From 59542fc2bf240096270fe0ed2ff20d19550eac00 Mon Sep 17 00:00:00 2001
From: "Benjamin A. Beasley" <code@musicinmybrain.net>
Date: Sun, 22 Jan 2023 09:43:13 -0500
Subject: [PATCH 01/18] Update to 7.20.0 (close RHBZ#2162603)

---
 .gitignore     |  1 +
 snakemake.spec | 13 ++++++++-----
 sources        |  2 +-
 3 files changed, 10 insertions(+), 6 deletions(-)

diff --git a/.gitignore b/.gitignore
index 41d20bd..866dbb2 100644
--- a/.gitignore
+++ b/.gitignore
@@ -16,3 +16,4 @@
 /snakemake-7.18.1.tar.gz
 /snakemake-7.18.2.tar.gz
 /snakemake-7.19.1.tar.gz
+/snakemake-7.20.0.tar.gz
diff --git a/snakemake.spec b/snakemake.spec
index 1881de7..e7b7301 100644
--- a/snakemake.spec
+++ b/snakemake.spec
@@ -12,15 +12,18 @@ Finally, Snakemake workflows can entail a description of required software,
 which will be automatically deployed to any execution environment.}
 
 Name:           snakemake
-Version:        7.19.1
+Version:        7.20.0
 Release:        %autorelease 
 Summary:        Workflow management system to create reproducible and scalable data analyses
 
 # The entire project is (SPDX) MIT, except:
-# - versioneer.py is LicenseRef-Fedora-Public-Domain (“License: Public Domain”)
-#   but does not contribute to the license of the binary RPM
-# SPDX
-License:        MIT
+# - versioneer.py is Unlicense
+# - snakemake/_version.py says:
+#     This file is released into the public domain.
+#   which would be LicenseRef-Fedora-Public-Domain, except that the comments in
+#   versioneer.py make it clear that Unlicense is intended for the generated
+#   files as well.
+License:        MIT AND Unlicense
 URL:            https://snakemake.readthedocs.io/en/stable/index.html
 Source0:        https://github.com/snakemake/snakemake/archive/v%{version}/snakemake-%{version}.tar.gz
 
diff --git a/sources b/sources
index 928268b..dbce9d7 100644
--- a/sources
+++ b/sources
@@ -1 +1 @@
-SHA512 (snakemake-7.19.1.tar.gz) = d35d4f61eef4f25a7f4b5f1869e10e259fe9aad11704ee59cd4f9c0ba1a2f58cde197be57eee6ed478bedc865971b584c1a3802e2044bb9817be5d5c4d1800d1
+SHA512 (snakemake-7.20.0.tar.gz) = 527ad7d91ad502845c86e41e7ac19f2d206f76ce49c2dc50b4ecf0a95b13bd73fa44091f4e5f32af764c9e5fbe55490a22e124c046ac8c62bb990222eefc4e86

From fc6248a03af49aaad88f5104a8b52e7dbd52c249 Mon Sep 17 00:00:00 2001
From: "Benjamin A. Beasley" <code@musicinmybrain.net>
Date: Wed, 8 Feb 2023 16:18:27 -0500
Subject: [PATCH 02/18] Update to 7.21.0 (close RHBZ#2166983)

---
 .gitignore     | 1 +
 snakemake.spec | 2 +-
 sources        | 2 +-
 3 files changed, 3 insertions(+), 2 deletions(-)

diff --git a/.gitignore b/.gitignore
index 866dbb2..53fdb3a 100644
--- a/.gitignore
+++ b/.gitignore
@@ -17,3 +17,4 @@
 /snakemake-7.18.2.tar.gz
 /snakemake-7.19.1.tar.gz
 /snakemake-7.20.0.tar.gz
+/snakemake-7.21.0.tar.gz
diff --git a/snakemake.spec b/snakemake.spec
index e7b7301..d7e6ba9 100644
--- a/snakemake.spec
+++ b/snakemake.spec
@@ -12,7 +12,7 @@ Finally, Snakemake workflows can entail a description of required software,
 which will be automatically deployed to any execution environment.}
 
 Name:           snakemake
-Version:        7.20.0
+Version:        7.21.0
 Release:        %autorelease 
 Summary:        Workflow management system to create reproducible and scalable data analyses
 
diff --git a/sources b/sources
index dbce9d7..3db7b60 100644
--- a/sources
+++ b/sources
@@ -1 +1 @@
-SHA512 (snakemake-7.20.0.tar.gz) = 527ad7d91ad502845c86e41e7ac19f2d206f76ce49c2dc50b4ecf0a95b13bd73fa44091f4e5f32af764c9e5fbe55490a22e124c046ac8c62bb990222eefc4e86
+SHA512 (snakemake-7.21.0.tar.gz) = a183d5810a4882ff9e31f6cbc157667f6980cbd2bd52d89521bd09161a11511343a69dbbdb2bcc390b14e9d87bc219a58fff8309c56e0fe193bf14f26531b611

From a54d2f9237b7b057928f52736310c7d10e240b95 Mon Sep 17 00:00:00 2001
From: "Benjamin A. Beasley" <code@musicinmybrain.net>
Date: Mon, 13 Feb 2023 11:13:06 -0500
Subject: [PATCH 03/18] Update to 7.22.0 (close RHBZ#2169240)

---
 .gitignore     | 1 +
 snakemake.spec | 2 +-
 sources        | 2 +-
 3 files changed, 3 insertions(+), 2 deletions(-)

diff --git a/.gitignore b/.gitignore
index 53fdb3a..041c205 100644
--- a/.gitignore
+++ b/.gitignore
@@ -18,3 +18,4 @@
 /snakemake-7.19.1.tar.gz
 /snakemake-7.20.0.tar.gz
 /snakemake-7.21.0.tar.gz
+/snakemake-7.22.0.tar.gz
diff --git a/snakemake.spec b/snakemake.spec
index d7e6ba9..4a10894 100644
--- a/snakemake.spec
+++ b/snakemake.spec
@@ -12,7 +12,7 @@ Finally, Snakemake workflows can entail a description of required software,
 which will be automatically deployed to any execution environment.}
 
 Name:           snakemake
-Version:        7.21.0
+Version:        7.22.0
 Release:        %autorelease 
 Summary:        Workflow management system to create reproducible and scalable data analyses
 
diff --git a/sources b/sources
index 3db7b60..dc0cc22 100644
--- a/sources
+++ b/sources
@@ -1 +1 @@
-SHA512 (snakemake-7.21.0.tar.gz) = a183d5810a4882ff9e31f6cbc157667f6980cbd2bd52d89521bd09161a11511343a69dbbdb2bcc390b14e9d87bc219a58fff8309c56e0fe193bf14f26531b611
+SHA512 (snakemake-7.22.0.tar.gz) = d9d1667edb3f14a89d30ea7be99b8011935bddd2936a2ab81a9ec095c5fd0f7644477d9e4c1b1a08ff4b32a4e397c2923395b7a8a1cbc873c6304447be156412

From 39b75841a0ead26e4aa122621ad54476ec6291e4 Mon Sep 17 00:00:00 2001
From: "Benjamin A. Beasley" <code@musicinmybrain.net>
Date: Sat, 11 Mar 2023 14:26:14 -0500
Subject: [PATCH 04/18] Update to 7.24.1 (close RHBZ#2171148)

---
 .gitignore     | 1 +
 snakemake.spec | 2 +-
 sources        | 2 +-
 3 files changed, 3 insertions(+), 2 deletions(-)

diff --git a/.gitignore b/.gitignore
index 041c205..a116143 100644
--- a/.gitignore
+++ b/.gitignore
@@ -19,3 +19,4 @@
 /snakemake-7.20.0.tar.gz
 /snakemake-7.21.0.tar.gz
 /snakemake-7.22.0.tar.gz
+/snakemake-7.24.1.tar.gz
diff --git a/snakemake.spec b/snakemake.spec
index 4a10894..ca58fc2 100644
--- a/snakemake.spec
+++ b/snakemake.spec
@@ -12,7 +12,7 @@ Finally, Snakemake workflows can entail a description of required software,
 which will be automatically deployed to any execution environment.}
 
 Name:           snakemake
-Version:        7.22.0
+Version:        7.24.1
 Release:        %autorelease 
 Summary:        Workflow management system to create reproducible and scalable data analyses
 
diff --git a/sources b/sources
index dc0cc22..4f23fdb 100644
--- a/sources
+++ b/sources
@@ -1 +1 @@
-SHA512 (snakemake-7.22.0.tar.gz) = d9d1667edb3f14a89d30ea7be99b8011935bddd2936a2ab81a9ec095c5fd0f7644477d9e4c1b1a08ff4b32a4e397c2923395b7a8a1cbc873c6304447be156412
+SHA512 (snakemake-7.24.1.tar.gz) = 6aaccaa62ecc29015cc598f2fbc3d5628af293251ba337c18a3b244d9d479dd22e52f8e052d47f5ccd10a930a20a8521a5646df9bb23b38170c33fc6d40ae452

From 02ba907167b94e145398c29c61e2dd7bab2f5734 Mon Sep 17 00:00:00 2001
From: "Benjamin A. Beasley" <code@musicinmybrain.net>
Date: Sat, 29 Apr 2023 10:17:54 -0400
Subject: [PATCH 05/18] Update to 7.25.2 (close RHBZ#2178275)

---
 .gitignore     | 1 +
 snakemake.spec | 2 +-
 sources        | 2 +-
 3 files changed, 3 insertions(+), 2 deletions(-)

diff --git a/.gitignore b/.gitignore
index a116143..8643933 100644
--- a/.gitignore
+++ b/.gitignore
@@ -20,3 +20,4 @@
 /snakemake-7.21.0.tar.gz
 /snakemake-7.22.0.tar.gz
 /snakemake-7.24.1.tar.gz
+/snakemake-7.25.2.tar.gz
diff --git a/snakemake.spec b/snakemake.spec
index ca58fc2..388ec01 100644
--- a/snakemake.spec
+++ b/snakemake.spec
@@ -12,7 +12,7 @@ Finally, Snakemake workflows can entail a description of required software,
 which will be automatically deployed to any execution environment.}
 
 Name:           snakemake
-Version:        7.24.1
+Version:        7.25.2
 Release:        %autorelease 
 Summary:        Workflow management system to create reproducible and scalable data analyses
 
diff --git a/sources b/sources
index 4f23fdb..b20338e 100644
--- a/sources
+++ b/sources
@@ -1 +1 @@
-SHA512 (snakemake-7.24.1.tar.gz) = 6aaccaa62ecc29015cc598f2fbc3d5628af293251ba337c18a3b244d9d479dd22e52f8e052d47f5ccd10a930a20a8521a5646df9bb23b38170c33fc6d40ae452
+SHA512 (snakemake-7.25.2.tar.gz) = 27cfb3075c62aa165709d0a1aee84d91a68957e22bb265b88e17c7438d531525a2d6ab972bb1323d7f7b5bdca19b0f446b9a30a9beed2dd866b094f67f5102e9

From 21d9bbaf32be9da94f152f64f93c4e3df65781db Mon Sep 17 00:00:00 2001
From: "Benjamin A. Beasley" <code@musicinmybrain.net>
Date: Sat, 6 May 2023 09:01:15 -0400
Subject: [PATCH 06/18] Update to 7.25.3 (close RHBZ#2193279J)

---
 .gitignore     | 1 +
 snakemake.spec | 2 +-
 sources        | 2 +-
 3 files changed, 3 insertions(+), 2 deletions(-)

diff --git a/.gitignore b/.gitignore
index 8643933..0fb2e4e 100644
--- a/.gitignore
+++ b/.gitignore
@@ -21,3 +21,4 @@
 /snakemake-7.22.0.tar.gz
 /snakemake-7.24.1.tar.gz
 /snakemake-7.25.2.tar.gz
+/snakemake-7.25.3.tar.gz
diff --git a/snakemake.spec b/snakemake.spec
index 388ec01..19c7c01 100644
--- a/snakemake.spec
+++ b/snakemake.spec
@@ -12,7 +12,7 @@ Finally, Snakemake workflows can entail a description of required software,
 which will be automatically deployed to any execution environment.}
 
 Name:           snakemake
-Version:        7.25.2
+Version:        7.25.3
 Release:        %autorelease 
 Summary:        Workflow management system to create reproducible and scalable data analyses
 
diff --git a/sources b/sources
index b20338e..604e5a3 100644
--- a/sources
+++ b/sources
@@ -1 +1 @@
-SHA512 (snakemake-7.25.2.tar.gz) = 27cfb3075c62aa165709d0a1aee84d91a68957e22bb265b88e17c7438d531525a2d6ab972bb1323d7f7b5bdca19b0f446b9a30a9beed2dd866b094f67f5102e9
+SHA512 (snakemake-7.25.3.tar.gz) = 795d5345aa7cebafe2c5d251d91a686a9aae8a69e277060ee768a76c64909cd9b1864984a72a4d97f5f5f2ab08b411fa0d9c0c56ca521d6f1dfc8609198354b6

From 934e14efcb651684e1b9ba8f4d1aa9dfb27f2cc5 Mon Sep 17 00:00:00 2001
From: "Benjamin A. Beasley" <code@musicinmybrain.net>
Date: Mon, 22 May 2023 14:50:57 -0400
Subject: [PATCH 07/18] Update to 7.26.0 (close RHBZ#2203471)

---
 .gitignore     | 1 +
 snakemake.spec | 2 +-
 sources        | 2 +-
 3 files changed, 3 insertions(+), 2 deletions(-)

diff --git a/.gitignore b/.gitignore
index 0fb2e4e..ca6ef7d 100644
--- a/.gitignore
+++ b/.gitignore
@@ -22,3 +22,4 @@
 /snakemake-7.24.1.tar.gz
 /snakemake-7.25.2.tar.gz
 /snakemake-7.25.3.tar.gz
+/snakemake-7.26.0.tar.gz
diff --git a/snakemake.spec b/snakemake.spec
index 19c7c01..ffd7e5f 100644
--- a/snakemake.spec
+++ b/snakemake.spec
@@ -12,7 +12,7 @@ Finally, Snakemake workflows can entail a description of required software,
 which will be automatically deployed to any execution environment.}
 
 Name:           snakemake
-Version:        7.25.3
+Version:        7.26.0
 Release:        %autorelease 
 Summary:        Workflow management system to create reproducible and scalable data analyses
 
diff --git a/sources b/sources
index 604e5a3..9610fd4 100644
--- a/sources
+++ b/sources
@@ -1 +1 @@
-SHA512 (snakemake-7.25.3.tar.gz) = 795d5345aa7cebafe2c5d251d91a686a9aae8a69e277060ee768a76c64909cd9b1864984a72a4d97f5f5f2ab08b411fa0d9c0c56ca521d6f1dfc8609198354b6
+SHA512 (snakemake-7.26.0.tar.gz) = cf2cfb80e739dc9c1738a80390d611f774965f87b730aef7d80c70d953969d7f7e4abeb24191146f5fdc8d79ae34c43dbd4fd7753e6aa3eef68e8e74af4d163d

From dd5f87b403a72b8f3d520824a033e1bedcc5e7f2 Mon Sep 17 00:00:00 2001
From: "Benjamin A. Beasley" <code@musicinmybrain.net>
Date: Mon, 22 May 2023 15:04:41 -0400
Subject: [PATCH 08/18] Add a generated man page

---
 snakemake.spec | 15 +++++++++++++++
 1 file changed, 15 insertions(+)

diff --git a/snakemake.spec b/snakemake.spec
index ffd7e5f..3fa0dc7 100644
--- a/snakemake.spec
+++ b/snakemake.spec
@@ -35,6 +35,8 @@ Patch:          snakemake-7.11.0-docs-no-animated-demo.patch
 
 BuildRequires:  python3-devel
 
+BuildRequires:  help2man
+
 %if %{with tests}
 # See test-environment.yml for a listing of test dependencies, along with a lot
 # of other cruft.
@@ -111,6 +113,17 @@ PYTHONPATH="${PWD}" %make_build -C docs latexpdf SPHINXOPTS='%{?_smp_mflags}'
 %pyproject_install
 %pyproject_save_files snakemake
 
+# We wait until %%install to generate the man page so that we can use the
+# proper script entry point. The generated man page is not perfect, but it is
+# good enough to be useful.
+install -d %{buildroot}%{_mandir}/man1
+PATH="${PATH-}:%{buildroot}%{_bindir}" \
+    PYTHONPATH='%{buildroot}%{python3_sitelib}' \
+    help2man --no-info --name='%{summary}' snakemake \
+    > %{buildroot}%{_mandir}/man1/snakemake.1
+# No man page for snakemake-bash-completion since it is not intended for manual
+# invocation.
+
 %check
 %if %{with tests}
 # Lint output “Migrate long run directives into scripts or notebooks …” is
@@ -129,6 +142,8 @@ k="${k-}${k+ and }not test_slurm_"
 
 %files -f %{pyproject_files}
 %{_bindir}/snakemake
+%{_mandir}/man1/snakemake.1*
+
 %{_bindir}/snakemake-bash-completion
 
 %files doc

From 7dd074baa3d65bfd2ec82aed7db6350946de18ed Mon Sep 17 00:00:00 2001
From: "Benjamin A. Beasley" <code@musicinmybrain.net>
Date: Mon, 22 May 2023 15:10:39 -0400
Subject: [PATCH 09/18] Install bash completions

---
 snakemake.spec | 8 ++++++++
 1 file changed, 8 insertions(+)

diff --git a/snakemake.spec b/snakemake.spec
index 3fa0dc7..387881a 100644
--- a/snakemake.spec
+++ b/snakemake.spec
@@ -124,6 +124,13 @@ PATH="${PATH-}:%{buildroot}%{_bindir}" \
 # No man page for snakemake-bash-completion since it is not intended for manual
 # invocation.
 
+# Generate and install shell completions.
+install -d %{buildroot}%{bash_completions_dir}
+PATH="${PATH-}:%{buildroot}%{_bindir}" \
+    PYTHONPATH='%{buildroot}%{python3_sitelib}' \
+    snakemake --bash-completion \
+    > %{buildroot}%{bash_completions_dir}/snakemake.bash
+
 %check
 %if %{with tests}
 # Lint output “Migrate long run directives into scripts or notebooks …” is
@@ -145,6 +152,7 @@ k="${k-}${k+ and }not test_slurm_"
 %{_mandir}/man1/snakemake.1*
 
 %{_bindir}/snakemake-bash-completion
+%{bash_completions_dir}/snakemake.bash
 
 %files doc
 %license LICENSE.md

From e106accc5ff638c45d0537e2bfe972439bfa4615 Mon Sep 17 00:00:00 2001
From: "Benjamin A. Beasley" <code@musicinmybrain.net>
Date: Mon, 22 May 2023 15:20:22 -0400
Subject: [PATCH 10/18] Install vim syntax highlighting support

---
 snakemake.spec | 19 +++++++++++++++++++
 1 file changed, 19 insertions(+)

diff --git a/snakemake.spec b/snakemake.spec
index 387881a..d1c25ae 100644
--- a/snakemake.spec
+++ b/snakemake.spec
@@ -37,6 +37,11 @@ BuildRequires:  python3-devel
 
 BuildRequires:  help2man
 
+BuildRequires:  vim-filesystem
+Requires:       vim-filesystem
+
+Provides:       vim-snakemake = %{version}-%{release}
+
 %if %{with tests}
 # See test-environment.yml for a listing of test dependencies, along with a lot
 # of other cruft.
@@ -88,6 +93,9 @@ sed -r -i 's@"python"@"%{python3}"@g' tests/test_linting.py
 sed -r -i '/sphinxcontrib-napoleon/d' docs/requirements.txt
 # Since pdflatex cannot handle Unicode inputs in general:
 echo "latex_engine = 'xelatex'" >> docs/conf.py
+# Copy and rename vim extensions readme for use in the main documentation
+# directory.
+cp -vp misc/vim/README.md README-vim.md
 
 %generate_buildrequires
 # Generate BR’s for all supported extras to ensure they do not FTI
@@ -131,6 +139,12 @@ PATH="${PATH-}:%{buildroot}%{_bindir}" \
     snakemake --bash-completion \
     > %{buildroot}%{bash_completions_dir}/snakemake.bash
 
+# Install vim syntax highlighting
+install -d '%{buildroot}%{_datadir}/vim/vimfiles'
+cp -vrp misc/vim/* '%{buildroot}%{_datadir}/vim/vimfiles'
+find '%{buildroot}%{_datadir}/vim/vimfiles' \
+    -type f -name 'README.*' -print -delete
+
 %check
 %if %{with tests}
 # Lint output “Migrate long run directives into scripts or notebooks …” is
@@ -154,11 +168,16 @@ k="${k-}${k+ and }not test_slurm_"
 %{_bindir}/snakemake-bash-completion
 %{bash_completions_dir}/snakemake.bash
 
+%{_datadir}/vim/vimfiles/ftdetect/snakemake.vim
+%{_datadir}/vim/vimfiles/ftplugin/snakemake/
+%{_datadir}/vim/vimfiles/syntax/snakemake.vim
+
 %files doc
 %license LICENSE.md
 %doc CHANGELOG.md
 %doc CODE_OF_CONDUCT.md
 %doc README.md
+%doc README-vim.md
 %if %{with doc_pdf}
 %doc docs/_build/latex/Snakemake.pdf
 %endif

From b5bf37d4e2c542cb2244a5eb54afc997170194d5 Mon Sep 17 00:00:00 2001
From: "Benjamin A. Beasley" <code@musicinmybrain.net>
Date: Mon, 22 May 2023 15:44:01 -0400
Subject: [PATCH 11/18] Install nano syntax highlighting support

---
 snakemake.spec | 19 ++++++++++++++++---
 1 file changed, 16 insertions(+), 3 deletions(-)

diff --git a/snakemake.spec b/snakemake.spec
index d1c25ae..f558d06 100644
--- a/snakemake.spec
+++ b/snakemake.spec
@@ -93,9 +93,12 @@ sed -r -i 's@"python"@"%{python3}"@g' tests/test_linting.py
 sed -r -i '/sphinxcontrib-napoleon/d' docs/requirements.txt
 # Since pdflatex cannot handle Unicode inputs in general:
 echo "latex_engine = 'xelatex'" >> docs/conf.py
-# Copy and rename vim extensions readme for use in the main documentation
-# directory.
-cp -vp misc/vim/README.md README-vim.md
+# Copy and rename nano and vim extensions readmes for use in the main
+# documentation directory.
+for editor in nano vim
+do
+  cp -vp "misc/${editor}/README.md" "README-${editor}.md"
+done
 
 %generate_buildrequires
 # Generate BR’s for all supported extras to ensure they do not FTI
@@ -139,6 +142,10 @@ PATH="${PATH-}:%{buildroot}%{_bindir}" \
     snakemake --bash-completion \
     > %{buildroot}%{bash_completions_dir}/snakemake.bash
 
+# Install nano syntax highlighting
+install -t '%{buildroot}%{_datadir}/nano' -D -m 0644 -p \
+    misc/nano/syntax/snakemake.nanorc
+
 # Install vim syntax highlighting
 install -d '%{buildroot}%{_datadir}/vim/vimfiles'
 cp -vrp misc/vim/* '%{buildroot}%{_datadir}/vim/vimfiles'
@@ -168,6 +175,11 @@ k="${k-}${k+ and }not test_slurm_"
 %{_bindir}/snakemake-bash-completion
 %{bash_completions_dir}/snakemake.bash
 
+# This is not owned by the filesystem package, and there is no nano-filesystem
+# subpackage, so we co-own the directory to avoid depending on nano.
+%dir %{_datadir}/nano/
+%{_datadir}/nano/snakemake.nanorc
+
 %{_datadir}/vim/vimfiles/ftdetect/snakemake.vim
 %{_datadir}/vim/vimfiles/ftplugin/snakemake/
 %{_datadir}/vim/vimfiles/syntax/snakemake.vim
@@ -177,6 +189,7 @@ k="${k-}${k+ and }not test_slurm_"
 %doc CHANGELOG.md
 %doc CODE_OF_CONDUCT.md
 %doc README.md
+%doc README-nano.md
 %doc README-vim.md
 %if %{with doc_pdf}
 %doc docs/_build/latex/Snakemake.pdf

From ad3250599da938d3b36b5a96689fc890331802cf Mon Sep 17 00:00:00 2001
From: "Benjamin A. Beasley" <code@musicinmybrain.net>
Date: Thu, 29 Jun 2023 12:26:12 -0400
Subject: [PATCH 12/18] Use new (rpm 4.17.1+) bcond style

---
 snakemake.spec | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/snakemake.spec b/snakemake.spec
index f558d06..f4667cf 100644
--- a/snakemake.spec
+++ b/snakemake.spec
@@ -1,7 +1,7 @@
-%bcond_without tests
+%bcond tests 1
 # Sphinx-generated HTML documentation is not suitable for packaging; see
 # https://bugzilla.redhat.com/show_bug.cgi?id=2006555 for discussion.
-%bcond_without doc_pdf
+%bcond doc_pdf 1
 
 %global _description %{expand:
 The Snakemake workflow management system is a tool to create reproducible and

From 48b1c49075e6de53f4a046bd974a3a755fdc1bd2 Mon Sep 17 00:00:00 2001
From: "Benjamin A. Beasley" <code@musicinmybrain.net>
Date: Thu, 29 Jun 2023 12:33:36 -0400
Subject: [PATCH 13/18] Update to 7.30.1 (close RHBZ#2214110)
MIME-Version: 1.0
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit

- Adds a metapackage for the new “azure” extra
---
 .gitignore     | 1 +
 snakemake.spec | 9 ++++++---
 sources        | 2 +-
 3 files changed, 8 insertions(+), 4 deletions(-)

diff --git a/.gitignore b/.gitignore
index ca6ef7d..466b216 100644
--- a/.gitignore
+++ b/.gitignore
@@ -23,3 +23,4 @@
 /snakemake-7.25.2.tar.gz
 /snakemake-7.25.3.tar.gz
 /snakemake-7.26.0.tar.gz
+/snakemake-7.30.1.tar.gz
diff --git a/snakemake.spec b/snakemake.spec
index f4667cf..21a245b 100644
--- a/snakemake.spec
+++ b/snakemake.spec
@@ -12,7 +12,7 @@ Finally, Snakemake workflows can entail a description of required software,
 which will be automatically deployed to any execution environment.}
 
 Name:           snakemake
-Version:        7.26.0
+Version:        7.30.1
 Release:        %autorelease 
 Summary:        Workflow management system to create reproducible and scalable data analyses
 
@@ -77,7 +77,7 @@ BuildRequires:  /usr/bin/rsvg-convert
 # No metapackage for “pep” extra because the following are not packaged:
 #   - python3-eido
 #   - python3-peppy
-%pyproject_extras_subpkg -n snakemake reports messaging google-cloud
+%pyproject_extras_subpkg -n snakemake reports messaging google-cloud azure
 
 %prep
 %autosetup -n snakemake-%{version} -p1
@@ -102,7 +102,7 @@ done
 
 %generate_buildrequires
 # Generate BR’s for all supported extras to ensure they do not FTI
-%pyproject_buildrequires -x reports,messaging,google-cloud %{?with_doc_pdf:docs/requirements.txt}
+%pyproject_buildrequires -x reports,messaging,google-cloud,azure %{?with_doc_pdf:docs/requirements.txt}
 
 %build
 %pyproject_wheel
@@ -137,6 +137,9 @@ PATH="${PATH-}:%{buildroot}%{_bindir}" \
 
 # Generate and install shell completions.
 install -d %{buildroot}%{bash_completions_dir}
+# Since 7.29.0, snakemake --bash-completion no longer works without a Snakefile
+# https://github.com/snakemake/snakemake/issues/2336
+touch Snakefile
 PATH="${PATH-}:%{buildroot}%{_bindir}" \
     PYTHONPATH='%{buildroot}%{python3_sitelib}' \
     snakemake --bash-completion \
diff --git a/sources b/sources
index 9610fd4..75e5761 100644
--- a/sources
+++ b/sources
@@ -1 +1 @@
-SHA512 (snakemake-7.26.0.tar.gz) = cf2cfb80e739dc9c1738a80390d611f774965f87b730aef7d80c70d953969d7f7e4abeb24191146f5fdc8d79ae34c43dbd4fd7753e6aa3eef68e8e74af4d163d
+SHA512 (snakemake-7.30.1.tar.gz) = 9ffd72d66a4ee91a50d91d28397400112fa195375567cdd8959c5e790c06923c99a7bc036e1e30efcbae3d8d586ef5f3821e18ec01e56497b217899ef7952bc7

From 661eb80d46452cd9eff1b79a934b0fb6d7f55e9b Mon Sep 17 00:00:00 2001
From: "Benjamin A. Beasley" <code@musicinmybrain.net>
Date: Wed, 2 Aug 2023 11:37:41 -0400
Subject: [PATCH 14/18] Update to 7.31.1 (close RHBZ#2224675)

---
 .gitignore     |  1 +
 snakemake.spec | 19 ++++++++++++++++---
 sources        |  2 +-
 3 files changed, 18 insertions(+), 4 deletions(-)

diff --git a/.gitignore b/.gitignore
index 466b216..8b9a7b7 100644
--- a/.gitignore
+++ b/.gitignore
@@ -24,3 +24,4 @@
 /snakemake-7.25.3.tar.gz
 /snakemake-7.26.0.tar.gz
 /snakemake-7.30.1.tar.gz
+/snakemake-7.31.1.tar.gz
diff --git a/snakemake.spec b/snakemake.spec
index 21a245b..f9aac66 100644
--- a/snakemake.spec
+++ b/snakemake.spec
@@ -12,7 +12,7 @@ Finally, Snakemake workflows can entail a description of required software,
 which will be automatically deployed to any execution environment.}
 
 Name:           snakemake
-Version:        7.30.1
+Version:        7.31.1
 Release:        %autorelease 
 Summary:        Workflow management system to create reproducible and scalable data analyses
 
@@ -167,8 +167,21 @@ k="${k-}${k+ and }not test_tes"
 # Require a running slurm instance; maybe this is possible to set up
 # temporarily in the offline build environment, but we don’t know how.
 k="${k-}${k+ and }not test_slurm_"
-# tests/test_google_lifesciences.py needs a network connection (and GCP credentials)
-%pytest -v -k "${k-}" --ignore tests/test_google_lifesciences.py
+
+# Needs a network connection (and GCP credentials):
+ignore="${ignore-} --ignore=tests/test_google_lifesciences.py"
+# ______ ERROR collecting tests/test_conda_python_script/test_script.py ______
+# import file mismatch:
+# imported module 'test_script' has this __file__ attribute:
+#   /builddir/build/BUILD/snakemake-7.31.1/tests/test_conda_python_3_7_script/test_script.py
+# which is not the same as the test file we want to collect:
+#   /builddir/build/BUILD/snakemake-7.31.1/tests/test_conda_python_script/test_script.py
+# HINT: remove __pycache__ / .pyc files and/or use a unique basename for your test file modules
+#
+# Plus, this would add an unwanted BuildRequires on %%{py3_dist Pillow}.
+ignore="${ignore-} --ignore-glob=tests/test_conda_python_3_7_script/*"
+
+%pytest -v -k "${k-}" ${ignore-}
 %endif
 
 %files -f %{pyproject_files}
diff --git a/sources b/sources
index 75e5761..83b8900 100644
--- a/sources
+++ b/sources
@@ -1 +1 @@
-SHA512 (snakemake-7.30.1.tar.gz) = 9ffd72d66a4ee91a50d91d28397400112fa195375567cdd8959c5e790c06923c99a7bc036e1e30efcbae3d8d586ef5f3821e18ec01e56497b217899ef7952bc7
+SHA512 (snakemake-7.31.1.tar.gz) = 4c5c8f993054936a7862652f040ab0e67d4143e493724f79e7e6a7fbd1e39930b040d07eda59bbc5fb63f1b9e47bb4a0a8d695b91647c8a264fed55c252e56fc

From accc35ddf787e494755c6c6050994ee709371e04 Mon Sep 17 00:00:00 2001
From: "Benjamin A. Beasley" <code@musicinmybrain.net>
Date: Fri, 4 Aug 2023 09:53:09 -0400
Subject: [PATCH 15/18] Update to 7.32.0 (close RHBZ#2229001)

---
 .gitignore     | 1 +
 snakemake.spec | 2 +-
 sources        | 2 +-
 3 files changed, 3 insertions(+), 2 deletions(-)

diff --git a/.gitignore b/.gitignore
index 8b9a7b7..c2baa5e 100644
--- a/.gitignore
+++ b/.gitignore
@@ -25,3 +25,4 @@
 /snakemake-7.26.0.tar.gz
 /snakemake-7.30.1.tar.gz
 /snakemake-7.31.1.tar.gz
+/snakemake-7.32.0.tar.gz
diff --git a/snakemake.spec b/snakemake.spec
index f9aac66..215470e 100644
--- a/snakemake.spec
+++ b/snakemake.spec
@@ -12,7 +12,7 @@ Finally, Snakemake workflows can entail a description of required software,
 which will be automatically deployed to any execution environment.}
 
 Name:           snakemake
-Version:        7.31.1
+Version:        7.32.0
 Release:        %autorelease 
 Summary:        Workflow management system to create reproducible and scalable data analyses
 
diff --git a/sources b/sources
index 83b8900..6046fa4 100644
--- a/sources
+++ b/sources
@@ -1 +1 @@
-SHA512 (snakemake-7.31.1.tar.gz) = 4c5c8f993054936a7862652f040ab0e67d4143e493724f79e7e6a7fbd1e39930b040d07eda59bbc5fb63f1b9e47bb4a0a8d695b91647c8a264fed55c252e56fc
+SHA512 (snakemake-7.32.0.tar.gz) = 25ea119d21f5de1652fa8b924f7dc36a1266db7bcc444d473149566002656f09d087487179c9dbbc1167bb0a58d615eb666401d027e48261744f279b1892ee47

From cffcef4887d7ecc71c5c201d0a4ade44b7265ca4 Mon Sep 17 00:00:00 2001
From: Packit <hello@packit.dev>
Date: Thu, 10 Aug 2023 08:56:19 +0000
Subject: [PATCH 16/18] [packit] 7.32.2 upstream release
MIME-Version: 1.0
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit

Upstream tag: v7.32.2
Upstream commit: 1c5d1547

If you need to do any change in this pull request, you need to locally fetch the source branch of it and push it (with a fix) to your fork (as it is not possible to push to the branch created in the Packit’s fork):
```
git fetch https://src.fedoraproject.org/forks/packit/rpms/snakemake.git refs/heads/*:refs/remotes/packit/*
git checkout packit/7.32.2-rawhide-update-pull_from_upstream
```
---
 .gitignore     | 1 +
 README.packit  | 3 +++
 snakemake.spec | 2 +-
 sources        | 2 +-
 4 files changed, 6 insertions(+), 2 deletions(-)
 create mode 100644 README.packit

diff --git a/.gitignore b/.gitignore
index c2baa5e..9675d54 100644
--- a/.gitignore
+++ b/.gitignore
@@ -26,3 +26,4 @@
 /snakemake-7.30.1.tar.gz
 /snakemake-7.31.1.tar.gz
 /snakemake-7.32.0.tar.gz
+/snakemake-7.32.2.tar.gz
diff --git a/README.packit b/README.packit
new file mode 100644
index 0000000..d7c433c
--- /dev/null
+++ b/README.packit
@@ -0,0 +1,3 @@
+This repository is maintained by packit.
+https://packit.dev/
+The file was generated using packit 0.78.2.post2+g81828af.
diff --git a/snakemake.spec b/snakemake.spec
index 215470e..396e3dc 100644
--- a/snakemake.spec
+++ b/snakemake.spec
@@ -12,7 +12,7 @@ Finally, Snakemake workflows can entail a description of required software,
 which will be automatically deployed to any execution environment.}
 
 Name:           snakemake
-Version:        7.32.0
+Version:        7.32.2
 Release:        %autorelease 
 Summary:        Workflow management system to create reproducible and scalable data analyses
 
diff --git a/sources b/sources
index 6046fa4..d99a083 100644
--- a/sources
+++ b/sources
@@ -1 +1 @@
-SHA512 (snakemake-7.32.0.tar.gz) = 25ea119d21f5de1652fa8b924f7dc36a1266db7bcc444d473149566002656f09d087487179c9dbbc1167bb0a58d615eb666401d027e48261744f279b1892ee47
+SHA512 (snakemake-7.32.2.tar.gz) = 4658fa2bbcf2ce68a22d89e74707d5fd364cdcfda5219233dc4605738f83c299c605dbad643a888764b6c5cce1d152f0a37fd9de9e979b95733ed0f7bec8c554

From 3fad9f5840d0e234f12fa42d39338cb3b2d19c89 Mon Sep 17 00:00:00 2001
From: "Benjamin A. Beasley" <code@musicinmybrain.net>
Date: Thu, 10 Aug 2023 09:22:04 -0400
Subject: [PATCH 17/18] Update to 7.32.3

---
 .gitignore     | 1 +
 snakemake.spec | 2 +-
 sources        | 2 +-
 3 files changed, 3 insertions(+), 2 deletions(-)

diff --git a/.gitignore b/.gitignore
index 9675d54..c6a0a09 100644
--- a/.gitignore
+++ b/.gitignore
@@ -27,3 +27,4 @@
 /snakemake-7.31.1.tar.gz
 /snakemake-7.32.0.tar.gz
 /snakemake-7.32.2.tar.gz
+/snakemake-7.32.3.tar.gz
diff --git a/snakemake.spec b/snakemake.spec
index 396e3dc..7b8b3d8 100644
--- a/snakemake.spec
+++ b/snakemake.spec
@@ -12,7 +12,7 @@ Finally, Snakemake workflows can entail a description of required software,
 which will be automatically deployed to any execution environment.}
 
 Name:           snakemake
-Version:        7.32.2
+Version:        7.32.3
 Release:        %autorelease 
 Summary:        Workflow management system to create reproducible and scalable data analyses
 
diff --git a/sources b/sources
index d99a083..0e22ad4 100644
--- a/sources
+++ b/sources
@@ -1 +1 @@
-SHA512 (snakemake-7.32.2.tar.gz) = 4658fa2bbcf2ce68a22d89e74707d5fd364cdcfda5219233dc4605738f83c299c605dbad643a888764b6c5cce1d152f0a37fd9de9e979b95733ed0f7bec8c554
+SHA512 (snakemake-7.32.3.tar.gz) = 675d1206bda44309f38b4cde441584f4c6243c1c63fb3ab07a781e3538c604e66ef013f75a27dd3b11f620611cf583e4e2fca5531a5492cef5cbd85f44f0b77e

From e322b6777a2fe13c978b5f36489409c2cedf18c2 Mon Sep 17 00:00:00 2001
From: Packit <hello@packit.dev>
Date: Mon, 18 Sep 2023 18:56:36 +0000
Subject: [PATCH 18/18] [packit] 7.32.4 upstream release

Upstream tag: v7.32.4
Upstream commit: 0998cc57
---
 .gitignore     | 1 +
 README.packit  | 2 +-
 snakemake.spec | 2 +-
 sources        | 2 +-
 4 files changed, 4 insertions(+), 3 deletions(-)

diff --git a/.gitignore b/.gitignore
index c6a0a09..7635a3f 100644
--- a/.gitignore
+++ b/.gitignore
@@ -28,3 +28,4 @@
 /snakemake-7.32.0.tar.gz
 /snakemake-7.32.2.tar.gz
 /snakemake-7.32.3.tar.gz
+/snakemake-7.32.4.tar.gz
diff --git a/README.packit b/README.packit
index d7c433c..786c2a0 100644
--- a/README.packit
+++ b/README.packit
@@ -1,3 +1,3 @@
 This repository is maintained by packit.
 https://packit.dev/
-The file was generated using packit 0.78.2.post2+g81828af.
+The file was generated using packit 0.80.0.post8+gf2b5fcbc.
diff --git a/snakemake.spec b/snakemake.spec
index 7b8b3d8..46fd73f 100644
--- a/snakemake.spec
+++ b/snakemake.spec
@@ -12,7 +12,7 @@ Finally, Snakemake workflows can entail a description of required software,
 which will be automatically deployed to any execution environment.}
 
 Name:           snakemake
-Version:        7.32.3
+Version:        7.32.4
 Release:        %autorelease 
 Summary:        Workflow management system to create reproducible and scalable data analyses
 
diff --git a/sources b/sources
index 0e22ad4..41d1ecb 100644
--- a/sources
+++ b/sources
@@ -1 +1 @@
-SHA512 (snakemake-7.32.3.tar.gz) = 675d1206bda44309f38b4cde441584f4c6243c1c63fb3ab07a781e3538c604e66ef013f75a27dd3b11f620611cf583e4e2fca5531a5492cef5cbd85f44f0b77e
+SHA512 (snakemake-7.32.4.tar.gz) = 34fef61528b18facab798652c88ed5c698ef02161e023255fdd024b7c7781c4e582cdb04b2740fdff9b6f3600acaec719742984acee57920bb48ef3b5af99d9a