From 5d0c0cc3e0e45a8280a3da7a102dcf0f9159832b Mon Sep 17 00:00:00 2001 From: Mamoru TASAKA Date: Fri, 12 Dec 2025 09:21:56 +0900 Subject: [PATCH 1/8] again switch to git branch --- sources | 2 +- ugene.spec | 4 ++-- 2 files changed, 3 insertions(+), 3 deletions(-) diff --git a/sources b/sources index 76e7d22..b0fa0b5 100644 --- a/sources +++ b/sources @@ -1 +1 @@ -SHA512 (ugene-free-53.0.tar.gz) = 233c857d9a0ea42005efaa53e5ba5162e76a149f01d7406a73bd9215b96c096b3c379cc3b14c7d7b83c61df5ea2435412f6d43c71aef84b23d1d683d5a172b30 +SHA512 (ugene-free-20251211T2210.tar.gz) = da2347edd06051e46bd239000ca7c6c5c96304935fd2463f34dccd2b7c0cb953308feea82e61410c884ddbee45ecc39641f41cb5e021990fc2868672ddc3f7df diff --git a/ugene.spec b/ugene.spec index 7390734..cf1ce88 100644 --- a/ugene.spec +++ b/ugene.spec @@ -21,8 +21,8 @@ %global tarballdate 20251211 %global tarballtime 2210 -%global use_release 1 -%global use_gitbare 0 +%global use_release 0 +%global use_gitbare 1 %if 0%{?use_gitbare} < 1 # force From e0871aedb2e9ffce82355aa94ddf08b2e21e8528 Mon Sep 17 00:00:00 2001 From: Mamoru TASAKA Date: Fri, 19 Dec 2025 13:39:25 +0900 Subject: [PATCH 2/8] update to the latest git --- sources | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/sources b/sources index b0fa0b5..d16ab36 100644 --- a/sources +++ b/sources @@ -1 +1 @@ -SHA512 (ugene-free-20251211T2210.tar.gz) = da2347edd06051e46bd239000ca7c6c5c96304935fd2463f34dccd2b7c0cb953308feea82e61410c884ddbee45ecc39641f41cb5e021990fc2868672ddc3f7df +SHA512 (ugene-free-20251219T1106.tar.gz) = 75b7db1b0b040330ddf52c95e4402c7f3a5ae158cb8a0f29eefbb93941cc51ba5d05c65c6e447c564a95d6677f804679bc55bbd517a3f33aa730c1c3a9fee7b9 From 93d1b3e7e8391b9dc9140e3a57bf963f341122e0 Mon Sep 17 00:00:00 2001 From: Mamoru TASAKA Date: Fri, 19 Dec 2025 13:52:50 +0900 Subject: [PATCH 3/8] update to the latest git --- ugene.spec | 10 +++++----- 1 file changed, 5 insertions(+), 5 deletions(-) diff --git a/ugene.spec b/ugene.spec index cf1ce88..e522710 100644 --- a/ugene.spec +++ b/ugene.spec @@ -2,10 +2,10 @@ %if 0%{?use_release_branch} < 1 # master -%global gitdate 20251211 -%global gitcommit b50ca792f254939978f0ffd3126e3d9ab770a10a +%global gitdate 20251218 +%global gitcommit be1335f210c813e50fb552933af45b67ba20640b # New git commit with non-free part removed using "git filter-branch" -%global gitcommit_free 7e674061492924b3dfbc884c4c9503ecab9887b2 +%global gitcommit_free 267628a8f839fe87c46e840b4420576d69804881 %else # currently 41.0 branch %global gitdate 20250313 @@ -18,8 +18,8 @@ %global shortcommit %(c=%{gitcommit}; echo ${c:0:7}) %global git_version %{gitdate}git%{shortcommit} -%global tarballdate 20251211 -%global tarballtime 2210 +%global tarballdate 20251219 +%global tarballtime 1106 %global use_release 0 %global use_gitbare 1 From 9ddef6af2a0481e9090f99562d5ff109a44aee24 Mon Sep 17 00:00:00 2001 From: Mamoru TASAKA Date: Fri, 19 Dec 2025 14:33:11 +0900 Subject: [PATCH 4/8] rename --- ...verload.patch => ugene-52.1.x-QObject-connect-overload.patch | 0 ugene.spec | 2 +- 2 files changed, 1 insertion(+), 1 deletion(-) rename ugene-52.1.x-RegionSelectorController-overload.patch => ugene-52.1.x-QObject-connect-overload.patch (100%) diff --git a/ugene-52.1.x-RegionSelectorController-overload.patch b/ugene-52.1.x-QObject-connect-overload.patch similarity index 100% rename from ugene-52.1.x-RegionSelectorController-overload.patch rename to ugene-52.1.x-QObject-connect-overload.patch diff --git a/ugene.spec b/ugene.spec index e522710..a44a886 100644 --- a/ugene.spec +++ b/ugene.spec @@ -72,7 +72,7 @@ Source2: create-%{name}-git-bare-tarball.sh # This is not installed Source10: ugene.wrapper Patch1: ugene-49.1-narrowing-for-unsigned-char.patch -Patch3: ugene-52.1.x-RegionSelectorController-overload.patch +Patch3: ugene-52.1.x-QObject-connect-overload.patch # Currently distro-specific Patch102: ugene-44.x-libs_3rdparty-breakpad-sys_mmap_use_system_mmap.patch Patch103: ugene-40.1-libs_3rdparty-breakpad-unwind-nonsupported-arch.patch From 8c74b6abd7e2eec5c63fa2db3055487379565c3e Mon Sep 17 00:00:00 2001 From: Mamoru TASAKA Date: Fri, 19 Dec 2025 14:48:28 +0900 Subject: [PATCH 5/8] update overload patch --- ugene-52.1.x-QObject-connect-overload.patch | 17 +++++++++++++++-- 1 file changed, 15 insertions(+), 2 deletions(-) diff --git a/ugene-52.1.x-QObject-connect-overload.patch b/ugene-52.1.x-QObject-connect-overload.patch index ebc5ad2..1994de8 100644 --- a/ugene-52.1.x-QObject-connect-overload.patch +++ b/ugene-52.1.x-QObject-connect-overload.patch @@ -1,8 +1,8 @@ diff --git a/src/corelibs/U2Gui/src/util/RegionSelectorController.cpp b/src/corelibs/U2Gui/src/util/RegionSelectorController.cpp -index f052b9122..d0fdfeb0d 100644 +index 0b7076cf5..d5f6b7304 100644 --- a/src/corelibs/U2Gui/src/util/RegionSelectorController.cpp +++ b/src/corelibs/U2Gui/src/util/RegionSelectorController.cpp -@@ -339,7 +339,7 @@ void RegionSelectorController::connectSlots() { +@@ -337,7 +337,7 @@ void RegionSelectorController::connectSlots() { connect(gui.startLineEdit, &QLineEdit::textEdited, this, &RegionSelectorController::sl_onRegionChanged); connect(gui.endLineEdit, &QLineEdit::textEdited, this, &RegionSelectorController::sl_onRegionChanged); @@ -11,3 +11,16 @@ index f052b9122..d0fdfeb0d 100644 if (settings.selection != nullptr) { connect(settings.selection, SIGNAL(si_onSelectionChanged(GSelection*)), SLOT(sl_onSelectionChanged(GSelection*))); +diff --git a/src/corelibs/U2View/src/ov_sequence/find_pattern/FindPatternWidget.cpp b/src/corelibs/U2View/src/ov_sequence/find_pattern/FindPatternWidget.cpp +index 531d21d1d..89a2314b4 100644 +--- a/src/corelibs/U2View/src/ov_sequence/find_pattern/FindPatternWidget.cpp ++++ b/src/corelibs/U2View/src/ov_sequence/find_pattern/FindPatternWidget.cpp +@@ -485,7 +485,7 @@ void FindPatternWidget::connectSlots() { + connect(annotatedDnaView->getActiveSequenceContext()->getSequenceObject(), SIGNAL(si_sequenceChanged()), this, SLOT(sl_onSequenceModified())); + + connect(loadFromFileToolButton, SIGNAL(clicked()), SLOT(sl_onFileSelectorClicked())); +- connect(patternSelectorBG, &QButtonGroup::buttonToggled, this, &FindPatternWidget::sl_onFileSelectorToggled); ++ connect(patternSelectorBG, QOverload::of(&QButtonGroup::buttonToggled), this, &FindPatternWidget::sl_onFileSelectorToggled); + + usePatternFromTextEditRadioButton->setChecked(true); + updatePatternSourceControlsUiState(); From 7cc586bb866474b2abc0c130d5311fac15e64f9a Mon Sep 17 00:00:00 2001 From: Mamoru TASAKA Date: Fri, 19 Dec 2025 15:29:56 +0900 Subject: [PATCH 6/8] update patch --- ugene-52.1.x-QObject-connect-overload.patch | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/ugene-52.1.x-QObject-connect-overload.patch b/ugene-52.1.x-QObject-connect-overload.patch index 1994de8..683949c 100644 --- a/ugene-52.1.x-QObject-connect-overload.patch +++ b/ugene-52.1.x-QObject-connect-overload.patch @@ -20,7 +20,7 @@ index 531d21d1d..89a2314b4 100644 connect(loadFromFileToolButton, SIGNAL(clicked()), SLOT(sl_onFileSelectorClicked())); - connect(patternSelectorBG, &QButtonGroup::buttonToggled, this, &FindPatternWidget::sl_onFileSelectorToggled); -+ connect(patternSelectorBG, QOverload::of(&QButtonGroup::buttonToggled), this, &FindPatternWidget::sl_onFileSelectorToggled); ++ connect(patternSelectorBG, QOverload::of(&QButtonGroup::buttonToggled), this, &FindPatternWidget::sl_onFileSelectorToggled); usePatternFromTextEditRadioButton->setChecked(true); updatePatternSourceControlsUiState(); From 660030f91f5a3661ce0c1a2cfc92f22dc8f05323 Mon Sep 17 00:00:00 2001 From: Mamoru TASAKA Date: Fri, 26 Dec 2025 11:40:41 +0900 Subject: [PATCH 7/8] update to the latest git --- sources | 2 +- ugene.spec | 10 +++++----- 2 files changed, 6 insertions(+), 6 deletions(-) diff --git a/sources b/sources index d16ab36..462176c 100644 --- a/sources +++ b/sources @@ -1 +1 @@ -SHA512 (ugene-free-20251219T1106.tar.gz) = 75b7db1b0b040330ddf52c95e4402c7f3a5ae158cb8a0f29eefbb93941cc51ba5d05c65c6e447c564a95d6677f804679bc55bbd517a3f33aa730c1c3a9fee7b9 +SHA512 (ugene-free-20251226T1028.tar.gz) = 607f025a9f96df6613d5d5933198cb07b1f7f022ce4413eb7e47380750b427b4907ddc86c82dc0c2c4c55e7f62146bc8d944925634c71291da9b0b963fa5d320 diff --git a/ugene.spec b/ugene.spec index a44a886..71c7935 100644 --- a/ugene.spec +++ b/ugene.spec @@ -2,10 +2,10 @@ %if 0%{?use_release_branch} < 1 # master -%global gitdate 20251218 -%global gitcommit be1335f210c813e50fb552933af45b67ba20640b +%global gitdate 20251225 +%global gitcommit 5a8eb6377a2ac90fb01266912879ab74fa900a23 # New git commit with non-free part removed using "git filter-branch" -%global gitcommit_free 267628a8f839fe87c46e840b4420576d69804881 +%global gitcommit_free 20efefe450b2b60e55bb52e962f8d44b2ff2d307 %else # currently 41.0 branch %global gitdate 20250313 @@ -18,8 +18,8 @@ %global shortcommit %(c=%{gitcommit}; echo ${c:0:7}) %global git_version %{gitdate}git%{shortcommit} -%global tarballdate 20251219 -%global tarballtime 1106 +%global tarballdate 20251226 +%global tarballtime 1028 %global use_release 0 %global use_gitbare 1 From 4b2f439f927cf09d852a24fb8c5a3a672c84565c Mon Sep 17 00:00:00 2001 From: Mamoru TASAKA Date: Mon, 12 Jan 2026 17:10:43 +0900 Subject: [PATCH 8/8] update to the latest git --- sources | 2 +- ugene.spec | 10 +++++----- 2 files changed, 6 insertions(+), 6 deletions(-) diff --git a/sources b/sources index 462176c..a502e21 100644 --- a/sources +++ b/sources @@ -1 +1 @@ -SHA512 (ugene-free-20251226T1028.tar.gz) = 607f025a9f96df6613d5d5933198cb07b1f7f022ce4413eb7e47380750b427b4907ddc86c82dc0c2c4c55e7f62146bc8d944925634c71291da9b0b963fa5d320 +SHA512 (ugene-free-20260112T1631.tar.gz) = d5f0781caf63ee18f0645d067320191f72f1e06194de76db01268546db745eac80dae063c17b155ce5b74603e3aa4d6f85af165d36e22e380783e8f179e4762f diff --git a/ugene.spec b/ugene.spec index 71c7935..6c9efac 100644 --- a/ugene.spec +++ b/ugene.spec @@ -2,10 +2,10 @@ %if 0%{?use_release_branch} < 1 # master -%global gitdate 20251225 -%global gitcommit 5a8eb6377a2ac90fb01266912879ab74fa900a23 +%global gitdate 20251230 +%global gitcommit 71bdfafe45ac07c04c40ee7bb90456f96b3d8bbc # New git commit with non-free part removed using "git filter-branch" -%global gitcommit_free 20efefe450b2b60e55bb52e962f8d44b2ff2d307 +%global gitcommit_free 0a64d3f2396f1924ef932aed51a50b221e68a88d %else # currently 41.0 branch %global gitdate 20250313 @@ -18,8 +18,8 @@ %global shortcommit %(c=%{gitcommit}; echo ${c:0:7}) %global git_version %{gitdate}git%{shortcommit} -%global tarballdate 20251226 -%global tarballtime 1028 +%global tarballdate 20260112 +%global tarballtime 1631 %global use_release 0 %global use_gitbare 1