91 lines
2.8 KiB
RPMSpec
91 lines
2.8 KiB
RPMSpec
%global forgeurl https://github.com/G-node/nixpy
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%global desc \
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The NIX project started as an initiative within the Electrophysiology Task \
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Force a part of the INCF Data sharing Program. The NIX data model allows to \
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store fully annotated scientific data-set, i.e. the data together with its \
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metadata within the same container. Our aim is to achieve standardization by \
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providing a common/generic data structure for a multitude of data types. See \
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the wiki for more information \
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\
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The current implementations store the actual data using the HDF5 file format as \
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a storage backend.
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Name: python-nixio
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Version: 1.5.4
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Release: %autorelease
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Summary: Python bindings for NIX
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%global tag %version
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%forgemeta
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License: BSD-3-Clause
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URL: %forgeurl
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# We need to upload a filtered version of the source archive because
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# docs/source/examples/lenna.png has several issues, including the lack of a
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# license. We have asked upstream to deal with this in
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# Please consider replacing lenna.png
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# https://github.com/G-Node/nixpy/issues/545
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# but for now, we must obtain the filtered archive by running the script in
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# Source2:
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# ./get_source ${VERSION}
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%dnl Source0: %forgesource
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Source0: nixpy-%{version}-filtered.tar.gz
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# The tagged snapshot on GitHub still says "dev" but the manually uploaded
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# release does not, so use the info.json from there
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# https://github.com/G-Node/nixpy/issues/528
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Source1: info.json
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# * Script used to obtain Source0: ./get_source %%{version}
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Source2: get_source
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# Remove deprecated pytest-runner dependency
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# https://github.com/G-Node/nixpy/pull/547
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# Rebased on 1.5.4, without changes to GitHub CI configuration
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# https://fedoraproject.org/wiki/Changes/DeprecatePythonPytestRunner
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Patch: 0001-Remove-deprecated-pytest-runner-dependency.patch
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BuildArch: noarch
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# No need for nix, they're uncoupling it from the C++
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# https://github.com/G-Node/nixpy/pull/276
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BuildRequires: python3-devel
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%description %{desc}
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%package -n python3-nixio
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Summary: %{summary}
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%description -n python3-nixio %{desc}
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%prep
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%autosetup -n nixpy-%{version} -p1
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# it sets examples_path based on the name of the cwd
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sed -i "s/nixpy/nixpy-%{version}/" nixio/test/test_doc_examples.py
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cp %{SOURCE1} nixio/info.json -v -p
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%generate_buildrequires
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%pyproject_buildrequires -x test
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%build
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%pyproject_wheel
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%install
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%pyproject_install
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%pyproject_save_files -l nixio
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%check
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# These require the removed lenna.png sample file:
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k="${k-}${k+ and }not (TestDocumentationExamples and test_image_data)"
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k="${k-}${k+ and }not (TestDocumentationExamples and test_image_with_metadata)"
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k="${k-}${k+ and }not (TestDocumentationExamples and test_multiple_rois)"
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k="${k-}${k+ and }not (TestDocumentationExamples and test_single_roi)"
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%pytest -k "${k-}"
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%files -n python3-nixio -f %{pyproject_files}
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%{_bindir}/nixio
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%changelog
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%autochangelog
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