Disable building on aarch64 (it is now broken again)
Add missing header (gcc 7) Fix a test failure on Fedora 26 i686 Fix some format warnings/errors in GlobusAuth Use the right delimiter when splitting the icon path in TASImage Disable two more tests on 32 bit arm
This commit is contained in:
parent
e910032e72
commit
f8ad33edc6
6 changed files with 199 additions and 8 deletions
15
root-Quantiles.patch
Normal file
15
root-Quantiles.patch
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@ -0,0 +1,15 @@
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diff --git a/math/mathcore/src/TMath.cxx b/math/mathcore/src/TMath.cxx
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index 942bb55..72618fc 100644
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--- a/math/mathcore/src/TMath.cxx
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+++ b/math/mathcore/src/TMath.cxx
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@@ -1210,7 +1210,9 @@ void TMath::Quantiles(Int_t n, Int_t nprob, Double_t *x, Double_t *quantiles, Do
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else
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nppm = n*prob[i]; // use m = 0
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- j = TMath::FloorNint(nppm);
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+ // be careful with machine precision
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+ double eps = 4 * TMath::Limits<Double_t>::Epsilon();
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+ j = TMath::FloorNint(nppm + eps);
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// LM : fix for numerical problems if nppm is actually equal to j, but results different for numerical error
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// g in the paper is nppm -j
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94
root-format.patch
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94
root-format.patch
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@ -0,0 +1,94 @@
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diff --git a/net/globusauth/src/GlobusAuth.cxx b/net/globusauth/src/GlobusAuth.cxx
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index 6e0a00a..0b778bf 100644
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--- a/net/globusauth/src/GlobusAuth.cxx
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+++ b/net/globusauth/src/GlobusAuth.cxx
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@@ -139,7 +139,7 @@ Int_t GlobusAuthenticate(TAuthenticate * tAuth, TString & user,
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return -1;
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}
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if (gDebug > 3)
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- Info("GlobusAuthenticate", " Credential Handle is 0x%x",
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+ Info("GlobusAuthenticate", " Credential Handle is %p",
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gGlbCredHandle);
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// Inquire credentials for subject name and convert it in human readable form ...
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@@ -193,7 +193,7 @@ Int_t GlobusAuthenticate(TAuthenticate * tAuth, TString & user,
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if (gDebug > 0)
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Error("GlobusAuthenticate",
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"Length of Issuer name not send correctly: bytes sent: %d (tot len: %d)",
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- bsnd - 1, strlen(buf));
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+ bsnd - 1, (int) strlen(buf));
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return 0;
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}
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// Now we send it to the server daemon
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@@ -240,7 +240,7 @@ Int_t GlobusAuthenticate(TAuthenticate * tAuth, TString & user,
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"recv host subj: did not receive all the bytes"
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" (recv: %d, due >%d)", brcv, retval);
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Error("GlobusAuthenticate", "recv host subj: (%d) %s",
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- strlen(host_subj), host_subj);
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+ (int) strlen(host_subj), host_subj);
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}
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if (host_subj) delete[] host_subj;
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return 0;
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@@ -262,7 +262,7 @@ Int_t GlobusAuthenticate(TAuthenticate * tAuth, TString & user,
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0 ? (GSS_C_DELEG_FLAG | GSS_C_MUTUAL_FLAG) : GSS_C_MUTUAL_FLAG;
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if (gDebug > 3)
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Info("GlobusAuthenticate",
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- " gssReqFlags: %p, GlbCredentials: %p", gssReqFlags, gGlbCredHandle);
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+ " gssReqFlags: 0x%x, GlbCredentials: %p", gssReqFlags, gGlbCredHandle);
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// Now we are ready to start negotiating with the Server
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if ((majStat =
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@@ -417,7 +417,7 @@ int GlobusGetDelCred()
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return 1;
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} else if (gDebug > 3)
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Info("GlobusGetDelCred:",
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- "Globus Credentials successfully imported (0x%x)",
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+ "Globus Credentials successfully imported (%p)",
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gGlbDelCredHandle);
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if (credential) delete[] credential;
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@@ -494,7 +494,7 @@ Int_t GlobusGetLocalEnv(Int_t *localEnv, TString protocol)
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Info("GlobusGetLocalEnv",
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"PROOF environment, called by the MASTER/SLAVE");
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Info("GlobusGetLocalEnv",
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- "string with pointer to del cred is 0x%x",
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+ "string with pointer to del cred is %p",
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gGlbDelCredHandle);
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}
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*localEnv = 2;
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@@ -542,7 +542,7 @@ Int_t GlobusGetLocalEnv(Int_t *localEnv, TString protocol)
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Int_t GlobusNameFromCred(gss_cred_id_t cred, TString &subjName)
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{
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if (gDebug > 2)
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- Info("GlobusNamesFromCred", "Enter: Handle: 0x%p", cred);
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+ Info("GlobusNamesFromCred", "Enter: Handle: %p", cred);
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// Inquire credentials for Subject name and convert it in human readable form ...
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OM_uint32 majStat = 0;
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@@ -662,7 +662,7 @@ void GlobusCleanupShm()
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if ((rc == EINVAL) || (rc == EIDRM)) {
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if (gDebug > 3)
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Info("GlobusCleanupShm:",
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- "credentials shared memory segment %s"
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+ "credentials shared memory segment "
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"already marked as destroyed");
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} else {
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Warning("GlobusCleanupShm:",
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@@ -730,7 +730,7 @@ Int_t GlobusCheckSecContext(const char *subjName, gss_ctx_id_t ctx)
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theName[nameBuffer.length]= '\0';
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if (gDebug > 2)
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Info("GlobusCheckSecContext","with subject name: %s (%d)",
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- theName, nameBuffer.length);
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+ theName, (int) nameBuffer.length);
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if (!strcmp(theName, subjName)) {
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if (gDebug > 2)
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Info("GlobusCheckSecContext",
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@@ -1010,7 +1010,7 @@ Int_t GlobusIssuerName(TString &issuerName)
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fn = Form("%s/.globus/usercert.pem",gSystem->HomeDirectory());
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if (gSystem->AccessPathName(fn, kReadPermission)) {
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emsg += fn;
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- Error("GlobusIssuerName", emsg.Data());
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+ Error("GlobusIssuerName", "%s", emsg.Data());
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return 1;
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}
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}
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12
root-missing-header-gcc7.patch
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12
root-missing-header-gcc7.patch
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@ -0,0 +1,12 @@
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diff --git a/test/stressEntryList.cxx b/test/stressEntryList.cxx
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index e39a80b..ee6303b 100644
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--- a/test/stressEntryList.cxx
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+++ b/test/stressEntryList.cxx
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@@ -38,6 +38,7 @@
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#include <map>
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#include <list>
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#include <array>
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+#include <functional>
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#include <stdlib.h>
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#include "TApplication.h"
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#include "TEntryList.h"
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39
root-python-install-path.patch
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39
root-python-install-path.patch
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@ -0,0 +1,39 @@
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diff --git a/bindings/pyroot/CMakeLists.txt b/bindings/pyroot/CMakeLists.txt
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index c537bae..3a2118e 100644
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--- a/bindings/pyroot/CMakeLists.txt
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+++ b/bindings/pyroot/CMakeLists.txt
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@@ -36,8 +36,13 @@ endif()
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file(GLOB pyfiles RELATIVE ${CMAKE_CURRENT_SOURCE_DIR} *.py)
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foreach(pyfile ${pyfiles})
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install(FILES ${pyfile} DESTINATION ${runtimedir})
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- install(CODE "execute_process(COMMAND python -m py_compile \$ENV{DESTDIR}${runtimedir}/${pyfile})")
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- install(CODE "execute_process(COMMAND python -O -m py_compile \$ENV{DESTDIR}${runtimedir}/${pyfile})")
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+ if(IS_ABSOLUTE ${runtimedir})
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+ set(absruntimedir ${runtimedir})
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+ else()
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+ set(absruntimedir ${CMAKE_INSTALL_PREFIX}/${runtimedir})
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+ endif()
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+ install(CODE "execute_process(COMMAND ${PYTHON_EXECUTABLE} -m py_compile \$ENV{DESTDIR}${absruntimedir}/${pyfile})")
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+ install(CODE "execute_process(COMMAND ${PYTHON_EXECUTABLE} -O -m py_compile \$ENV{DESTDIR}${absruntimedir}/${pyfile})")
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file(COPY ${pyfile} DESTINATION ${localruntimedir})
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endforeach()
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diff --git a/main/CMakeLists.txt b/main/CMakeLists.txt
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index 0f430c9..a431a2b 100644
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--- a/main/CMakeLists.txt
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+++ b/main/CMakeLists.txt
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@@ -43,7 +43,12 @@ if(python)
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endforeach()
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install(FILES python/cmdLineUtils.py DESTINATION ${runtimedir})
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- install(CODE "execute_process(COMMAND ${PYTHON_EXECUTABLE} -m py_compile \$ENV{DESTDIR}${runtimedir}/cmdLineUtils.py)")
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- install(CODE "execute_process(COMMAND ${PYTHON_EXECUTABLE} -O -m py_compile \$ENV{DESTDIR}${runtimedir}/cmdLineUtils.py)")
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+ if(IS_ABSOLUTE ${runtimedir})
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+ set(absruntimedir ${runtimedir})
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+ else()
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+ set(absruntimedir ${CMAKE_INSTALL_PREFIX}/${runtimedir})
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+ endif()
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+ install(CODE "execute_process(COMMAND ${PYTHON_EXECUTABLE} -m py_compile \$ENV{DESTDIR}${absruntimedir}/cmdLineUtils.py)")
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+ install(CODE "execute_process(COMMAND ${PYTHON_EXECUTABLE} -O -m py_compile \$ENV{DESTDIR}${absruntimedir}/cmdLineUtils.py)")
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configure_file(python/cmdLineUtils.py ${localruntimedir}/cmdLineUtils.py @ONLY)
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endif()
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@ -1748,9 +1748,9 @@ diff -Nur root-6.08.02.orig/graf2d/asimage/src/TASImage.cxx root-6.08.02/graf2d/
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+ Ssiz_t from = 0;
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+ TString token;
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+#ifndef R__WIN32
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+ const char *delim = "/";
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+ const char *delim = ":";
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+#else
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+ const char *delim = "\\";
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+ const char *delim = ";";
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#endif
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-
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- gIconPaths[6] = 0;
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41
root.spec
41
root.spec
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@ -23,7 +23,7 @@
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Name: root
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Version: 6.08.04
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%global libversion %(cut -d. -f 1-2 <<< %{version})
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Release: 2%{?dist}
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Release: 3%{?dist}
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Summary: Numerical data analysis framework
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License: LGPLv2+
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@ -94,7 +94,22 @@ Patch17: %{name}-TPad-WaitPrimitive.patch
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# Don't wait for user interaction in batch mode
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# https://github.com/root-mirror/root/pull/322
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Patch18: %{name}-spectrum-batch.patch
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# Add missing header (gcc 7)
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# https://github.com/root-mirror/root/pull/353
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Patch19: %{name}-missing-header-gcc7.patch
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# Fix for test suite on Fedora 26 i686
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# https://github.com/root-mirror/root/pull/359
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Patch20: %{name}-Quantiles.patch
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# Fix format warnings/errors
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# https://github.com/root-mirror/root/pull/376
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Patch21: %{name}-format.patch
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# Allow both absolute and relative python install paths
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# https://github.com/root-mirror/root/pull/382
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Patch22: %{name}-python-install-path.patch
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# The build on aarch64 used to work, but is now broken again
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# https://pagure.io/releng/issue/6653
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ExcludeArch: aarch64
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# s390 is not supported by cling: "error: unknown target
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# triple 's390-ibm-linux', please use -triple or -arch"
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ExcludeArch: s390
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@ -1566,6 +1581,10 @@ ROOT as a Jupyter Notebook.
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%patch16 -p1
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%patch17 -p1
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%patch18 -p1
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%patch19 -p1
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%patch20 -p1
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%patch21 -p1
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%patch22 -p1
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# Remove bundled sources in order to be sure they are not used
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# * afterimage
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@ -1782,7 +1801,7 @@ py2l=`pkg-config --libs-only-l python2 | sed -e 's/-l//' -e 's/\s*$//'`
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py3i=`pkg-config --cflags-only-I python3 | sed -e 's/-I//' -e 's/\s*$//'`
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py3l=`pkg-config --libs-only-l python3 | sed -e 's/-l//' -e 's/\s*$//'`
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sed -e "s,${py2i},${py3i},g" -e "s,-l${py2l},-l${py3l},g" \
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-e "s,lib${py2l},lib${py3l},g" -e 's, python , python3 ,g' \
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-e "s,lib${py2l},lib${py3l},g" -e 's,%{__python},%{__python3},g' \
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-e 's,lib/libPyROOT,python/libPyROOT,g' \
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-e 's,lib/libJupyROOT,python/libJupyROOT,g' \
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-e 's!bindings/pyroot!bindings/python!g' -i `find bindings/python -type f`
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@ -2074,14 +2093,18 @@ popd
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# - tutorial-multicore-imt101_parTreeProcessing
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# requires input data: http://root.cern.ch/files/tp_process_imt.root (707 MB)
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#
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# - tutorial-r-*
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# occasionally causes random crashes
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#
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# - test-stressiterators-interpreted
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# - tutorial-hist-sparsehist
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# - tutorial-r-*
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# - test-stressHistFactory-interpreted
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# - tutorial-histfactory-example
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# currently fails on 32 bit arm - reported upstream:
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# https://sft.its.cern.ch/jira/browse/ROOT-8500
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excluded="test-stressIOPlugins-.*|tutorial-tree-run_h1analysis|tutorial-multicore-imt001_parBranchProcessing|tutorial-multicore-mp103_processSelector|tutorial-multicore-imt101_parTreeProcessing"
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excluded="test-stressIOPlugins-.*|tutorial-tree-run_h1analysis|tutorial-multicore-imt001_parBranchProcessing|tutorial-multicore-mp103_processSelector|tutorial-multicore-imt101_parTreeProcessing|tutorial-r-.*"
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%ifarch %{arm}
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excluded="${excluded}|test-stressiterators-interpreted|tutorial-hist-sparsehist|tutorial-r-.*"
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excluded="${excluded}|test-stressiterators-interpreted|tutorial-hist-sparsehist|test-stressHistFactory-interpreted|tutorial-histfactory-example"
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%endif
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make test ARGS="%{?_smp_mflags} --output-on-failure -E \"${excluded}\""
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popd
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@ -3103,6 +3126,14 @@ fi
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%{_datadir}/%{name}/notebook
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%changelog
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* Wed Mar 01 2017 Mattias Ellert <mattias.ellert@physics.uu.se> - 6.08.04-3
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- Disable building on aarch64 (it is now broken again)
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- Add missing header (gcc 7)
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- Fix a test failure on Fedora 26 i686
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- Fix some format warnings/errors in GlobusAuth
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- Use the right delimiter when splitting the icon path in TASImage
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- Disable two more tests on 32 bit arm
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* Sat Feb 11 2017 Fedora Release Engineering <releng@fedoraproject.org> - 6.08.04-2
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild
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