From 5bd87dbd1dcda253dcdb0de89965363b419cd21b Mon Sep 17 00:00:00 2001 From: Fedora Release Engineering Date: Sat, 20 Jul 2024 08:36:13 +0000 Subject: [PATCH 1/8] Rebuilt for https://fedoraproject.org/wiki/Fedora_41_Mass_Rebuild --- vcftools.spec | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/vcftools.spec b/vcftools.spec index c63f346..5e28dc0 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,6 +1,6 @@ Name: vcftools Version: 0.1.16 -Release: 18%{?dist} +Release: 19%{?dist} Summary: VCF file manipulation tools License: GPLv3 @@ -69,6 +69,9 @@ make check %{_mandir}/man1/vcftools.1.gz %changelog +* Sat Jul 20 2024 Fedora Release Engineering - 0.1.16-19 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_41_Mass_Rebuild + * Sat Jan 27 2024 Fedora Release Engineering - 0.1.16-18 - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild From 864c18990b542227460811acbd1ac6e85de39c1c Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Miroslav=20Such=C3=BD?= Date: Mon, 29 Jul 2024 14:44:32 +0200 Subject: [PATCH 2/8] convert GPLv3 license to SPDX This is part of https://fedoraproject.org/wiki/Changes/SPDX_Licenses_Phase_4 --- vcftools.spec | 8 ++++++-- 1 file changed, 6 insertions(+), 2 deletions(-) diff --git a/vcftools.spec b/vcftools.spec index 5e28dc0..d80043a 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,9 +1,10 @@ Name: vcftools Version: 0.1.16 -Release: 19%{?dist} +Release: 20%{?dist} Summary: VCF file manipulation tools -License: GPLv3 +# Automatically converted from old format: GPLv3 - review is highly recommended. +License: GPL-3.0-only URL: https://vcftools.github.io/ Source0: https://github.com/%{name}/%{name}/releases/download/v%{version}/%{name}-%{version}.tar.gz BuildRequires: make @@ -69,6 +70,9 @@ make check %{_mandir}/man1/vcftools.1.gz %changelog +* Mon Jul 29 2024 Miroslav Suchý - 0.1.16-20 +- convert license to SPDX + * Sat Jul 20 2024 Fedora Release Engineering - 0.1.16-19 - Rebuilt for https://fedoraproject.org/wiki/Fedora_41_Mass_Rebuild From ce392b809ac4a5a04f0d775eb68f5549904d2a6a Mon Sep 17 00:00:00 2001 From: Fedora Release Engineering Date: Sun, 19 Jan 2025 14:08:49 +0000 Subject: [PATCH 3/8] Rebuilt for https://fedoraproject.org/wiki/Fedora_42_Mass_Rebuild --- vcftools.spec | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/vcftools.spec b/vcftools.spec index d80043a..17f5d67 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,6 +1,6 @@ Name: vcftools Version: 0.1.16 -Release: 20%{?dist} +Release: 21%{?dist} Summary: VCF file manipulation tools # Automatically converted from old format: GPLv3 - review is highly recommended. @@ -70,6 +70,9 @@ make check %{_mandir}/man1/vcftools.1.gz %changelog +* Sun Jan 19 2025 Fedora Release Engineering - 0.1.16-21 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_42_Mass_Rebuild + * Mon Jul 29 2024 Miroslav Suchý - 0.1.16-20 - convert license to SPDX From 2074c1fa597a244c1e6660e858d5b54f1a65eea4 Mon Sep 17 00:00:00 2001 From: Fedora Release Engineering Date: Fri, 25 Jul 2025 19:59:11 +0000 Subject: [PATCH 4/8] Rebuilt for https://fedoraproject.org/wiki/Fedora_43_Mass_Rebuild --- vcftools.spec | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/vcftools.spec b/vcftools.spec index 17f5d67..012bc7a 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,6 +1,6 @@ Name: vcftools Version: 0.1.16 -Release: 21%{?dist} +Release: 22%{?dist} Summary: VCF file manipulation tools # Automatically converted from old format: GPLv3 - review is highly recommended. @@ -70,6 +70,9 @@ make check %{_mandir}/man1/vcftools.1.gz %changelog +* Fri Jul 25 2025 Fedora Release Engineering - 0.1.16-22 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_43_Mass_Rebuild + * Sun Jan 19 2025 Fedora Release Engineering - 0.1.16-21 - Rebuilt for https://fedoraproject.org/wiki/Fedora_42_Mass_Rebuild From c5fc28c05e5d5d0abeaac899f14147456f0c45e0 Mon Sep 17 00:00:00 2001 From: Filipe Rosset Date: Sun, 9 Nov 2025 16:00:51 -0300 Subject: [PATCH 5/8] opt-in to autochangelog --- changelog | 156 ++++++++++++++++++++++++++++++++++++++++++++++++ vcftools.spec | 161 +------------------------------------------------- 2 files changed, 158 insertions(+), 159 deletions(-) create mode 100644 changelog diff --git a/changelog b/changelog new file mode 100644 index 0000000..0f37f6f --- /dev/null +++ b/changelog @@ -0,0 +1,156 @@ +* Fri Jul 25 2025 Fedora Release Engineering - 0.1.16-22 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_43_Mass_Rebuild + +* Sun Jan 19 2025 Fedora Release Engineering - 0.1.16-21 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_42_Mass_Rebuild + +* Mon Jul 29 2024 Miroslav Suchý - 0.1.16-20 +- convert license to SPDX + +* Sat Jul 20 2024 Fedora Release Engineering - 0.1.16-19 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_41_Mass_Rebuild + +* Sat Jan 27 2024 Fedora Release Engineering - 0.1.16-18 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild + +* Sat Jul 22 2023 Fedora Release Engineering - 0.1.16-17 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild + +* Sat Jan 21 2023 Fedora Release Engineering - 0.1.16-16 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild + +* Thu Sep 01 2022 Filipe Rosset - 0.1.16-15 +- spec cleanup and modernization + +* Sat Jul 23 2022 Fedora Release Engineering - 0.1.16-14 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild + +* Mon May 30 2022 Jitka Plesnikova - 0.1.16-13 +- Perl 5.36 rebuild + +* Sat Jan 22 2022 Fedora Release Engineering - 0.1.16-12 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild + +* Fri Jul 23 2021 Fedora Release Engineering - 0.1.16-11 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild + +* Fri May 21 2021 Jitka Plesnikova - 0.1.16-10 +- Perl 5.34 rebuild + +* Wed Jan 27 2021 Fedora Release Engineering - 0.1.16-9 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild + +* Wed Jul 29 2020 Fedora Release Engineering - 0.1.16-8 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild + +* Fri Jun 26 2020 Jitka Plesnikova - 0.1.16-7 +- Perl 5.32 re-rebuild of bootstrapped packages + +* Mon Jun 22 2020 Jitka Plesnikova - 0.1.16-6 +- Perl 5.32 rebuild + +* Fri Jan 31 2020 Fedora Release Engineering - 0.1.16-5 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild + +* Sat Jul 27 2019 Fedora Release Engineering - 0.1.16-4 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild + +* Mon Jun 17 2019 Petr Pisar - 0.1.16-3 +- Install Perl modules into a vendor Perl path + +* Sun Feb 03 2019 Fedora Release Engineering - 0.1.16-2 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild + +* Sun Aug 05 2018 Adam Huffman - 0.1.16-1 +- Update to latest upstream release 0.1.16 + +* Sat Jul 14 2018 Fedora Release Engineering - 0.1.15-7 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild + +* Mon Apr 09 2018 Filipe Rosset - 0.1.15-6 +- added gcc-c++ as BR + +* Fri Feb 09 2018 Fedora Release Engineering - 0.1.15-5 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild + +* Thu Aug 03 2017 Fedora Release Engineering - 0.1.15-4 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild + +* Thu Jul 27 2017 Fedora Release Engineering - 0.1.15-3 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild + +* Mon May 15 2017 Fedora Release Engineering - 0.1.15-2 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_27_Mass_Rebuild + +* Fri Apr 21 2017 Filipe Rosset - 0.1.15-1 +- Update to latest upstream release 0.1.15 + +* Sat Feb 11 2017 Fedora Release Engineering - 0.1.14-2 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild + +* Tue Nov 08 2016 Filipe Rosset - 0.1.14-1 +- Update to latest upstream release 0.1.14 +- Fix FTBFS rhbz #1308219 +- Fix rhbz #1365319 thanks to Aram Minasyan +- Spec modernization/clean up, new URLs from GitHub + +* Fri Feb 05 2016 Fedora Release Engineering - 0.1.11-9 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild + +* Fri Jun 19 2015 Fedora Release Engineering - 0.1.11-8 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild + +* Sat May 02 2015 Kalev Lember - 0.1.11-7 +- Rebuilt for GCC 5 C++11 ABI change + +* Mon Aug 18 2014 Fedora Release Engineering - 0.1.11-6 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild + +* Sun Jun 08 2014 Fedora Release Engineering - 0.1.11-5 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_Mass_Rebuild + +* Sat Aug 03 2013 Petr Pisar - 0.1.11-4 +- Perl 5.18 rebuild + +* Tue Jul 30 2013 Peter Robinson 0.1.11-3 +- Use distro CFLAGS (fix FTBFS on ARM) + +* Thu Jul 18 2013 Petr Pisar - 0.1.11-2 +- Perl 5.18 rebuild + +* Wed Jul 03 2013 - 0.1.11-1 +- Update to latest upstream release 0.1.11 + +* Fri Feb 15 2013 Fedora Release Engineering - 0.1.9-2 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_19_Mass_Rebuild + +* Sun Jul 29 2012 - 0.1.9-1 +- Update to 0.1.9 +- Remove perl patch that's no longer needed + +* Thu Jan 5 2012 Adam Huffman - 0.1.7-1 +- update to upstream release 0.1.7 +- remove fill-rsIDs +- update Perl makefile patch + +* Sun Jul 31 2011 Adam Huffman - 0.1.6-1 +- update to 0.1.6 + +* Tue May 3 2011 Adam Huffman - 0.1.5-2 +- minor fix to Jack's Perl patch +- permissions fix +- hardcoded path fix +- cleaner Makefile fix + +* Sun May 1 2011 Jack Tanner - 0.1.5-1 +- bump to 0.1.5 +- rename compare-vcf, merge-vcf, and query-vcf to vcf-compare, + vcf-merge, and vcf-query +- add VcfStats.pm to perl export +- patch perl/Makefile to export VcfStats.pm + +* Mon Mar 21 2011 Adam Huffman - 0.1.4a-1 +- initial version +- fix CPPFLAGS +- fix hardcoded installation location + diff --git a/vcftools.spec b/vcftools.spec index 012bc7a..84d7e3d 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,8 +1,7 @@ Name: vcftools Version: 0.1.16 -Release: 22%{?dist} +Release: %autorelease Summary: VCF file manipulation tools - # Automatically converted from old format: GPLv3 - review is highly recommended. License: GPL-3.0-only URL: https://vcftools.github.io/ @@ -13,7 +12,6 @@ BuildRequires: perl-generators BuildRequires: perl-interpreter BuildRequires: zlib-devel - %description A program package designed for working with VCF files, such as those generated by the 1000 Genomes Project. The aim of VCFtools is to @@ -70,159 +68,4 @@ make check %{_mandir}/man1/vcftools.1.gz %changelog -* Fri Jul 25 2025 Fedora Release Engineering - 0.1.16-22 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_43_Mass_Rebuild - -* Sun Jan 19 2025 Fedora Release Engineering - 0.1.16-21 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_42_Mass_Rebuild - -* Mon Jul 29 2024 Miroslav Suchý - 0.1.16-20 -- convert license to SPDX - -* Sat Jul 20 2024 Fedora Release Engineering - 0.1.16-19 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_41_Mass_Rebuild - -* Sat Jan 27 2024 Fedora Release Engineering - 0.1.16-18 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild - -* Sat Jul 22 2023 Fedora Release Engineering - 0.1.16-17 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild - -* Sat Jan 21 2023 Fedora Release Engineering - 0.1.16-16 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild - -* Thu Sep 01 2022 Filipe Rosset - 0.1.16-15 -- spec cleanup and modernization - -* Sat Jul 23 2022 Fedora Release Engineering - 0.1.16-14 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild - -* Mon May 30 2022 Jitka Plesnikova - 0.1.16-13 -- Perl 5.36 rebuild - -* Sat Jan 22 2022 Fedora Release Engineering - 0.1.16-12 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild - -* Fri Jul 23 2021 Fedora Release Engineering - 0.1.16-11 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild - -* Fri May 21 2021 Jitka Plesnikova - 0.1.16-10 -- Perl 5.34 rebuild - -* Wed Jan 27 2021 Fedora Release Engineering - 0.1.16-9 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild - -* Wed Jul 29 2020 Fedora Release Engineering - 0.1.16-8 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild - -* Fri Jun 26 2020 Jitka Plesnikova - 0.1.16-7 -- Perl 5.32 re-rebuild of bootstrapped packages - -* Mon Jun 22 2020 Jitka Plesnikova - 0.1.16-6 -- Perl 5.32 rebuild - -* Fri Jan 31 2020 Fedora Release Engineering - 0.1.16-5 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild - -* Sat Jul 27 2019 Fedora Release Engineering - 0.1.16-4 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild - -* Mon Jun 17 2019 Petr Pisar - 0.1.16-3 -- Install Perl modules into a vendor Perl path - -* Sun Feb 03 2019 Fedora Release Engineering - 0.1.16-2 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild - -* Sun Aug 05 2018 Adam Huffman - 0.1.16-1 -- Update to latest upstream release 0.1.16 - -* Sat Jul 14 2018 Fedora Release Engineering - 0.1.15-7 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild - -* Mon Apr 09 2018 Filipe Rosset - 0.1.15-6 -- added gcc-c++ as BR - -* Fri Feb 09 2018 Fedora Release Engineering - 0.1.15-5 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild - -* Thu Aug 03 2017 Fedora Release Engineering - 0.1.15-4 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild - -* Thu Jul 27 2017 Fedora Release Engineering - 0.1.15-3 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild - -* Mon May 15 2017 Fedora Release Engineering - 0.1.15-2 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_27_Mass_Rebuild - -* Fri Apr 21 2017 Filipe Rosset - 0.1.15-1 -- Update to latest upstream release 0.1.15 - -* Sat Feb 11 2017 Fedora Release Engineering - 0.1.14-2 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild - -* Tue Nov 08 2016 Filipe Rosset - 0.1.14-1 -- Update to latest upstream release 0.1.14 -- Fix FTBFS rhbz #1308219 -- Fix rhbz #1365319 thanks to Aram Minasyan -- Spec modernization/clean up, new URLs from GitHub - -* Fri Feb 05 2016 Fedora Release Engineering - 0.1.11-9 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild - -* Fri Jun 19 2015 Fedora Release Engineering - 0.1.11-8 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild - -* Sat May 02 2015 Kalev Lember - 0.1.11-7 -- Rebuilt for GCC 5 C++11 ABI change - -* Mon Aug 18 2014 Fedora Release Engineering - 0.1.11-6 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild - -* Sun Jun 08 2014 Fedora Release Engineering - 0.1.11-5 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_Mass_Rebuild - -* Sat Aug 03 2013 Petr Pisar - 0.1.11-4 -- Perl 5.18 rebuild - -* Tue Jul 30 2013 Peter Robinson 0.1.11-3 -- Use distro CFLAGS (fix FTBFS on ARM) - -* Thu Jul 18 2013 Petr Pisar - 0.1.11-2 -- Perl 5.18 rebuild - -* Wed Jul 03 2013 - 0.1.11-1 -- Update to latest upstream release 0.1.11 - -* Fri Feb 15 2013 Fedora Release Engineering - 0.1.9-2 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_19_Mass_Rebuild - -* Sun Jul 29 2012 - 0.1.9-1 -- Update to 0.1.9 -- Remove perl patch that's no longer needed - -* Thu Jan 5 2012 Adam Huffman - 0.1.7-1 -- update to upstream release 0.1.7 -- remove fill-rsIDs -- update Perl makefile patch - -* Sun Jul 31 2011 Adam Huffman - 0.1.6-1 -- update to 0.1.6 - -* Tue May 3 2011 Adam Huffman - 0.1.5-2 -- minor fix to Jack's Perl patch -- permissions fix -- hardcoded path fix -- cleaner Makefile fix - -* Sun May 1 2011 Jack Tanner - 0.1.5-1 -- bump to 0.1.5 -- rename compare-vcf, merge-vcf, and query-vcf to vcf-compare, - vcf-merge, and vcf-query -- add VcfStats.pm to perl export -- patch perl/Makefile to export VcfStats.pm - -* Mon Mar 21 2011 Adam Huffman - 0.1.4a-1 -- initial version -- fix CPPFLAGS -- fix hardcoded installation location - +%autochangelog From 975fa63c92b3634b4bd6650d6d49ef1b73a23cb1 Mon Sep 17 00:00:00 2001 From: Filipe Rosset Date: Sun, 9 Nov 2025 19:26:47 -0300 Subject: [PATCH 6/8] update to 0.1.17 --- .gitignore | 1 + sources | 2 +- vcftools.spec | 2 +- 3 files changed, 3 insertions(+), 2 deletions(-) diff --git a/.gitignore b/.gitignore index 7c0a8bc..61d265c 100644 --- a/.gitignore +++ b/.gitignore @@ -3,3 +3,4 @@ /vcftools-0.1.14.tar.gz /vcftools-0.1.15.tar.gz /vcftools-0.1.16.tar.gz +/vcftools-0.1.17.tar.gz diff --git a/sources b/sources index 1088c67..6131466 100644 --- a/sources +++ b/sources @@ -1 +1 @@ -SHA512 (vcftools-0.1.16.tar.gz) = c4dd5ceb3ad0512e839154d8a05ef3e7a03cbe52c3099df48775b35460fce7ef10102819c2d1cefa33b98ad09e7bd1608e871978860ec9c0b0c2e781892b22e6 +SHA512 (vcftools-0.1.17.tar.gz) = 8adf2490b5d0886302f8f19efc735e4b96d657d70a764b6fa397acdf6f83b54da29dc73e9b96b275a793a511996c415630255610249e6eb5441bc783e82853d9 diff --git a/vcftools.spec b/vcftools.spec index 84d7e3d..ab1d67f 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,5 +1,5 @@ Name: vcftools -Version: 0.1.16 +Version: 0.1.17 Release: %autorelease Summary: VCF file manipulation tools # Automatically converted from old format: GPLv3 - review is highly recommended. From dd682cb08295184f1a6e4350ca0d0951e7eb9154 Mon Sep 17 00:00:00 2001 From: Fedora Release Engineering Date: Sat, 17 Jan 2026 19:48:28 +0000 Subject: [PATCH 7/8] Rebuilt for https://fedoraproject.org/wiki/Fedora_44_Mass_Rebuild From a1d5789906f6f37b48459bf6e9fe3ff4c501f57c Mon Sep 17 00:00:00 2001 From: Fedora Release Engineering Date: Fri, 17 Jul 2026 08:23:13 +0000 Subject: [PATCH 8/8] Rebuilt for https://fedoraproject.org/wiki/Fedora_45_Mass_Rebuild