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4 changed files with 36 additions and 53 deletions
2
sources
2
sources
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@ -1 +1 @@
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SHA512 (ugene-1.29.0.tar.gz) = 7c4c1e93c6e614cf3e0f71fd82455587815b2c9ab03b0ca86533e97b3d3087c1f9ad8bfa94f73b6487abb5d1afc9578c943cf71f9bce139e5d7dea8568bcc78e
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SHA512 (ugene-1.31.0.tar.gz) = d8cef19ee07fbe94758dbcf33e080a981cefadb1a600898f569daf95b8e1bc69e9b913bd5b80e366596ea1a2db1a981446bdc82989a636a18aa8aea2559c8897
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@ -1,13 +0,0 @@
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diff -ur ugene-1.29.0/src/plugins/external_tool_support/src/bowtie2/Bowtie2Settings.ui ugene-1.29.0-qt510/src/plugins/external_tool_support/src/bowtie2/Bowtie2Settings.ui
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--- ugene-1.29.0/src/plugins/external_tool_support/src/bowtie2/Bowtie2Settings.ui 2017-12-28 08:12:07.000000000 +0100
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+++ ugene-1.29.0-qt510/src/plugins/external_tool_support/src/bowtie2/Bowtie2Settings.ui 2018-01-02 20:00:20.526488538 +0100
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@@ -254,9 +254,6 @@
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<property name="text">
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<string>Disallow gaps (--gbar)</string>
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</property>
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- <property name="shortcut">
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- <string notr="true"/>
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- </property>
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</widget>
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</item>
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</layout>
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24
ugene-1.31.0.patch
Normal file
24
ugene-1.31.0.patch
Normal file
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@ -0,0 +1,24 @@
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diff --git a/src/plugins/external_tool_support/src/trimmomatic/util/LengthSettingsWidget.cpp b/src/plugins/external_tool_support/src/trimmomatic/util/LengthSettingsWidget.cpp
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index a2541b880..f806afef7 100644
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--- a/src/plugins/external_tool_support/src/trimmomatic/util/LengthSettingsWidget.cpp
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+++ b/src/plugins/external_tool_support/src/trimmomatic/util/LengthSettingsWidget.cpp
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@@ -20,6 +20,7 @@
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*/
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#include <U2Core/U2SafePoints.h>
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+#include <QIntValidator>
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#include "LengthSettingsWidget.h"
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#include "LineEditHighlighter.h"
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diff --git a/src/plugins/external_tool_support/src/trimmomatic/util/QualitySettingsWidget.cpp b/src/plugins/external_tool_support/src/trimmomatic/util/QualitySettingsWidget.cpp
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index 00ecfef09..bce841083 100644
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--- a/src/plugins/external_tool_support/src/trimmomatic/util/QualitySettingsWidget.cpp
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+++ b/src/plugins/external_tool_support/src/trimmomatic/util/QualitySettingsWidget.cpp
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@@ -19,6 +19,7 @@
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* MA 02110-1301, USA.
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*/
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+#include <QIntValidator>
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#include <U2Core/U2SafePoints.h>
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#include "QualitySettingsWidget.h"
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50
ugene.spec
50
ugene.spec
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@ -1,20 +1,18 @@
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Name: ugene
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Summary: Integrated bioinformatics toolkit
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Version: 1.29.0
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Release: 6%{?dist}
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Version: 1.31.0
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Release: 4%{?dist}
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#The entire source code is GPLv2+ except:
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#file src/libs_3rdparty/qtbindings_core/src/qtscriptconcurrent.h which is GPLv2
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#files in src/plugins_3rdparty/script_debuger/src/qtscriptdebug/ which are GPLv2
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License: GPLv2+ and GPLv2
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Group: Applications/Engineering
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URL: http://ugene.unipro.ru
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Source0: http://ugene.unipro.ru/downloads/%{name}-%{version}.tar.gz
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# Fix FTBFS with Qt 5.10
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Patch0: ugene-1.29.0-qt510.patch
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URL: http://ugene.net
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Source0: http://ugene.net/downloads/%{name}-%{version}.tar.gz
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Patch0: ugene-1.31.0.patch
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BuildRequires: desktop-file-utils
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BuildRequires: mesa-libGLU-devel
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BuildRequires: procps-devel
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BuildRequires: qt5-qtbase-devel qt5-qtbase-private-devel
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BuildRequires: qt5-qtbase-mysql
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BuildRequires: qt5-qtmultimedia-devel
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@ -69,7 +67,7 @@ desktop-file-validate %{buildroot}/%{_datadir}/applications/%{name}.desktop
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%files
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%{!?_licensedir:%global license %%doc}
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%license COPYRIGHT LICENSE.txt LICENSE.3rd_party.txt
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%license LICENSE.txt LICENSE.3rd_party.txt
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%{_bindir}/*
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%{_libdir}/%{name}/
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%{_datadir}/applications/%{name}.desktop
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@ -80,38 +78,12 @@ desktop-file-validate %{buildroot}/%{_datadir}/applications/%{name}.desktop
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%{_mandir}/man1/*
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%changelog
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* Wed Feb 14 2018 Jan Grulich <jgrulich@redhat.com> - 1.29.0-6
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- rebuild (qt5)
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* Tue Jan 01 2019 Rex Dieter <rdieter@fedoraproject.org> - 1.31.0-4
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- branch rebuild (qt5)
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* Fri Feb 09 2018 Fedora Release Engineering <releng@fedoraproject.org> - 1.29.0-5
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild
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* Sun Aug 26 2018 Rex Dieter <rdieter@fedoraproject.org> - 1.31.0-3
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- (branch) rebuild for qt5
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* Thu Jan 18 2018 Igor Gnatenko <ignatenkobrain@fedoraproject.org> - 1.29.0-4
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- Remove obsolete scriptlets
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* Tue Jan 02 2018 Kevin Kofler <Kevin@tigcc.ticalc.org> - 1.29.0-3
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- Fix FTBFS with Qt 5.10
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* Mon Jan 01 2018 Rex Dieter <rdieter@fedoraproject.org> - 1.29.0-2
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- rebuild (qt5)
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* Sun Dec 31 2017 Yuliya Algaer <yalgaer@fedoraproject.org> - 1.29.0-1
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- New upstream release.
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* Wed Dec 20 2017 Jan Grulich <jgrulich@redhat.com> - 1.28.1-3
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- rebuild (qt5)
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* Mon Nov 27 2017 Rex Dieter <rdieter@fedoraproject.org> - 1.28.1-2
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- rebuild (qt5)
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* Tue Nov 21 2017 Yuliya Algaer <yalgaer@fedoraproject.org> - 1.28.1-1
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- New upstream release.
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* Tue Oct 10 2017 Rex Dieter <rdieter@fedoraproject.org> - 1.27.0-8
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- rebuild (qt5)
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* Mon Aug 28 2017 Yuliya Algaer <yalgaer@fedoraproject.org> - 1.27.0-7
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* Fri Aug 24 2018 Yuliya Algaer <yalgaer@fedoraproject.org> - 1.31.0-2
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- New upstream release
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* Thu Aug 03 2017 Fedora Release Engineering <releng@fedoraproject.org> - 1.26.3-4
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild
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|
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