diff --git a/.gitignore b/.gitignore index e69de29..9d7c64b 100644 --- a/.gitignore +++ b/.gitignore @@ -0,0 +1,7 @@ +/mmtf-python-1.0.6.tar.gz +/mmtf-python-1.0.7.tar.gz +/mmtf-python-1.0.10.tar.gz +/mmtf-python-1.0.12.tar.gz +/mmtf-python-1.1.0.tar.gz +/mmtf-python-1.1.2.tar.gz +/mmtf-python-1.1.3.tar.gz diff --git a/changelog b/changelog new file mode 100644 index 0000000..7ced8d7 --- /dev/null +++ b/changelog @@ -0,0 +1,104 @@ +* Fri Jan 26 2024 Fedora Release Engineering - 1.1.3-3 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild + +* Mon Jan 22 2024 Fedora Release Engineering - 1.1.3-2 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild + +* Wed Dec 27 2023 Dominik Mierzejewski 1.1.3-1 +- update to 1.1.3 +- use SPDX identifier in License field + +* Fri Jul 21 2023 Fedora Release Engineering - 1.1.2-21 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild + +* Tue Jun 13 2023 Python Maint - 1.1.2-20 +- Rebuilt for Python 3.12 + +* Fri Jan 20 2023 Fedora Release Engineering - 1.1.2-19 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild + +* Fri Jul 22 2022 Fedora Release Engineering - 1.1.2-18 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild + +* Mon Jun 13 2022 Python Maint - 1.1.2-17 +- Rebuilt for Python 3.11 + +* Fri Jan 21 2022 Fedora Release Engineering - 1.1.2-16 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild + +* Wed Dec 15 2021 Charalampos Stratakis - 1.1.2-15 +- Use pytest instead of the deprecated nose test runner + +* Fri Jul 23 2021 Fedora Release Engineering - 1.1.2-14 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild + +* Fri Jun 04 2021 Python Maint - 1.1.2-13 +- Rebuilt for Python 3.10 + +* Wed Jan 27 2021 Fedora Release Engineering - 1.1.2-12 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild + +* Wed Jul 29 2020 Fedora Release Engineering - 1.1.2-11 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild + +* Tue May 26 2020 Miro Hrončok - 1.1.2-10 +- Rebuilt for Python 3.9 + +* Thu Jan 30 2020 Fedora Release Engineering - 1.1.2-9 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild + +* Thu Oct 03 2019 Miro Hrončok - 1.1.2-8 +- Rebuilt for Python 3.8.0rc1 (#1748018) + +* Mon Aug 19 2019 Miro Hrončok - 1.1.2-7 +- Rebuilt for Python 3.8 + +* Fri Jul 26 2019 Fedora Release Engineering - 1.1.2-6 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild + +* Sat Feb 02 2019 Fedora Release Engineering - 1.1.2-5 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild + +* Wed Oct 17 2018 Zbigniew Jędrzejewski-Szmek - 1.1.2-4 +- Subpackage python2-mmtf has been removed + See https://fedoraproject.org/wiki/Changes/Mass_Python_2_Package_Removal + +* Sat Jul 14 2018 Fedora Release Engineering - 1.1.2-3 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild + +* Tue Jun 19 2018 Miro Hrončok - 1.1.2-2 +- Rebuilt for Python 3.7 + +* Wed May 23 2018 Dominik Mierzejewski 1.1.2-1 +- update to 1.1.2 (#1581003) + +* Fri Apr 06 2018 Dominik Mierzejewski 1.1.0-1 +- update to 1.1.0 (#1563660) + +* Wed Mar 07 2018 Dominik Mierzejewski 1.0.12-1 +- update to 1.0.12 (#1549879) + +* Wed Feb 21 2018 Dominik Mierzejewski 1.0.10-1 +- update to 1.0.10 (#1531012) +- use standard check wrapper + +* Fri Feb 09 2018 Fedora Release Engineering - 1.0.7-3 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild + +* Thu Jul 27 2017 Fedora Release Engineering - 1.0.7-2 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild + +* Thu Jun 29 2017 Dominik Mierzejewski 1.0.7-1 +- update to 1.0.7 (#1466315) + +* Mon Jun 05 2017 Dominik Mierzejewski 1.0.6-2 +- drop redundant macro definitions and use python version macros + +* Sat Jun 03 2017 Dominik Mierzejewski 1.0.6-1 +- update to 1.0.6 +- drop workarounds for issues fixed upstream + +* Thu May 18 2017 Dominik Mierzejewski 1.0.5-1 +- initial build +- include upstream test data missing from tarball +- don't run tests requiring network access diff --git a/python-mmtf.spec b/python-mmtf.spec new file mode 100644 index 0000000..82d7bf3 --- /dev/null +++ b/python-mmtf.spec @@ -0,0 +1,72 @@ +%bcond_without check +%global pname mmtf-python + +%global desc \ +The Macromolecular Transmission Format (MMTF) is a new compact binary format to\ +transmit and store biomolecular structures for fast 3D visualization and\ +analysis.\ +\ +Bradley AR, Rose AS, Pavelka A, Valasatava Y, Duarte JM, Prlić A, Rose PW (2017)\ +MMTF - an efficient file format for the transmission, visualization, and\ +analysis of macromolecular structures. bioRxiv 122689. doi: 10.1101/122689\ +\ +Valasatava Y, Bradley AR, Rose AS, Duarte JM, Prlić A, Rose PW (2017) Towards an\ +efficient compression of 3D coordinates of macromolecular structures. PLOS ONE\ +12(3): e0174846. doi: 10.1371/journal.pone.01748464\ +\ +Rose AS, Bradley AR, Valasatava Y, Duarte JM, Prlić A, Rose PW (2016) Web-based\ +molecular graphics for large complexes. In Proceedings of the 21st International\ +Conference on Web3D Technology (Web3D '16). ACM, New York, NY, USA, 185-186.\ +doi: 10.1145/2945292.2945324\ + + +Name: python-mmtf +Version: 1.1.3 +Release: %autorelease +Summary: A decoding library for the macromolecular transmission format (MMTF) +License: Apache-2.0 +URL: https://github.com/rcsb/mmtf-python +Source0: https://files.pythonhosted.org/packages/source/m/%{pname}/%{pname}-%{version}.tar.gz +BuildArch: noarch + +%description +%{desc} + +%package -n python3-mmtf +Summary: %{summary} +BuildRequires: python3-devel +%if %{with check} +BuildRequires: python3-msgpack +BuildRequires: python3-pytest +BuildRequires: python3-numpy +%endif +Requires: python3-msgpack + +%description -n python3-mmtf +%{desc} + +%prep +%setup -q -n %{pname}-%{version} + +%generate_buildrequires +%pyproject_buildrequires + +%build +%pyproject_wheel + +%install +%pyproject_install +%pyproject_save_files -l mmtf + +%if %{with check} +%check +%pyproject_check_import + +%pytest mmtf/tests/codec_tests.py +%endif + +%files -n python3-mmtf -f %{pyproject_files} +%doc CHANGELOG.md README.md + +%changelog +%autochangelog diff --git a/sources b/sources index e69de29..14839d7 100644 --- a/sources +++ b/sources @@ -0,0 +1 @@ +SHA512 (mmtf-python-1.1.3.tar.gz) = 44558ea3e38e8eb6431e597253473e49d4a4e3835f790f375f923d3c3702b3c096d5ecaac090a8fabc1cd285d6cfa8dbd3f7d6186d765b92d718ca6d34ad063b