.6-24 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild - -* Thu Jan 14 2016 Jonathan Wakely - 1.6-23 -- Rebuilt for Boost 1.60 - -* Fri Dec 4 2015 Jerry James - 1.6-22 -- Rebuild for ntl 9.6.2 -- Add python2 BR for the tests - -* Sat Oct 17 2015 Kalev Lember - 1.6-21 -- Rebuilt for libntl soname bump - -* Fri Oct 16 2015 Jerry James - 1.6-20 -- Rebuild for ntl 9.4.0 - -* Tue Sep 29 2015 Rex Dieter 1.6-19 -- refresh config.guess/config.sub hack, fix FTBFS on aarch64 - -* Sat Sep 19 2015 Jerry James - 1.6-18 -- Rebuild for flint 2.5.2 and ntl 9.3.0 - -* Thu Aug 27 2015 Jonathan Wakely - 1.6-17 -- Rebuilt for Boost 1.59 - -* Wed Jul 29 2015 Fedora Release Engineering - 1.6-16 -- Rebuilt for https://fedoraproject.org/wiki/Changes/F23Boost159 - -* Wed Jul 22 2015 David Tardon - 1.6-15 -- rebuild for Boost 1.58 - -* Tue Jun 16 2015 Fedora Release Engineering - 1.6-14 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild - -* Mon May 18 2015 Jerry James - 1.6-13 -- Rebuild for ntl 9.1.1 and cddlib-094h - -* Fri May 15 2015 Jerry James - 1.6-12 -- Bump and rebuild - -* Sat May 9 2015 Jerry James - 1.6-11 -- Rebuild for ntl 9.1.0 - -* Mon Feb 2 2015 Jerry James - 1.6-10 -- Rebuild for ntl 8.1.2 - -* Mon Jan 26 2015 Petr Machata - 1.6-9 -- Rebuild for boost 1.57.0 - -* Thu Jan 15 2015 Jerry James - 1.6-8 -- Rebuild for ntl 8.1.0 -- Fix the desktop file name - -* Wed Oct 29 2014 Jerry James - 1.6-7 -- Rebuild for ntl 6.2.1 -- Revert Apr 8 HTML creation timeout, now handled upstream -- Revert use of -common subpkg; various arches timeout differently - -* Wed Sep 24 2014 Rex Dieter 1.6-6 -- enable -common subpkg (to be more compatible with upstream packaging) - -* Fri Aug 15 2014 Fedora Release Engineering - 1.6-5 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild - -* Wed Jun 25 2014 Rex Dieter 1.6-4 -- restore --build/--host configure options lost in 1.6 update, should help arm - -* Fri Jun 06 2014 Fedora Release Engineering - 1.6-3 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_Mass_Rebuild - -* Fri May 23 2014 Petr Machata - 1.6-2 -- Rebuild for boost 1.55.0 - -* Mon May 19 2014 Rex Dieter 1.6-1 -- Macaulay2-1.6 (#1074594) -- ExcludeArch: %%arm (#1099598) - -* Wed May 14 2014 Rex Dieter 1.5-8 -- rebuild (gc) - -* Tue Apr 8 2014 Jerry James - 1.5-7 -- Build for all arches -- Increase HTML creation timeouts for slower processors, such as ARM -- Add --build and --host invocations to configure to fix mismatched ARM names - -* Wed Apr 2 2014 Jerry James - 1.5-6 -- Rebuild for ntl 6.1.0 - -* Fri Mar 21 2014 Jerry James - 1.5-5 -- The normaliz patch was used; bring it back -- Complete the removal of the system_normaliz variable -- Link with RPM_LD_FLAGS -- Due to use of a static library, explicitly link with -lflint - -* Fri Jan 24 2014 Rex Dieter - 1.5-5 -- drop unused patches (4ti2, normalize) - -* Tue Jan 21 2014 Rex Dieter - 1.5-4 -- utilize %%_libexecdir/Macaulay2/... for helper/system binaries -- libdir: %%_libdir => %%_prefix/lib -- -common subpkg option (not used yet) - -* Tue Jan 14 2014 Jerry James - 1.5-3 -- Update normaliz interface for normaliz 2.8 and later - -* Tue Jul 30 2013 Petr Machata - 1.5-2 -- Rebuild for boost 1.54.0 - -* Thu May 23 2013 Rex Dieter 1.5-1 -- Release: 1 (using non-snapshot release tarball now) - -* Tue May 21 2013 Rex Dieter - 1.5-0.7.20130401 -- update to 20130401 r15955 snapshot release -- (Build)Requires: factory-gftables (see bug #965655) -- refresh INFO_FILES content - -* Mon May 6 2013 Jerry James - 1.5-0.6.20130214 -- Rebuild for m4ri 20130416 - -* Fri Feb 15 2013 Rex Dieter 1.5-0.5.20130214 -- r15838 (20130214 snapshot) - -* Wed Feb 13 2013 Rex Dieter 1.5-0.4.20120807 -- BR: doxygen-latex - -* Wed Feb 13 2013 Fedora Release Engineering - 1.5-0.3.20120807 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_19_Mass_Rebuild - -* Tue Aug 07 2012 Rex Dieter 1.5-0.2.20120807 -- 1.5 20120807 r15022 snapshot - -* Thu Jul 19 2012 Rex Dieter 1.4-9 -- rebuild against (Singular's) libfac/factory 3.1.3 - -* Wed Jul 18 2012 Fedora Release Engineering - 1.4-8 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_18_Mass_Rebuild - -* Tue Jul 03 2012 Rex Dieter 1.4-7 -- rebuild (pari) - -* Sun Jul 1 2012 pcpa - 1.4-6 -- Link to gmp not mpir. -- Rebuild with pari 2.5. - -* Wed May 30 2012 Rex Dieter -- 1.4-5 -- License: GPLv2 or GPLv3 (#821036) -- pkgconfig-style deps - -* Tue Feb 28 2012 Fedora Release Engineering - 1.4-4 -- Rebuilt for c++ ABI breakage - -* Thu Jan 12 2012 Fedora Release Engineering - 1.4-3 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_17_Mass_Rebuild - -* Fri Sep 30 2011 Rex Dieter 1.4-2 -- rebuild (gdbm) - -* Thu May 26 2011 Rex Dieter 1.4-1 -- 1.4 - -* Thu May 26 2011 Rex Dieter 1.3.1-9 -- Typo in INFO_FILES (#708086) - -* Mon Feb 07 2011 Fedora Release Engineering - 1.3.1-8 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_15_Mass_Rebuild - -* Wed Jun 30 2010 Rex Dieter - 1.3.1-7 -- BR: cddlib-static (#609698) - -* Tue Mar 16 2010 Rex Dieter - 1.3.1-6 -- rebuild (factory/libfac) - -* Tue Mar 16 2010 Mark Chappell - 1.3.1-5 -- Run install-info on all of the .info files we installed -- Re-enable the now functional ppc64 build - -* Wed Mar 10 2010 Mark Chappell - 1.3.1-4 -- Add in missing Requires runtime dependancies - -* Wed Mar 10 2010 Mark Chappell - 1.3.1-3 -- GPLv3/GPLv2 conflict, use compat-readline5 - bz#511299 - -* Tue Mar 09 2010 Mark Chappell - 1.3.1-2 -- Replace DSO patch with one accepted upstream -- Completely disable static linking - -* Wed Feb 24 2010 Mark Chappell - 1.3.1-1 -- Upstream version increment -- Remove unused patch -- Remove patch applied upstream -- Ensure consistent use of buildroot macro instead of RPM_BUILD_ROOT -- Fix implicit linking DSO failure -- Don't package empty .okay files which simply indicate test passes - -* Tue Dec 8 2009 Michael Schwendt - 1.2-7 -- Explicitly BR factory-static and libfac-static in accordance with the - Packaging Guidelines (factory-devel/libfac-devel are still static-only). - -* Tue Sep 22 2009 Rex Dieter - 1.2-6 -- fixup/optimize scriplets - -* Fri Jul 24 2009 Fedora Release Engineering - 1.2-5 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_12_Mass_Rebuild - -* Fri Apr 17 2009 Rex Dieter - 1.2-4 -- rebuild for ntl-devel (shared) - -* Wed Feb 25 2009 Rex Dieter - 1.2-3 -- BR: libfac-devel,factory-devel >= 3.1 -- restore ExcludeArch: ppc64 (#253847) - -* Mon Feb 23 2009 Fedora Release Engineering - 1.2-2 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_11_Mass_Rebuild - -* Fri Feb 13 2009 Rex Dieter 1.2-1 -- Macaulay-1.2 - -* Thu Oct 02 2008 Rex Dieter 1.1-2 -- respin (factory/libfac) - -* Tue Mar 11 2008 Rex Dieter 1.1-1 -- Macaulay2-1.1 -- Obsoletes/Provides: Macaulay2-common (upstream compatibility) -- re-enable ppc64 (#253847) -- IgnoreExampleErrors=true - -* Tue Feb 19 2008 Fedora Release Engineering - 0.9.95-10 -- Autorebuild for GCC 4.3 - -* Tue Dec 18 2007 Rex Dieter 0.9.95-9 -- Provides: macaulay2 -- respin against new(er) factory,libfac,ntl - -* Wed Aug 22 2007 Rex Dieter 0.9.95-8 -- ExcludeArch: ppc64 (#253847) - -* Tue Aug 21 2007 Rex Dieter 0.9.95-7 -- BR: gawk - -* Tue Aug 21 2007 Rex Dieter 0.9.95-6 -- gc-7.0 patches - -* Sat Aug 11 2007 Rex Dieter 0.9.95-5 -- License: GPLv2 - -* Mon Jan 15 2007 Rex Dieter 0.9.95-4 -- Ob/Pr: Macaulay2-doc, not -docs (#222609) - -* Sat Jan 06 2007 Rex Dieter 0.9.95-3 -- re-enable ppc build (#201739) - -* Tue Jan 02 2007 Rex Dieter 0.9.95-2 -- ./configure --disable-strip, for usable -debuginfo (#220893) - -* Mon Dec 18 2006 Rex Dieter 0.9.95-1 -- Macaulay2-0.9.95 - -* Wed Nov 22 2006 Rex Dieter 0.9.20-0.5.20060808svn -- .desktop Categories: -Application,Scientific,X-Fedora +ConsoleOnly - -* Tue Aug 29 2006 Rex Dieter 0.9.20-0.4.20060808svn -- fc6 respin - -* Tue Aug 08 2006 Rex Dieter 0.9.20-0.3.20060808svn -- ExcludeArch: ppc (bug #201739) -- %ghost (x)emacs site-lisp bits (using hints from fedora-rpmdevtools) - -* Tue Aug 08 2006 Rex Dieter 0.9.20-0.2.20060808svn -- 20060808 snapshot - -* Mon Jul 24 2006 Rex Dieter 0.9.20-0.1.20060724svn -- 2006-07-15-0.9.20 - -* Wed Jul 12 2006 Rex Dieter 0.9.10-0.6.20060710svn -- 0.9.10 - --* Mon Jul 10 2006 Rex Dieter 0.9.8-0.6.cvs20060327 -- BR: ncurses-devel - -* Fri May 05 2006 Rex Dieter 0.9.8-0.4.cvs20060327 -- 64bit patch (#188709) - -* Wed Apr 12 2006 Rex Dieter 0.9.8-0.3.cvs20060327 -- omit x86_64, for now (#188709) - -* Tue Apr 11 2006 Rex Dieter 0.9.8-0.2.cvs20060327 -- 0.9.8 (cvs, no tarball yet) -- drop -doc subpkg (in main now) - -* Mon Apr 10 2006 Rex Dieter 0.9.2-22 -- fix icon location (#188384) - -* Thu Mar 30 2006 Rex Dieter 0.9.2-21 -- really disable %%check (fails on fc5+ anyway) - -* Fri Jan 20 2006 Rex Dieter 0.9.2-20 -- .desktop: drop Category=Development -- app icon: follow icon spec -- drop -emacs subpkg (in main now) - -* Fri Sep 16 2005 Rex Dieter - 0.9.2-19 -- disable 'make check' (fc5/buildsystem error), besides, we get a - good consistency check when M2 builds all the doc examples. - -* Wed Sep 14 2005 Rex Dieter - 0.9.2-18 -- rebuild against gc-6.6 - -* Thu May 26 2005 Michael Schwendt - 0.9.2-17 -- rebuild (build system x86_64 repository access failed for 0.9.2-16) -- fix build for GCC 4 (#156223) - -* Thu Apr 7 2005 Michael Schwendt - 0.9.2-15 -- rebuilt - -* Mon Feb 21 2005 Rex Dieter 0:0.9.2-14 -- x86_64 issues (%%_libdir -> %%_prefix/lib ) -- remove desktop_file macro usage - -* Sat Oct 23 2004 Rex Dieter 0:0.9.2-0.fdr.13 -- BR: time (again) -- omit m2_dir/setup (not needed/wanted) - -* Mon Oct 18 2004 Rex Dieter 0:0.9.2-0.fdr.12 -- actually *apply* gcc34 patch this time. - -* Mon Oct 18 2004 Rex Dieter 0:0.9.2-0.fdr.11 -- gcc34 patch - -* Fri Oct 1 2004 Rex Dieter 0:0.9.2-0.fdr.10 -- explicit BR versions for gc-devel, libfac-devel, factory-devel - -* Tue Aug 10 2004 Rex Dieter 0:0.9.2-0.fdr.9 -- BR: time - -* Thu Jun 03 2004 Rex Dieter 0:0.9.2-0.fdr.8 -- .desktop: remove Terminaloptions to be desktop agnostic -- .desktop: Categories += Education;Math;Development (Devel only - added so it shows *somewhere* in gnome menus) - -* Tue Jun 01 2004 Rex Dieter 0:0.9.2-0.fdr.7 -- disable default 'make check' (util/screen fails on fc2) - -* Tue Mar 30 2004 Rex Dieter 0:0.9.2-0.fdr.6 -- desktop-file is now on by default -- use separate (not inline) .desktop file - -* Mon Jan 05 2004 Rex Dieter 0:0.9.2-0.fdr.5 -- fix BuildRequires: desktop-file-utils to satisfy rpmlint. -- put emacs files in emacs subdir too (to follow supplied docs) -- *really* nuke .cvsignore files -- fix desktop-file-install --add-cateagories usage - -* Tue Dec 23 2003 Rex Dieter 0:0.9.2-0.fdr.4 -- -emacs: use %%defattr -- -emacs: fix M2-init.el - -* Mon Nov 17 2003 Rex Dieter 0:0.9.2-0.fdr.3 -- update/simplify macros -- desktop_file support. -- emacs subpkg. -- relax Req's on subpkgs to just: Requires: %%name = %%epoch:%%version -- use non-versioned BuildRequires -- remove redundant BuildRequires: gmp-devel -- remove gc patch, no longer needed. -- delete/not-package a bunch of unuseful files. -- use --disable-strip when debug_package is in use. - -* Thu Nov 13 2003 Rex Dieter 0:0.9.2-0.fdr.2 -- no longer explictly Requires: emacs - -* Wed Nov 05 2003 Rex Dieter 0:0.9.2-0.fdr.1 -- missing Epoch: 0 - -* Fri Sep 12 2003 Rex Dieter 0.9.2-0.fdr.0 -- fedora'ize - +%autochangelog diff --git a/README.md b/README.md new file mode 100644 index 0000000..7d3e139 --- /dev/null +++ b/README.md @@ -0,0 +1,7 @@ +# Macaulay2 + +[Macaulay2](http://macaulay2.com/) is a system for computing in commutative +algebra, algebraic geometry and related fields. The system was originally +written by Dan Grayson and Mike Stillman. David Eisenbud joined the project a +number of years ago, and many users are writing packages for the system, and +some are contributing source code. diff --git a/changelog b/changelog new file mode 100644 index 0000000..f52a894 --- /dev/null +++ b/changelog @@ -0,0 +1,682 @@ +* Mon Oct 13 2025 Jerry James - 1.25.06-4 +- Drop unused atomic_ops dependency + +* Wed Oct 08 2025 Terje Rosten - 1.25.06-4 +- Move to C++17 for gtest 1.17.0 + +* Sat Aug 23 2025 Benjamin A. Beasley - 1.25.06-3 +- Rebuilt for tinyxml2 11.0.0 + +* Wed Aug 20 2025 Jerry James - 1.25.06-2 +- Rebuild for tbb 2022.2.0 + +* Fri Aug 08 2025 Jerry James - 1.25.06-1 +- Version 1.25.06 + +* Wed Jul 23 2025 Fedora Release Engineering - 1.25.05-5 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_43_Mass_Rebuild + +* Fri Jun 13 2025 Jerry James - 1.25.05-4 +- Unbundle factory-gftables (bz 2372455) + +* Wed Jun 11 2025 Jerry James - 1.25.05-3 +- Rebuild for normaliz 3.10.5 + +* Tue Jun 03 2025 Python Maint - 1.25.05-2 +- Rebuilt for Python 3.14 + +* Thu May 29 2025 Jerry James - 1.25.05-1 +- Version 1.25.05 +- Drop upstreamed patches: no_gftables, fplll, codim-option, rightarrow +- Add patch to avoid the deprecated strstream C++ header +- Unbundle memtailor, mathic, and mathicgb + +* Thu Feb 20 2025 Jerry James - 1.24.11-1 +- Version 1.24.11 +- Drop upstreamed vector overrun patch +- Add patch to fix mismatched options to codim +- BR e-antic-devel +- BR and Recommend msolve +- Move configuration steps to %%conf +- Remove pessimization on s390x + +* Thu Jan 16 2025 Fedora Release Engineering - 1.24.05-6 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_42_Mass_Rebuild + +* Fri Nov 22 2024 Benjamin A. Beasley - 1.24.05-5 +- Rebuild for libfplll 5.5.0 + +* Mon Sep 23 2024 Jerry James - 1.24.05-4 +- Rebuild for nauty 2.8.9 + +* Sat Aug 24 2024 Jerry James - 1.24.05-3 +- Rebuild for Singular 4.4.0p4 + +* Wed Jul 17 2024 Fedora Release Engineering - 1.24.05-2 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_41_Mass_Rebuild + +* Wed Jun 19 2024 Jerry James - 1.24.05-1 +- Version 1.24.05 + +* Fri Feb 23 2024 Jerry James - 1.22-6 +- Build the polymake and scip examples +- Recommend scip +- Disable ppc64le build until segfaults can be diagnosed + +* Mon Jan 22 2024 Fedora Release Engineering - 1.22-5 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild + +* Fri Jan 19 2024 Fedora Release Engineering - 1.22-4 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild + +* Wed Jan 17 2024 Jonathan Wakely - 1.22-3 +- Rebuilt for Boost 1.83 + +* Fri Nov 10 2023 Benjamin A. Beasley - 1.22-2 +- Correct appstreamcli invocation (--nonet no longer works) +- Ask appstreamcli to explain validation findings +- Also validate AppStream XML with appstream-util, required by guidelines + +* Thu Oct 26 2023 Jerry James - 1.22-1 +- Version 1.22 +- Drop upstreamed Macaulay2-configure-c99.patch +- Build against mariadb-connector-c instead of the server package + +* Wed Jul 19 2023 Fedora Release Engineering - 1.21-6 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild + +* Sat Apr 15 2023 Florian Weimer - 1.21-5 +- Port configure script to C99 + +* Mon Feb 20 2023 Jonathan Wakely - 1.21-4 +- Rebuilt for Boost 1.81 + +* Wed Jan 18 2023 Fedora Release Engineering - 1.21-3 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild + +* Thu Jan 12 2023 Jerry James - 1.21-2 +- Rebuild for libfplll 5.4.4 + +* Thu Dec 22 2022 Jerry James - 1.21-1 +- Version 1.21 +- Drop upstreamed patch for crash when building documentation +- Use rdns names for the desktop and metainfo files + +* Tue Dec 20 2022 Jerry James - 1.20-2 +- Convert License tag to SPDX + +* Sun Sep 25 2022 Rich Mattes - 1.20-2 +- Rebuild for tinyxml2-9.0.0 + +* Thu Aug 4 2022 Jerry James - 1.20-1 +- Version 1.20 + +* Wed Jul 20 2022 Fedora Release Engineering - 1.19.1-3 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild + +* Wed May 04 2022 Thomas Rodgers - 1.19.1-2 +- Rebuilt for Boost 1.78 + +* Mon Feb 21 2022 Jerry James - 1.19.1-1 +- Version 1.19.1 +- Disable LTO to work around segfaults + +* Wed Jan 19 2022 Fedora Release Engineering - 1.19-2 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild + +* Wed Nov 24 2021 Jerry James - 1.19-1 +- Version 1.19 + +* Fri Aug 06 2021 Jonathan Wakely - 1.18-4 +- Rebuilt for Boost 1.76 + +* Wed Jul 21 2021 Fedora Release Engineering - 1.18-3 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild + +* Tue Jun 29 2021 Jerry James - 1.18-2 +- Rebuild for ntl 11.5.1 + +* Thu Jun 17 2021 Jerry James - 1.18-1 +- Version 1.18 + +* Thu Feb 18 2021 Jerry James - 1.17-2 +- Reduce optimization level on s390x to work around FTBFS +- Install metainfo +- Add -mathic patch to silence GCC warnings +- Add -lto patch to silence LTO warnings + +* Mon Jan 25 2021 Fedora Release Engineering - 1.17-2 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild + +* Sat Jan 16 2021 Jerry James - 1.17-1 +- Version 1.17 +- Drop upstreamed patches: -nauty-paths, -format +- Merge -gcc11 patch into mathicgb-1.0.patch + +* Thu Oct 15 2020 Jeff Law - 1.16-2 +- Add missing #includes for gcc-11 + +* Mon Aug 31 2020 Jerry James - 1.16-1 +- Version 1.16 +- Drop upstreamed patch: -xdg_open +- Add -ulimit patch for the slower builders +- Add -format and -rightarrow patches +- Bundle packages due to garbage collector crashes: linbox, memtailor, mathic +- Drop the XEmacs subpackage; XEmacs support no longer works + +* Sun Aug 16 2020 Iñaki Úcar - 1.15.1.0-5 +- https://fedoraproject.org/wiki/Changes/FlexiBLAS_as_BLAS/LAPACK_manager + +* Sat Aug 01 2020 Fedora Release Engineering - 1.15.1.0-4 +- Second attempt - Rebuilt for + https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild + +* Mon Jul 27 2020 Fedora Release Engineering - 1.15.1.0-3 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild + +* Wed Jul 1 2020 Jeff Law - 1.15.1.0-2 +- Disable LTO + +* Wed Jun 3 2020 Jerry James - 1.15.1.0-1 +- Version 1.15.1.0 +- Drop upstreamed patches: -no_Werror, -mpir, -pthreads, -fflas-ffpack, + -fno-common, -gtest, -pthreads + +* Tue Feb 11 2020 Jerry James - 1.14.0.1-4 +- Add -fno-common patch to fix FTBFS with GCC 10 + +* Tue Jan 28 2020 Fedora Release Engineering - 1.14.0.1-4 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild + +* Fri Jan 10 2020 Jerry James - 1.14.0.1-3 +- Rebuild for ntl 11.4.3 + +* Fri Nov 1 2019 Jerry James - 1.14.0.1-2 +- Rebuild for givaro 4.1.1, fflas-ffpack 2.4.3, and linbox 1.6.3 + +* Thu Sep 26 2019 Jerry James - 1.14.0.1-1 +- Macaulay2-1.14.0.1 +- Drop upstreamed -format and -exception patches +- Also bundle libmpc since it is linked with mpfr +- Drop fix for F26 symlink-file snafu +- Build with python 3 instead of python 2 + +* Wed Jul 24 2019 Fedora Release Engineering - 1.12.0.1-6 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild + +* Sun Feb 17 2019 Igor Gnatenko - 1.12.0.1-5 +- Rebuild for readline 8.0 + +* Thu Jan 31 2019 Fedora Release Engineering - 1.12.0.1-4 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild + +* Tue Nov 20 2018 Jerry James - 1.12.0.1-3 +- Rebuild for lrslib 070 + +* Wed Oct 10 2018 Jerry James - 1.12.0.1-2 +- Rebuild for ntl 11.3.0 +- Build with openblas instead of atlas (bz 1618938) + +* Fri Aug 10 2018 Jerry James - 1.12.0.1-1 +- Macaulay2-1.12.0.1 +- Replace tiny icon of unknown origin with various sizes of upstream's icon +- Remove deprecated entries from the desktop file +- Add upstream mpfr 3.1.6 patches + +* Thu Jul 12 2018 Fedora Release Engineering - 1.11-3 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild + +* Tue Jul 3 2018 Jerry James - 1.11-2 +- Rebuild for ntl 11.1.0 +- Remove scriptlets that call install-info +- Do not byte compile python files in the examples + +* Sat Jun 2 2018 Jerry James - 1.11-1 +- Macaulay2-1.11 +- Drop upstreamed patches: -verbose_build, -givaro, -pari, -endian +- New patches: -fflas-ffpack, -format, -exception, -fplll, -configure +- Update bundled software +- Refresh INFO_FILES list + +* Fri Feb 09 2018 Igor Gnatenko - 1.9.2-8 +- Escape macros in %%changelog + +* Wed Feb 07 2018 Fedora Release Engineering - 1.9.2-7 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild + +* Thu Jan 18 2018 Igor Gnatenko - 1.9.2-6 +- Remove obsolete scriptlets + +* Wed Oct 11 2017 Jerry James - 1.9.2-5 +- Link rather than copy the normaliz binary +- Fix accidental replacement of factory symlink with a directory + +* Sat Sep 30 2017 Jerry James - 1.9.2-4 +- Rebuild for ntl 10.5.0 + +* Wed Aug 02 2017 Fedora Release Engineering - 1.9.2-3 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild + +* Wed Jul 26 2017 Fedora Release Engineering - 1.9.2-2 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild + +* Wed Apr 5 2017 Jerry James - 1.9.2-1 +- Macaulay2-1.9.2 +- Drop upstreamed patches: -disable_broken_debug_functions, -gc, -rpath, + -rh_configure_hack +- Add patches: -givaro, -gtest, -pari +- Create fake library and submodule tarballs to fool the build system into + building in support for system libraries +- Bundle mpfr, flint, and factory to avoid garbage collector crashes +- Replace the (X)Emacs triggers with (x)emacs-filesystem dependencies +- New URLs + +* Fri Feb 10 2017 Fedora Release Engineering - 1.6-34 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild + +* Thu Jan 12 2017 Igor Gnatenko - 1.6-33 +- Rebuild for readline 7.x + +* Thu Oct 20 2016 Jerry James - 1.6-32 +- Rebuild for ntl 10.1.0 + +* Mon Sep 5 2016 Jerry James - 1.6-31 +- Rebuild for ntl 9.11.0 + +* Fri Aug 12 2016 Jerry James - 1.6-30 +- Rebuild for fflas-ffpack 2.2.2, givaro 4.0.2, and linbox 1.4.2 + +* Mon Jul 25 2016 Jerry James - 1.6-29 +- Rebuild for ntl 9.10.0 + +* Thu Jun 2 2016 Jerry James - 1.6-28 +- Rebuild for ntl 9.9.1 + +* Fri Apr 29 2016 Jerry James - 1.6-27 +- Rebuild for ntl 9.8.0 +- Nauty is now available +- Drop -gcc-template-bug patch; gcc bug has been fixed + +* Sat Mar 19 2016 Jerry James - 1.6-26 +- Rebuild for ntl 9.7.0 + +* Sat Feb 20 2016 Jerry James - 1.6-25 +- Rebuild for ntl 9.6.4 +- Add -gcc-template-bug patch to work around gcc bug (bz 1307282) + +* Wed Feb 03 2016 Fedora Release Engineering - 1.6-24 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild + +* Thu Jan 14 2016 Jonathan Wakely - 1.6-23 +- Rebuilt for Boost 1.60 + +* Fri Dec 4 2015 Jerry James - 1.6-22 +- Rebuild for ntl 9.6.2 +- Add python2 BR for the tests + +* Sat Oct 17 2015 Kalev Lember - 1.6-21 +- Rebuilt for libntl soname bump + +* Fri Oct 16 2015 Jerry James - 1.6-20 +- Rebuild for ntl 9.4.0 + +* Tue Sep 29 2015 Rex Dieter 1.6-19 +- refresh config.guess/config.sub hack, fix FTBFS on aarch64 + +* Sat Sep 19 2015 Jerry James - 1.6-18 +- Rebuild for flint 2.5.2 and ntl 9.3.0 + +* Thu Aug 27 2015 Jonathan Wakely - 1.6-17 +- Rebuilt for Boost 1.59 + +* Wed Jul 29 2015 Fedora Release Engineering - 1.6-16 +- Rebuilt for https://fedoraproject.org/wiki/Changes/F23Boost159 + +* Wed Jul 22 2015 David Tardon - 1.6-15 +- rebuild for Boost 1.58 + +* Tue Jun 16 2015 Fedora Release Engineering - 1.6-14 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild + +* Mon May 18 2015 Jerry James - 1.6-13 +- Rebuild for ntl 9.1.1 and cddlib-094h + +* Fri May 15 2015 Jerry James - 1.6-12 +- Bump and rebuild + +* Sat May 9 2015 Jerry James - 1.6-11 +- Rebuild for ntl 9.1.0 + +* Mon Feb 2 2015 Jerry James - 1.6-10 +- Rebuild for ntl 8.1.2 + +* Mon Jan 26 2015 Petr Machata - 1.6-9 +- Rebuild for boost 1.57.0 + +* Thu Jan 15 2015 Jerry James - 1.6-8 +- Rebuild for ntl 8.1.0 +- Fix the desktop file name + +* Wed Oct 29 2014 Jerry James - 1.6-7 +- Rebuild for ntl 6.2.1 +- Revert Apr 8 HTML creation timeout, now handled upstream +- Revert use of -common subpkg; various arches timeout differently + +* Wed Sep 24 2014 Rex Dieter 1.6-6 +- enable -common subpkg (to be more compatible with upstream packaging) + +* Fri Aug 15 2014 Fedora Release Engineering - 1.6-5 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild + +* Wed Jun 25 2014 Rex Dieter 1.6-4 +- restore --build/--host configure options lost in 1.6 update, should help arm + +* Fri Jun 06 2014 Fedora Release Engineering - 1.6-3 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_Mass_Rebuild + +* Fri May 23 2014 Petr Machata - 1.6-2 +- Rebuild for boost 1.55.0 + +* Mon May 19 2014 Rex Dieter 1.6-1 +- Macaulay2-1.6 (#1074594) +- ExcludeArch: %%arm (#1099598) + +* Wed May 14 2014 Rex Dieter 1.5-8 +- rebuild (gc) + +* Tue Apr 8 2014 Jerry James - 1.5-7 +- Build for all arches +- Increase HTML creation timeouts for slower processors, such as ARM +- Add --build and --host invocations to configure to fix mismatched ARM names + +* Wed Apr 2 2014 Jerry James - 1.5-6 +- Rebuild for ntl 6.1.0 + +* Fri Mar 21 2014 Jerry James - 1.5-5 +- The normaliz patch was used; bring it back +- Complete the removal of the system_normaliz variable +- Link with RPM_LD_FLAGS +- Due to use of a static library, explicitly link with -lflint + +* Fri Jan 24 2014 Rex Dieter - 1.5-5 +- drop unused patches (4ti2, normalize) + +* Tue Jan 21 2014 Rex Dieter - 1.5-4 +- utilize %%_libexecdir/Macaulay2/... for helper/system binaries +- libdir: %%_libdir => %%_prefix/lib +- -common subpkg option (not used yet) + +* Tue Jan 14 2014 Jerry James - 1.5-3 +- Update normaliz interface for normaliz 2.8 and later + +* Tue Jul 30 2013 Petr Machata - 1.5-2 +- Rebuild for boost 1.54.0 + +* Thu May 23 2013 Rex Dieter 1.5-1 +- Release: 1 (using non-snapshot release tarball now) + +* Tue May 21 2013 Rex Dieter - 1.5-0.7.20130401 +- update to 20130401 r15955 snapshot release +- (Build)Requires: factory-gftables (see bug #965655) +- refresh INFO_FILES content + +* Mon May 6 2013 Jerry James - 1.5-0.6.20130214 +- Rebuild for m4ri 20130416 + +* Fri Feb 15 2013 Rex Dieter 1.5-0.5.20130214 +- r15838 (20130214 snapshot) + +* Wed Feb 13 2013 Rex Dieter 1.5-0.4.20120807 +- BR: doxygen-latex + +* Wed Feb 13 2013 Fedora Release Engineering - 1.5-0.3.20120807 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_19_Mass_Rebuild + +* Tue Aug 07 2012 Rex Dieter 1.5-0.2.20120807 +- 1.5 20120807 r15022 snapshot + +* Thu Jul 19 2012 Rex Dieter 1.4-9 +- rebuild against (Singular's) libfac/factory 3.1.3 + +* Wed Jul 18 2012 Fedora Release Engineering - 1.4-8 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_18_Mass_Rebuild + +* Tue Jul 03 2012 Rex Dieter 1.4-7 +- rebuild (pari) + +* Sun Jul 1 2012 pcpa - 1.4-6 +- Link to gmp not mpir. +- Rebuild with pari 2.5. + +* Wed May 30 2012 Rex Dieter +- 1.4-5 +- License: GPLv2 or GPLv3 (#821036) +- pkgconfig-style deps + +* Tue Feb 28 2012 Fedora Release Engineering - 1.4-4 +- Rebuilt for c++ ABI breakage + +* Thu Jan 12 2012 Fedora Release Engineering - 1.4-3 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_17_Mass_Rebuild + +* Fri Sep 30 2011 Rex Dieter 1.4-2 +- rebuild (gdbm) + +* Thu May 26 2011 Rex Dieter 1.4-1 +- 1.4 + +* Thu May 26 2011 Rex Dieter 1.3.1-9 +- Typo in INFO_FILES (#708086) + +* Mon Feb 07 2011 Fedora Release Engineering - 1.3.1-8 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_15_Mass_Rebuild + +* Wed Jun 30 2010 Rex Dieter - 1.3.1-7 +- BR: cddlib-static (#609698) + +* Tue Mar 16 2010 Rex Dieter - 1.3.1-6 +- rebuild (factory/libfac) + +* Tue Mar 16 2010 Mark Chappell - 1.3.1-5 +- Run install-info on all of the .info files we installed +- Re-enable the now functional ppc64 build + +* Wed Mar 10 2010 Mark Chappell - 1.3.1-4 +- Add in missing Requires runtime dependancies + +* Wed Mar 10 2010 Mark Chappell - 1.3.1-3 +- GPLv3/GPLv2 conflict, use compat-readline5 - bz#511299 + +* Tue Mar 09 2010 Mark Chappell - 1.3.1-2 +- Replace DSO patch with one accepted upstream +- Completely disable static linking + +* Wed Feb 24 2010 Mark Chappell - 1.3.1-1 +- Upstream version increment +- Remove unused patch +- Remove patch applied upstream +- Ensure consistent use of buildroot macro instead of RPM_BUILD_ROOT +- Fix implicit linking DSO failure +- Don't package empty .okay files which simply indicate test passes + +* Tue Dec 8 2009 Michael Schwendt - 1.2-7 +- Explicitly BR factory-static and libfac-static in accordance with the + Packaging Guidelines (factory-devel/libfac-devel are still static-only). + +* Tue Sep 22 2009 Rex Dieter - 1.2-6 +- fixup/optimize scriplets + +* Fri Jul 24 2009 Fedora Release Engineering - 1.2-5 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_12_Mass_Rebuild + +* Fri Apr 17 2009 Rex Dieter - 1.2-4 +- rebuild for ntl-devel (shared) + +* Wed Feb 25 2009 Rex Dieter - 1.2-3 +- BR: libfac-devel,factory-devel >= 3.1 +- restore ExcludeArch: ppc64 (#253847) + +* Mon Feb 23 2009 Fedora Release Engineering - 1.2-2 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_11_Mass_Rebuild + +* Fri Feb 13 2009 Rex Dieter 1.2-1 +- Macaulay-1.2 + +* Thu Oct 02 2008 Rex Dieter 1.1-2 +- respin (factory/libfac) + +* Tue Mar 11 2008 Rex Dieter 1.1-1 +- Macaulay2-1.1 +- Obsoletes/Provides: Macaulay2-common (upstream compatibility) +- re-enable ppc64 (#253847) +- IgnoreExampleErrors=true + +* Tue Feb 19 2008 Fedora Release Engineering - 0.9.95-10 +- Autorebuild for GCC 4.3 + +* Tue Dec 18 2007 Rex Dieter 0.9.95-9 +- Provides: macaulay2 +- respin against new(er) factory,libfac,ntl + +* Wed Aug 22 2007 Rex Dieter 0.9.95-8 +- ExcludeArch: ppc64 (#253847) + +* Tue Aug 21 2007 Rex Dieter 0.9.95-7 +- BR: gawk + +* Tue Aug 21 2007 Rex Dieter 0.9.95-6 +- gc-7.0 patches + +* Sat Aug 11 2007 Rex Dieter 0.9.95-5 +- License: GPLv2 + +* Mon Jan 15 2007 Rex Dieter 0.9.95-4 +- Ob/Pr: Macaulay2-doc, not -docs (#222609) + +* Sat Jan 06 2007 Rex Dieter 0.9.95-3 +- re-enable ppc build (#201739) + +* Tue Jan 02 2007 Rex Dieter 0.9.95-2 +- ./configure --disable-strip, for usable -debuginfo (#220893) + +* Mon Dec 18 2006 Rex Dieter 0.9.95-1 +- Macaulay2-0.9.95 + +* Wed Nov 22 2006 Rex Dieter 0.9.20-0.5.20060808svn +- .desktop Categories: -Application,Scientific,X-Fedora +ConsoleOnly + +* Tue Aug 29 2006 Rex Dieter 0.9.20-0.4.20060808svn +- fc6 respin + +* Tue Aug 08 2006 Rex Dieter 0.9.20-0.3.20060808svn +- ExcludeArch: ppc (bug #201739) +- %%ghost (x)emacs site-lisp bits (using hints from fedora-rpmdevtools) + +* Tue Aug 08 2006 Rex Dieter 0.9.20-0.2.20060808svn +- 20060808 snapshot + +* Mon Jul 24 2006 Rex Dieter 0.9.20-0.1.20060724svn +- 2006-07-15-0.9.20 + +* Wed Jul 12 2006 Rex Dieter 0.9.10-0.6.20060710svn +- 0.9.10 + +-* Mon Jul 10 2006 Rex Dieter 0.9.8-0.6.cvs20060327 +- BR: ncurses-devel + +* Fri May 05 2006 Rex Dieter 0.9.8-0.4.cvs20060327 +- 64bit patch (#188709) + +* Wed Apr 12 2006 Rex Dieter 0.9.8-0.3.cvs20060327 +- omit x86_64, for now (#188709) + +* Tue Apr 11 2006 Rex Dieter 0.9.8-0.2.cvs20060327 +- 0.9.8 (cvs, no tarball yet) +- drop -doc subpkg (in main now) + +* Mon Apr 10 2006 Rex Dieter 0.9.2-22 +- fix icon location (#188384) + +* Thu Mar 30 2006 Rex Dieter 0.9.2-21 +- really disable %%check (fails on fc5+ anyway) + +* Fri Jan 20 2006 Rex Dieter 0.9.2-20 +- .desktop: drop Category=Development +- app icon: follow icon spec +- drop -emacs subpkg (in main now) + +* Fri Sep 16 2005 Rex Dieter - 0.9.2-19 +- disable 'make check' (fc5/buildsystem error), besides, we get a + good consistency check when M2 builds all the doc examples. + +* Wed Sep 14 2005 Rex Dieter - 0.9.2-18 +- rebuild against gc-6.6 + +* Thu May 26 2005 Michael Schwendt - 0.9.2-17 +- rebuild (build system x86_64 repository access failed for 0.9.2-16) +- fix build for GCC 4 (#156223) + +* Thu Apr 7 2005 Michael Schwendt - 0.9.2-15 +- rebuilt + +* Mon Feb 21 2005 Rex Dieter 0:0.9.2-14 +- x86_64 issues (%%_libdir -> %%_prefix/lib ) +- remove desktop_file macro usage + +* Sat Oct 23 2004 Rex Dieter 0:0.9.2-0.fdr.13 +- BR: time (again) +- omit m2_dir/setup (not needed/wanted) + +* Mon Oct 18 2004 Rex Dieter 0:0.9.2-0.fdr.12 +- actually *apply* gcc34 patch this time. + +* Mon Oct 18 2004 Rex Dieter 0:0.9.2-0.fdr.11 +- gcc34 patch + +* Fri Oct 1 2004 Rex Dieter 0:0.9.2-0.fdr.10 +- explicit BR versions for gc-devel, libfac-devel, factory-devel + +* Tue Aug 10 2004 Rex Dieter 0:0.9.2-0.fdr.9 +- BR: time + +* Thu Jun 03 2004 Rex Dieter 0:0.9.2-0.fdr.8 +- .desktop: remove Terminaloptions to be desktop agnostic +- .desktop: Categories += Education;Math;Development (Devel only + added so it shows *somewhere* in gnome menus) + +* Tue Jun 01 2004 Rex Dieter 0:0.9.2-0.fdr.7 +- disable default 'make check' (util/screen fails on fc2) + +* Tue Mar 30 2004 Rex Dieter 0:0.9.2-0.fdr.6 +- desktop-file is now on by default +- use separate (not inline) .desktop file + +* Mon Jan 05 2004 Rex Dieter 0:0.9.2-0.fdr.5 +- fix BuildRequires: desktop-file-utils to satisfy rpmlint. +- put emacs files in emacs subdir too (to follow supplied docs) +- *really* nuke .cvsignore files +- fix desktop-file-install --add-cateagories usage + +* Tue Dec 23 2003 Rex Dieter 0:0.9.2-0.fdr.4 +- -emacs: use %%defattr +- -emacs: fix M2-init.el + +* Mon Nov 17 2003 Rex Dieter 0:0.9.2-0.fdr.3 +- update/simplify macros +- desktop_file support. +- emacs subpkg. +- relax Req's on subpkgs to just: Requires: %%name = %%epoch:%%version +- use non-versioned BuildRequires +- remove redundant BuildRequires: gmp-devel +- remove gc patch, no longer needed. +- delete/not-package a bunch of unuseful files. +- use --disable-strip when debug_package is in use. + +* Thu Nov 13 2003 Rex Dieter 0:0.9.2-0.fdr.2 +- no longer explictly Requires: emacs + +* Wed Nov 05 2003 Rex Dieter 0:0.9.2-0.fdr.1 +- missing Epoch: 0 + +* Fri Sep 12 2003 Rex Dieter 0.9.2-0.fdr.0 +- fedora'ize diff --git a/Macaulay2.desktop b/com.macaulay2.macaulay2.desktop similarity index 76% rename from Macaulay2.desktop rename to com.macaulay2.macaulay2.desktop index 7b71bda..3bbebc5 100644 --- a/Macaulay2.desktop +++ b/com.macaulay2.macaulay2.desktop @@ -2,8 +2,6 @@ Name=Macaulay2 Exec=M2 Icon=Macaulay2 -SwallowTitle=Macaulay2 Terminal=true Type=Application Categories=ConsoleOnly;Education;Math; -Encoding=UTF-8 diff --git a/com.macaulay2.macaulay2.metainfo.xml b/com.macaulay2.macaulay2.metainfo.xml new file mode 100644 index 0000000..0de35f5 --- /dev/null +++ b/com.macaulay2.macaulay2.metainfo.xml @@ -0,0 +1,35 @@ + + + com.macaulay2.macaulay2 + 0BSD + GPL-2.0-only OR GPL-3.0-only + Macaulay2 + System for algebraic geometry and commutative algebra + +

+ Macaulay 2 is a software system devoted to supporting research in + algebraic geometry and commutative algebra written by Daniel R. Grayson + and Michael E. Stillman. +

+ + com.macaulay2.macaulay2.desktop + + + https://faculty.math.illinois.edu/Macaulay2/Screenshots/texmacs.png + Macaulay2 with TeXmacs + + + https://faculty.math.illinois.edu/Macaulay2/Screenshots/emacs-M2-c.png + Macaulay2 with Emacs + + + Macaulay2-maintainers@fedoraproject.org + https://macaulay2.com/ + https://github.com/Macaulay2/M2/issues + https://groups.google.com/g/macaulay2 + + + M2 + M2-binary + + diff --git a/sources b/sources index 4b21996..96f74cc 100644 --- a/sources +++ b/sources @@ -1,3 +1,21 @@ -cbd99341ddfbed3f87dfd062e4673937 Macaulay2.png -306962059231692b22025430d7a2d9f4 Macaulay2-1.6-77124166d123caab69ac4655d15b6bfab3e74496-src.tar.bz2 -188991054fd785523aa1c2685397f4b4 gtest-1.6.0.tar.gz +SHA512 (Macaulay2-icons.tar.xz) = 069aa0ad70a0253583b00091c094da9b79d2a2f0f2d38aa97f543081f5df5fd3b5a9e1463febd6947c3151cf01844133174c7372f57e158c2d3faba6baed5d1d +SHA512 (Macaulay2-1.25.11.tar.gz) = 7ae9ced76fa17e37715165976348b0e93793a6fc9d6f6f46af4f54513e2e81be648d3f462d403af373dd7cc62a675a2f3c946b70668f9cabbe7b379e3b42adff +SHA512 (4ti2-1.6.13.tar.gz) = 3e6335e5e539594d121e8b38972e6d4e3aec51f8b6b617ae308200142c8f79407d5b64e7ef246aa47ee2b7cf4006647a860ea7e2fd498ca34d001470ec06b2f8 +SHA512 (cddlib-094m.tar.gz) = d140d57391b1c963d68ca2e344fbda723a5077004bace322a18362fdc1fff8b50fdc4b598ca8cdf131158e07afc96c5d9aafd7abde082a9e241701e403310b9f +SHA512 (cohomCalg-0.32.tar.gz) = b76d8de00b13a8fe8881222178247c5e99c15075c46290830f6c3afffb9dfc18af0d57f738ac5a0d7c00044db81b4465d1e0563c95f7f656a2440be5765c6818 +SHA512 (Csdp-6.2.0.tgz) = 6f6c44abcb7b0e277f5a42a1e31acbd41c8fbdce0c1641982a48199fe1d922b28d86433d1a98ac71ae521bea04188a830c441db1e9d8eebf174debf501430e82 +SHA512 (factory-4.4.1.tar.gz) = a6ebed7cc0dea06a40c596f8845194633b6175670119afc11cb93269940ff6866a270549b9796929c1cc216645d01386ddea455a07d9ea033ce937baa4a05dfe +SHA512 (flint-3.3.1.tar.gz) = c426655868fd104c7c9fb95ba1ed199f63168cfda6f2379ba7f249344fee32660a095f20ecf11666f47ee0c59e350213e16706ce13eb6c3cb41967f1eec81166 +SHA512 (fplll-5.5.0.tar.gz) = ffeeeb55c2e4dccb9c7fd2753e49fa3514ae0c88a119131fa6281b213566813c481f95befe0acde344c8c032d8341ef1ec074cd66b130de4f8b8f6eb20f40613 +SHA512 (frobby_v0.9.5.tar.gz) = 321da2c83ddd1e1364a2e97cdf69c9b7bc6d2a59583aeab93526030151222049bb7b7e32287e7575cab4d0d22593a92a1f926092b1ed8f9da6b4d68118371bdb +SHA512 (gfan0.6.2.tar.gz) = 08a9cc543967771af959a506b79db5b55e0e4942e4170dad8691db35ef7d381d878e1ea6534a3cacc0f5d30ec31564ec94cc20b46792d06f18a3a8a3c0aac91d +SHA512 (givaro-4.2.1.tar.gz) = 9ab55e19d6c205832ddb8f712691b79ea7ae796848fb2cb73ff8fcd2fd3ce06ec0d2b86c3e1ba4a0b9992156777524b26e754615d7b9809daeab9ff284be5885 +SHA512 (glpk-5.0.tar.gz) = 36bcba534ed69b0f5328f4626018359efe07f802322c0821db75c7d1935f760af8cb907189d7d7c5b2f134a8b6214ae747ca004acc4c5ceccf157f6fc311523d +SHA512 (linbox-1.7.1.tar.gz) = f13f607c4e7c4b6eb569d03007b96bc6ab4d57f520cfa557fda71c62eec43e23c24260c7495dbed9c39ddff18674c22eb72e43cff43fe7d0396f848f19df7595 +SHA512 (lrslib-073.tar.gz) = f5d283c3c9bcc8ea83c1f6a0ce184202ccd0818987caaa7cf32fe8287cf8277802587f5001dc44878658c962c48fe6ae1250e9a522bb2bf0fa1d0ca8b84e1b9a +SHA512 (M2-emacs-5249684.tar.gz) = 11c59430232e206b70042f0d365174a80f613ac528c18275cafaf28db32c06be7afe535ee61b10810caa7b5a21023abb0bd0ce30ee2e31fcf56565c20551d8df +SHA512 (mpfr-4.2.2.tar.gz) = 373c5ce2c9636e45685dfa94f45bc4f8f6c2c0512d634b9e065ec33cb29da727b3ea13cf23aff307c1da765a40064f0fd4a347a3849ebd97252984fc85a0a400 +SHA512 (mpsolve-3.2.3.tar.gz) = 27f3966f9ba6d96fd19551f574c4e917258f45f0f25c183b714a8a64a7fa9e4764c2466770dc78240ec431a745f3659c2acbff68ff1a9c89a81106eb25eb51fc +SHA512 (TOPCOM-1.1.2.tar.gz) = 8f0d6dcfe5d83b260f671d4fd231a8e5a902668d2bf02d0977fbfa6a1d49e0ba3f1f51f2305267a4cbc0591c183c07642ef3d9613aae8f27f1832fe96ca90abb +SHA512 (v0.9.2.tar.gz) = 2d205f1b74c445059f3b4ad6af45b10fc2eff2a0d41b373f71199965237dea200342702d0a0b5027f0d7e323d89d3317a89ef9ebe9f00a7f6341c37b436360bb +SHA512 (v3.12.1.tar.gz) = eedfbae0447a965da66fea6dcd1a561717faede85e0f2e19a794d3947f6b8b4649b3415786ceba65914755766fafc0c2ff4ba80dfd309230145f879e6b900284