Compare commits
11 commits
| Author | SHA1 | Date | |
|---|---|---|---|
|
|
77bbc590f1 | ||
| 8b2ed55118 | |||
| 9b4f52ac01 | |||
|
|
1870e689e7 | ||
|
|
9668b05564 | ||
|
|
1a83dc7de4 | ||
| 28f80a711a | |||
| 87106fb6b5 | |||
| 2972e8fbc2 | |||
|
|
6603f13508 | ||
|
|
b787d6a713 |
8 changed files with 136 additions and 244 deletions
4
.gitignore
vendored
4
.gitignore
vendored
|
|
@ -11,3 +11,7 @@
|
|||
/seqan3-3.3.0-rc.1.tar.gz
|
||||
/seqan3-3.3.0-rc.2.tar.gz
|
||||
/seqan3-3.4.0-rc.1.tar.gz
|
||||
/seqan3-3.4.0-rc.2.tar.gz
|
||||
/seqan3-3.4.0-rc.3.tar.gz
|
||||
/seqan3-3.4.0.tar.gz
|
||||
/seqan3-3.4.2.tar.gz
|
||||
|
|
|
|||
80
seqan3-3.4.0-disable_CPM.patch
Normal file
80
seqan3-3.4.0-disable_CPM.patch
Normal file
|
|
@ -0,0 +1,80 @@
|
|||
--- a/cmake/seqan3-config.orig.cmake 2024-12-13 18:42:15.000000000 +0100
|
||||
+++ b/cmake/seqan3-config.cmake 2025-01-19 21:13:45.692446573 +0100
|
||||
@@ -113,11 +113,7 @@
|
||||
# ----------------------------------------------------------------------------
|
||||
|
||||
# This will be true for git clones and source packages, but not for installed packages.
|
||||
-if (EXISTS "${CMAKE_CURRENT_LIST_DIR}/CPM.cmake")
|
||||
- set (SEQAN3_HAS_CPM TRUE)
|
||||
-else ()
|
||||
- set (SEQAN3_HAS_CPM FALSE)
|
||||
-endif ()
|
||||
+set (SEQAN3_HAS_CPM FALSE)
|
||||
|
||||
if (SEQAN3_HAS_CPM)
|
||||
set (CPM_INDENT " CMake Package Manager CPM: ")
|
||||
--- a/test/seqan3-test.orig.cmake 2024-12-13 18:42:15.000000000 +0100
|
||||
+++ b/test/seqan3-test.cmake 2025-01-19 21:18:08.209434385 +0100
|
||||
@@ -27,10 +27,6 @@
|
||||
"${CMAKE_CURRENT_LIST_DIR}/../cmake/"
|
||||
CACHE STRING "Path to directory containing CPM.cmake.")
|
||||
|
||||
-set (CPM_INDENT "CMake Package Manager CPM: ")
|
||||
-include ("${SEQAN3_TEST_CPM_DIR}/CPM.cmake")
|
||||
-CPMUsePackageLock ("${SEQAN3_TEST_CPM_DIR}/package-lock.cmake")
|
||||
-
|
||||
include (CheckCXXCompilerFlag)
|
||||
include (CheckCXXSourceCompiles)
|
||||
include (CMakeDependentOption)
|
||||
@@ -51,7 +47,6 @@
|
||||
cmake_dependent_option (SEQAN3_WITH_SEQAN2_CI "Build tests with SeqAn2." ON "DEFINED ENV{CI}" OFF)
|
||||
|
||||
if (SEQAN3_WITH_SEQAN2 OR SEQAN3_WITH_SEQAN2_CI)
|
||||
- CPMGetPackage (seqan)
|
||||
find_path (SEQAN3_SEQAN2_INCLUDE_DIR
|
||||
NAMES seqan/version.h
|
||||
HINTS "${seqan_SOURCE_DIR}/include")
|
||||
--- a/test/cmake/seqan3_require_ccache.orig.cmake 2024-12-13 18:42:15.000000000 +0100
|
||||
+++ b/test/cmake/seqan3_require_ccache.cmake 2025-01-19 21:19:53.256828886 +0100
|
||||
@@ -4,4 +4,4 @@
|
||||
|
||||
# This file's only purpose is to be replaced with the content of the use_ccache CMakeLists.txt file
|
||||
# when creating the source package.
|
||||
-CPMGetPackage (use_ccache)
|
||||
+# CPMGetPackage (use_ccache)
|
||||
--- a/test/unit/CMakeLists.orig.txt 2024-12-13 18:42:15.000000000 +0100
|
||||
+++ b/test/unit/CMakeLists.txt 2025-01-19 21:27:10.229117104 +0100
|
||||
@@ -8,7 +8,7 @@
|
||||
include (../seqan3-test.cmake)
|
||||
include (GoogleTest OPTIONAL)
|
||||
|
||||
-CPMGetPackage (googletest)
|
||||
+find_package(GTest REQUIRED)
|
||||
|
||||
include (diagnostics/list_missing_unit_tests)
|
||||
include (diagnostics/list_unused_unit_tests)
|
||||
|
||||
--- a/test/header/CMakeLists.orig.txt 2024-12-13 18:42:15.000000000 +0100
|
||||
+++ b/test/header/CMakeLists.txt 2025-01-19 22:08:37.815744299 +0100
|
||||
@@ -7,8 +7,8 @@
|
||||
|
||||
include (../seqan3-test.cmake)
|
||||
|
||||
-CPMGetPackage (googletest)
|
||||
-CPMGetPackage (benchmark)
|
||||
+find_package(GTest REQUIRED)
|
||||
+find_package(benchmark REQUIRED)
|
||||
|
||||
# We compile each header twice in separate compilation units, where the second compilation omits the header guard (check
|
||||
# for cyclic includes). Each alone is sufficient to test that the header is functional, but both are needed to check for
|
||||
--- a/test/performance/CMakeLists.orig.txt 2024-12-13 18:42:15.000000000 +0100
|
||||
+++ b/test/performance/CMakeLists.txt 2025-01-19 22:10:44.305669084 +0100
|
||||
@@ -7,7 +7,7 @@
|
||||
|
||||
include (../seqan3-test.cmake)
|
||||
|
||||
-CPMGetPackage (benchmark)
|
||||
+find_package(benchmark REQUIRED)
|
||||
|
||||
set (SEQAN3_BENCHMARK_MIN_TIME
|
||||
"1s"
|
||||
20
seqan3-fix_GCC15.patch
Normal file
20
seqan3-fix_GCC15.patch
Normal file
|
|
@ -0,0 +1,20 @@
|
|||
--- a/test/unit/io/detail/misc_output_test.orig.cpp 2024-12-13 18:42:15.000000000 +0100
|
||||
+++ b/test/unit/io/detail/misc_output_test.cpp 2025-01-20 21:58:35.651617085 +0100
|
||||
@@ -6,6 +6,7 @@
|
||||
|
||||
#include <fstream>
|
||||
#include <vector>
|
||||
+#include <functional>
|
||||
|
||||
#include <seqan3/core/debug_stream.hpp>
|
||||
#include <seqan3/io/detail/misc_input.hpp>
|
||||
--- a/include/seqan3/io/detail/misc_input.orig.hpp 2024-12-13 18:42:15.000000000 +0100
|
||||
+++ b/include/seqan3/io/detail/misc_input.hpp 2025-01-20 22:01:28.812235658 +0100
|
||||
@@ -17,6 +17,7 @@
|
||||
#include <span>
|
||||
#include <string>
|
||||
#include <tuple>
|
||||
+#include <functional>
|
||||
|
||||
#include <seqan3/contrib/stream/bgzf.hpp>
|
||||
#include <seqan3/contrib/stream/bgzf_istream.hpp>
|
||||
|
|
@ -1,35 +0,0 @@
|
|||
--- a/test/cmake/seqan3_require_benchmark.orig.cmake 2021-03-12 15:32:16.217895000 +0100
|
||||
+++ b/test/cmake/seqan3_require_benchmark.cmake 2021-03-12 15:33:34.694342382 +0100
|
||||
@@ -11,31 +11,5 @@
|
||||
# CMake 3.24: https://cmake.org/cmake/help/latest/module/FetchContent.html#variable:FETCHCONTENT_TRY_FIND_PACKAGE_MODE
|
||||
macro (seqan3_require_benchmark)
|
||||
enable_testing ()
|
||||
-
|
||||
- set (SEQAN3_BENCHMARK_TAG "v1.8.2")
|
||||
-
|
||||
- find_package (benchmark QUIET)
|
||||
-
|
||||
- # Also ensure that Google Benchmark if fetched for the latest library cron, which sets the tag to "main".
|
||||
- if (NOT benchmark_FOUND OR "${SEQAN3_BENCHMARK_TAG}" STREQUAL "main")
|
||||
- message (STATUS "Fetching Google Benchmark ${SEQAN3_BENCHMARK_TAG}")
|
||||
-
|
||||
- include (FetchContent)
|
||||
- FetchContent_Declare (
|
||||
- gbenchmark_fetch_content
|
||||
- GIT_REPOSITORY "https://github.com/google/benchmark.git"
|
||||
- GIT_TAG "${SEQAN3_BENCHMARK_TAG}")
|
||||
- option (BENCHMARK_ENABLE_TESTING "" OFF)
|
||||
- option (BENCHMARK_ENABLE_WERROR "" OFF) # Does not apply to Debug builds.
|
||||
- option (BENCHMARK_ENABLE_INSTALL "" OFF)
|
||||
- FetchContent_MakeAvailable (gbenchmark_fetch_content)
|
||||
- else ()
|
||||
- message (STATUS " Test dependency: Google Benchmark ${benchmark_VERSION} found.")
|
||||
- endif ()
|
||||
-
|
||||
- # NOTE: google benchmark's CMakeLists.txt already defines Shlwapi
|
||||
- if (NOT TARGET gbenchmark_build)
|
||||
- add_custom_target (gbenchmark_build DEPENDS benchmark_main benchmark)
|
||||
- endif ()
|
||||
-
|
||||
+ find_package(benchmark REQUIRED)
|
||||
endmacro ()
|
||||
|
|
@ -1,38 +0,0 @@
|
|||
--- a/build_system/seqan3-config.orig.cmake 2023-01-19 15:14:00.000000000 +0100
|
||||
+++ b/build_system/seqan3-config.cmake 2023-01-25 21:08:55.816191959 +0100
|
||||
@@ -122,9 +122,7 @@
|
||||
# Note that seqan3-config.cmake can be standalone and thus SEQAN3_CLONE_DIR might be empty.
|
||||
# * `SEQAN3_CLONE_DIR` was already found in seqan3-config-version.cmake
|
||||
# * `SEQAN3_INCLUDE_DIR` was already found in seqan3-config-version.cmake
|
||||
-find_path (SEQAN3_SUBMODULES_DIR
|
||||
- NAMES submodules/sdsl-lite
|
||||
- HINTS "${SEQAN3_CLONE_DIR}" "${SEQAN3_INCLUDE_DIR}/seqan3")
|
||||
+find_path (HINTS "${SEQAN3_CLONE_DIR}" "${SEQAN3_INCLUDE_DIR}/seqan3" "${CMAKE_INSTALL_PREFIX}/include/sdsl")
|
||||
|
||||
if (SEQAN3_INCLUDE_DIR)
|
||||
seqan3_config_print ("SeqAn3 include dir found: ${SEQAN3_INCLUDE_DIR}")
|
||||
@@ -133,24 +131,6 @@
|
||||
endif ()
|
||||
|
||||
# ----------------------------------------------------------------------------
|
||||
-# Detect if we are a clone of repository and if yes auto-add submodules
|
||||
-# ----------------------------------------------------------------------------
|
||||
-
|
||||
-if (SEQAN3_CLONE_DIR)
|
||||
- seqan3_config_print ("Detected as running from a repository checkout…")
|
||||
-endif ()
|
||||
-
|
||||
-if (SEQAN3_SUBMODULES_DIR)
|
||||
- file (GLOB submodules ${SEQAN3_SUBMODULES_DIR}/submodules/*/include)
|
||||
- foreach (submodule ${submodules})
|
||||
- if (IS_DIRECTORY ${submodule})
|
||||
- seqan3_config_print (" …adding submodule include: ${submodule}")
|
||||
- set (SEQAN3_DEPENDENCY_INCLUDE_DIRS ${submodule} ${SEQAN3_DEPENDENCY_INCLUDE_DIRS})
|
||||
- endif ()
|
||||
- endforeach ()
|
||||
-endif ()
|
||||
-
|
||||
-# ----------------------------------------------------------------------------
|
||||
# Options for CheckCXXSourceCompiles
|
||||
# ----------------------------------------------------------------------------
|
||||
|
||||
|
|
@ -1,43 +0,0 @@
|
|||
--- a/test/unit/contrib/stream/CMakeLists.txt.orig 2024-01-22 06:32:37.000000000 -0700
|
||||
+++ b/test/unit/contrib/stream/CMakeLists.txt 2024-01-30 14:41:58.518449609 -0700
|
||||
@@ -5,8 +5,8 @@ endif ()
|
||||
|
||||
if (ZLIB_FOUND)
|
||||
seqan3_test (gz_istream_test.cpp)
|
||||
- seqan3_test (gz_ostream_test.cpp)
|
||||
+ # seqan3_test (gz_ostream_test.cpp)
|
||||
|
||||
seqan3_test (bgzf_istream_test.cpp)
|
||||
- seqan3_test (bgzf_ostream_test.cpp)
|
||||
+ # seqan3_test (bgzf_ostream_test.cpp)
|
||||
endif ()
|
||||
--- a/test/unit/io/sam_file/CMakeLists.txt.orig 2024-01-22 06:32:37.000000000 -0700
|
||||
+++ b/test/unit/io/sam_file/CMakeLists.txt 2024-01-30 14:42:26.991058886 -0700
|
||||
@@ -1,7 +1,7 @@
|
||||
seqan3_test (format_bam_test.cpp CYCLIC_DEPENDING_INCLUDES include-seqan3-io-sam_file-format_sam.hpp)
|
||||
seqan3_test (format_sam_test.cpp CYCLIC_DEPENDING_INCLUDES include-seqan3-io-sam_file-format_bam.hpp)
|
||||
seqan3_test (sam_file_input_test.cpp)
|
||||
-seqan3_test (sam_file_output_test.cpp)
|
||||
+#seqan3_test (sam_file_output_test.cpp)
|
||||
seqan3_test (sam_file_record_test.cpp)
|
||||
seqan3_test (sam_file_seek_test.cpp)
|
||||
target_compile_definitions (sam_file_seek_test PUBLIC CURRENT_SOURCE_DIR="${CMAKE_CURRENT_LIST_DIR}")
|
||||
--- a/test/unit/io/sequence_file/CMakeLists.txt.orig 2024-01-22 06:32:37.000000000 -0700
|
||||
+++ b/test/unit/io/sequence_file/CMakeLists.txt 2024-01-30 14:42:50.918730565 -0700
|
||||
@@ -1,7 +1,7 @@
|
||||
seqan3_test (sequence_file_input_test.cpp)
|
||||
seqan3_test (sequence_file_integration_test.cpp)
|
||||
seqan3_test (sequence_file_integration_no_performance_test.cpp)
|
||||
-seqan3_test (sequence_file_output_test.cpp)
|
||||
+#seqan3_test (sequence_file_output_test.cpp)
|
||||
seqan3_test (sequence_file_format_embl_test.cpp)
|
||||
seqan3_test (sequence_file_format_fasta_test.cpp)
|
||||
seqan3_test (sequence_file_format_fasta_no_performance_test.cpp)
|
||||
--- a/test/unit/io/structure_file/CMakeLists.txt.orig 2024-01-22 06:32:37.000000000 -0700
|
||||
+++ b/test/unit/io/structure_file/CMakeLists.txt 2024-01-30 14:43:10.901456340 -0700
|
||||
@@ -1,4 +1,4 @@
|
||||
seqan3_test (format_vienna_test.cpp)
|
||||
seqan3_test (structure_file_input_test.cpp)
|
||||
-seqan3_test (structure_file_output_test.cpp)
|
||||
+#seqan3_test (structure_file_output_test.cpp)
|
||||
seqan3_test (structure_file_record_test.cpp)
|
||||
158
seqan3.spec
158
seqan3.spec
|
|
@ -24,8 +24,8 @@ ExclusiveArch: %{power64} x86_64 aarch64
|
|||
|
||||
Name: seqan3
|
||||
Summary: The modern C++ library for sequence analysis
|
||||
Version: 3.4.0
|
||||
Release: 0.1.rc1%{date}%{shortcommit}%{?dist}
|
||||
Version: 3.4.2
|
||||
Release: %autorelease
|
||||
License: BSD-3-Clause
|
||||
URL: https://www.seqan.de/
|
||||
# Source code archive generated by:
|
||||
|
|
@ -36,10 +36,11 @@ URL: https://www.seqan.de/
|
|||
%if 0%{?middle_release}
|
||||
Source0: https://github.com/seqan/%{name}/archive/%{commit}/%{name}-%{commit}.tar.gz
|
||||
%else
|
||||
Source0: https://github.com/seqan/%{name}/archive/%{version}-rc.1/%{name}-%{version}-rc.1.tar.gz
|
||||
Source0: https://github.com/seqan/%{name}/archive/%{version}/%{name}-%{version}.tar.gz
|
||||
%endif
|
||||
|
||||
BuildRequires: gcc, gcc-c++, dos2unix
|
||||
BuildRequires: gcc
|
||||
BuildRequires: gcc-c++
|
||||
BuildRequires: ccache
|
||||
BuildRequires: cmake >= 3.4
|
||||
BuildRequires: cereal-devel >= 1.3.2
|
||||
|
|
@ -56,15 +57,10 @@ BuildRequires: gtest-devel >= 1.10.0
|
|||
BuildRequires: texlive-newunicodechar
|
||||
BuildRequires: doxygen >= 1.9.4
|
||||
%endif
|
||||
|
||||
# Patches for unbundling libraries and fix some errors
|
||||
Patch0: %{name}-unbundle_benchmark.patch
|
||||
Patch1: %{name}-unbundle_sdsl.patch
|
||||
|
||||
# Skip tests that rely on byte-identical zlib output
|
||||
# The output of zlib-ng differs from that of traditional zlib
|
||||
Patch2: %{name}-zlib-ng.patch
|
||||
|
||||
# Use Fedora's CMake only
|
||||
Patch1: %{name}-3.4.0-disable_CPM.patch
|
||||
# Include missing header files
|
||||
Patch2: %{name}-fix_GCC15.patch
|
||||
%description
|
||||
SeqAn3 is the new version of the popular SeqAn template
|
||||
library for the analysis of biological sequences.
|
||||
|
|
@ -87,10 +83,8 @@ Requires: sdsl-lite-devel%{?_isa} >= 3.0.1
|
|||
Requires: zlib-devel%{?_isa} >= 1.2
|
||||
Requires: bzip2-devel%{?_isa} >= 1.0
|
||||
Requires: range-v3-devel%{?_isa} >= 0.11.0
|
||||
|
||||
Provides: bundled(bzip2stream)
|
||||
Provides: bundled(zipstream)
|
||||
|
||||
%description devel
|
||||
C++ headers files of SeqAn3, including CMake configuration files.
|
||||
|
||||
|
|
@ -101,10 +95,8 @@ BuildArch: noarch
|
|||
SeqAn3 documentation.
|
||||
|
||||
%prep
|
||||
%autosetup -n %{name}-%{version}-rc.1 -N
|
||||
%autosetup -n %{name}-%{version} -N
|
||||
|
||||
dos2unix test/cmake/seqan3_require_benchmark.cmake
|
||||
%patch 0 -p1 -b .backup
|
||||
%patch 1 -p1 -b .backup
|
||||
%patch 2 -p1 -b .backup
|
||||
|
||||
|
|
@ -120,33 +112,45 @@ find . -type f -name "*.hpp" -exec chmod 0644 '{}' \;
|
|||
%if %{with check}
|
||||
%if %{with test_api}
|
||||
mkdir -p build
|
||||
export CXXFLAGS="%{build_cxxflags} -std=c++20"
|
||||
export CXXFLAGS="%{build_cxxflags} -std=c++23"
|
||||
%cmake -S test/unit -B build -DCMAKE_BUILD_TYPE=Release \
|
||||
-DCPM_USE_LOCAL_PACKAGES:BOOL=OFF -DCPM_LOCAL_PACKAGES_ONLY:BOOL=OFF \
|
||||
-DCPM_DONT_UPDATE_MODULE_PATH:BOOL=ON -DCPM_DONT_CREATE_PACKAGE_LOCK:BOOL=ON \
|
||||
-DCMAKE_VERBOSE_MAKEFILE:BOOL=ON \
|
||||
-DSEQAN3_CEREAL:BOOL=ON \
|
||||
-DSEQAN3_TEST_BUILD_OFFLINE:BOOL=ON
|
||||
-DSEQAN3_TEST_BUILD_OFFLINE:BOOL=ON -DFETCHCONTENT_FULLY_DISCONNECTED:BOOL=ON \
|
||||
-DFETCHCONTENT_UPDATES_DISCONNECTED:BOOL=ON \
|
||||
-DSEQAN3_NO_ZLIB=OFF
|
||||
|
||||
%define _vpath_builddir build
|
||||
%cmake_build
|
||||
%endif
|
||||
%if %{with test_header}
|
||||
mkdir -p build-header
|
||||
export CXXFLAGS="%{build_cxxflags} -std=c++20"
|
||||
export CXXFLAGS="%{build_cxxflags} -std=c++23"
|
||||
%cmake -S test/header -B build-header -DCMAKE_BUILD_TYPE=Release \
|
||||
-DCPM_USE_LOCAL_PACKAGES:BOOL=OFF -DCPM_LOCAL_PACKAGES_ONLY:BOOL=OFF \
|
||||
-DCPM_DONT_UPDATE_MODULE_PATH:BOOL=ON -DCPM_DONT_CREATE_PACKAGE_LOCK:BOOL=ON \
|
||||
-DCMAKE_VERBOSE_MAKEFILE:BOOL=ON \
|
||||
-DSEQAN3_CEREAL:BOOL=ON \
|
||||
-DSEQAN3_TEST_BUILD_OFFLINE:BOOL=ON
|
||||
-DSEQAN3_TEST_BUILD_OFFLINE:BOOL=ON -DFETCHCONTENT_FULLY_DISCONNECTED:BOOL=ON \
|
||||
-DFETCHCONTENT_UPDATES_DISCONNECTED:BOOL=ON \
|
||||
-DSEQAN3_NO_ZLIB=OFF
|
||||
|
||||
%define _vpath_builddir build-header
|
||||
%cmake_build
|
||||
%endif
|
||||
%if %{with benchmark}
|
||||
mkdir -p build-performance
|
||||
export CXXFLAGS="%{build_cxxflags} -std=c++20"
|
||||
export CXXFLAGS="%{build_cxxflags} -std=c++23"
|
||||
%cmake -S test/performance -B build-performance -DCMAKE_BUILD_TYPE=Release \
|
||||
-DCPM_USE_LOCAL_PACKAGES:BOOL=OFF -DCPM_LOCAL_PACKAGES_ONLY:BOOL=OFF \
|
||||
-DCPM_DONT_UPDATE_MODULE_PATH:BOOL=ON -DCPM_DONT_CREATE_PACKAGE_LOCK:BOOL=ON \
|
||||
-DCMAKE_VERBOSE_MAKEFILE:BOOL=ON \
|
||||
-DSEQAN3_CEREAL:BOOL=ON \
|
||||
-DSEQAN3_TEST_BUILD_OFFLINE:BOOL=ON
|
||||
-DSEQAN3_TEST_BUILD_OFFLINE:BOOL=ON -DFETCHCONTENT_FULLY_DISCONNECTED:BOOL=ON \
|
||||
-DFETCHCONTENT_UPDATES_DISCONNECTED:BOOL=ON \
|
||||
-DSEQAN3_NO_ZLIB=OFF
|
||||
|
||||
%define _vpath_builddir build-performance
|
||||
%cmake_build
|
||||
|
|
@ -164,7 +168,8 @@ mkdir -p %{buildroot}%{_libdir}/cmake/%{name}
|
|||
cp -a include %{buildroot}%{_prefix}/
|
||||
rm %{buildroot}%{_includedir}/%{name}/contrib/std/.{clang-format,gitignore}
|
||||
|
||||
install -pm 644 build_system/*.cmake %{buildroot}%{_libdir}/cmake/%{name}/
|
||||
install -pm 644 cmake/seqan3-config-version.cmake %{buildroot}%{_libdir}/cmake/%{name}/
|
||||
install -pm 644 cmake/seqan3-config.cmake %{buildroot}%{_libdir}/cmake/%{name}/
|
||||
|
||||
%if %{with doc}
|
||||
mkdir -p build-doc
|
||||
|
|
@ -207,105 +212,4 @@ mkdir -p build-doc
|
|||
%endif
|
||||
|
||||
%changelog
|
||||
* Tue Jan 30 2024 Jerry James <loganjerry@gmail.com> - 3.4.0-0.1.rc1
|
||||
- Pre-release 3.4.0 RC1
|
||||
- Remove unused dependency on coin-or-lemon
|
||||
- Convert License field to SPDX
|
||||
- Note that the devel package bundles zipstream and bzip2stream
|
||||
- Note that the devel package needs zlib-devel and bzip2-devel
|
||||
|
||||
* Sat Jan 27 2024 Fedora Release Engineering <releng@fedoraproject.org> - 3.3.0-0.7.rc2
|
||||
- Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild
|
||||
|
||||
* Thu Aug 10 2023 Antonio Trande <sagitter@fedoraproject.org> - 3.3.0-0.6.rc2
|
||||
- Pre-release 3.3.0 RC2
|
||||
|
||||
* Tue Jul 18 2023 Antonio Trande <sagitter@fedoraproject.org> - 3.3.0-0.5.rc1
|
||||
- Pre-release 3.3.0 RC1
|
||||
|
||||
* Thu Apr 06 2023 Antonio Trande <sagitter@fedoraproject.org> - 3.3.0-0.4.20230403git8c604d98
|
||||
- Pre-release 3.3.0 commit #8c604d98
|
||||
|
||||
* Thu Mar 30 2023 Antonio Trande <sagitter@fedoraproject.org> - 3.3.0-0.3.20230330git174255ee
|
||||
- Pre-release 3.3.0 commit #174255ee
|
||||
- Disable tests
|
||||
- Disable benchmarks
|
||||
|
||||
* Sat Mar 25 2023 Antonio Trande <sagitter@fedoraproject.org> - 3.3.0-0.2.20230119gitc5ec15bd
|
||||
- Pre-release 3.3.0 commit #c5ec15bd
|
||||
|
||||
* Tue Jan 24 2023 Antonio Trande <sagitter@fedoraproject.org> - 3.3.0-0.1.20230119git404affbf
|
||||
- Pre-release 3.3.0 commit #404affbf
|
||||
|
||||
* Sat Jan 21 2023 Fedora Release Engineering <releng@fedoraproject.org> - 3.2.0-3
|
||||
- Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild
|
||||
|
||||
* Sat Jul 23 2022 Fedora Release Engineering <releng@fedoraproject.org> - 3.2.0-2
|
||||
- Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild
|
||||
|
||||
* Sun Jun 26 2022 Antonio Trande <sagitter@fedoraproject.org> - 3.2.0-1
|
||||
- Release 3.2.0
|
||||
|
||||
* Wed Jun 15 2022 Antonio Trande <sagitter@fedoraproject.org> - 3.2.0-0.1.rc1.20220615git1148ce10
|
||||
- Pre-release 3.2.0
|
||||
- Enable tests
|
||||
|
||||
* Sat Feb 05 2022 Fedora Release Engineering <releng@fedoraproject.org> - 3.1.0-3
|
||||
- Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild
|
||||
- Patched for GCC-12
|
||||
|
||||
* Mon Jan 17 2022 Kevin Fenzi <kevin@scrye.com> - 3.1.0-2
|
||||
- Rebuild for hiredis 1.0.2
|
||||
|
||||
* Fri Nov 26 2021 Antonio Trande <sagitter@fedoraproject.org> - 3.1.0-1
|
||||
- Release 3.1.0
|
||||
|
||||
* Sun Sep 05 2021 Antonio Trande <sagitter@fedoraproject.org> - 3.1.0-0.2.20210809git4604f1b2
|
||||
- Rebuild for gtest-1.11.0
|
||||
|
||||
* Mon Aug 09 2021 Antonio Trande <sagitter@fedoraproject.org> - 3.1.0-0.1.20210809git4604f1b2
|
||||
- Pre-release 3.1.0
|
||||
|
||||
* Fri Jul 23 2021 Fedora Release Engineering <releng@fedoraproject.org> - 3.0.3-2
|
||||
- Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild
|
||||
|
||||
* Fri May 28 2021 Antonio Trande <sagitter@fedoraproject.org> - 3.0.3-1
|
||||
- Release 3.0.3
|
||||
|
||||
* Wed May 26 2021 Antonio Trande <sagitter@fedoraproject.org> - 3.0.3-0.1.rc1
|
||||
- Pre-release 3.0.3-rc1
|
||||
|
||||
* Sun Feb 14 2021 Antonio Trande <sagitter@fedoraproject.org> - 3.0.2-7
|
||||
- Disable tests with GCC-11 (rhbz#1923593)
|
||||
- Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild
|
||||
|
||||
* Fri Dec 11 2020 Antonio Trande <sagitter@fedoraproject.org> - 3.0.2-6
|
||||
- Rebuild for GCC-11
|
||||
|
||||
* Tue Nov 03 2020 Antonio Trande <sagitter@fedoraproject.org> - 3.0.2-5
|
||||
- Bundle sdsl header files
|
||||
|
||||
* Sat Oct 17 2020 Antonio Trande <sagitter@fedoraproject.org> - 3.0.2-4
|
||||
- Remove old License file from bundled libraries
|
||||
- Redefine vpath builddir
|
||||
|
||||
* Fri Oct 16 2020 Antonio Trande <sagitter@fedoraproject.org> - 3.0.2-3
|
||||
- Fix Requires packages
|
||||
|
||||
* Wed Oct 14 2020 Antonio Trande <sagitter@fedoraproject.org> - 3.0.2-2
|
||||
- Use -std=c++2a flag
|
||||
- Patched for upstream bugs #2209 #2210
|
||||
|
||||
* Tue Oct 13 2020 Antonio Trande <sagitter@fedoraproject.org> - 3.0.2-1
|
||||
- Release 3.0.2
|
||||
|
||||
* Fri Aug 07 2020 Antonio Trande <sagitter@fedoraproject.org> - 3.0.2-0.2.20200806gitbf04354
|
||||
- Pre-release 3.0.2 with bundled range-v3
|
||||
|
||||
* Thu Aug 06 2020 Antonio Trande <sagitter@fedoraproject.org> - 3.0.2-0.1.20200806gitbf04354
|
||||
- Pre-release 3.0.2
|
||||
|
||||
* Thu Mar 05 2020 Antonio Trande <sagitter@fedoraproject.org> - 3.0.1-1
|
||||
- Execute header/performance tests
|
||||
- Build docs
|
||||
- First package
|
||||
%autochangelog
|
||||
|
|
|
|||
2
sources
2
sources
|
|
@ -1 +1 @@
|
|||
SHA512 (seqan3-3.4.0-rc.1.tar.gz) = fdd098aca7bc0f18acc018ef8dd5d451576798ad7a7fdc7998fdba941cd018bb74d39e7808dfa152f71f079782d0914bfa4e056b9cabc7016e47a83da4b96af6
|
||||
SHA512 (seqan3-3.4.2.tar.gz) = 6337bb3d49406e89e277ab4b9e751f6b2a0524c32c7aecf2093b795863870c2337bb1df1c798791aee82325cb3f0b19ecb57e109d73db847e6fe6a2a033bbaae
|
||||
|
|
|
|||
Loading…
Add table
Add a link
Reference in a new issue