From 4c6aaff7f0d96c2392cd280654b68f88b10f3640 Mon Sep 17 00:00:00 2001 From: Gwyn Ciesla Date: Thu, 11 Jun 2020 09:24:14 -0500 Subject: [PATCH 01/46] "Adding package.cfg file" --- package.cfg | 2 ++ 1 file changed, 2 insertions(+) create mode 100644 package.cfg diff --git a/package.cfg b/package.cfg new file mode 100644 index 0000000..66ea79d --- /dev/null +++ b/package.cfg @@ -0,0 +1,2 @@ +[koji] +targets = epel8 epel8-playground \ No newline at end of file From c52e641a03aafc2d6b7daff702dc101dce38d29a Mon Sep 17 00:00:00 2001 From: Jitka Plesnikova Date: Mon, 22 Jun 2020 19:26:39 +0200 Subject: [PATCH 02/46] Perl 5.32 rebuild --- vcftools.spec | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/vcftools.spec b/vcftools.spec index 8fbfbdb..d6306c7 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,6 +1,6 @@ Name: vcftools Version: 0.1.16 -Release: 5%{?dist} +Release: 6%{?dist} Summary: VCF file manipulation tools License: GPLv3 @@ -69,6 +69,9 @@ make install DESTDIR=$RPM_BUILD_ROOT INSTALL='install -p' %{_mandir}/man1/vcftools.1.gz %changelog +* Mon Jun 22 2020 Jitka Plesnikova - 0.1.16-6 +- Perl 5.32 rebuild + * Fri Jan 31 2020 Fedora Release Engineering - 0.1.16-5 - Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild From 93d4bd9d48a6a49e2af5c3bccca1384b1f627517 Mon Sep 17 00:00:00 2001 From: Jitka Plesnikova Date: Fri, 26 Jun 2020 17:31:22 +0200 Subject: [PATCH 03/46] Perl 5.32 re-rebuild of bootstrapped packages --- vcftools.spec | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/vcftools.spec b/vcftools.spec index d6306c7..d049db6 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,6 +1,6 @@ Name: vcftools Version: 0.1.16 -Release: 6%{?dist} +Release: 7%{?dist} Summary: VCF file manipulation tools License: GPLv3 @@ -69,6 +69,9 @@ make install DESTDIR=$RPM_BUILD_ROOT INSTALL='install -p' %{_mandir}/man1/vcftools.1.gz %changelog +* Fri Jun 26 2020 Jitka Plesnikova - 0.1.16-7 +- Perl 5.32 re-rebuild of bootstrapped packages + * Mon Jun 22 2020 Jitka Plesnikova - 0.1.16-6 - Perl 5.32 rebuild From 494435ebb6f1090770a378aaea18f9defffdf1ba Mon Sep 17 00:00:00 2001 From: Fedora Release Engineering Date: Wed, 29 Jul 2020 13:34:20 +0000 Subject: [PATCH 04/46] - Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild Signed-off-by: Fedora Release Engineering --- vcftools.spec | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/vcftools.spec b/vcftools.spec index d049db6..2df9aaf 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,6 +1,6 @@ Name: vcftools Version: 0.1.16 -Release: 7%{?dist} +Release: 8%{?dist} Summary: VCF file manipulation tools License: GPLv3 @@ -69,6 +69,9 @@ make install DESTDIR=$RPM_BUILD_ROOT INSTALL='install -p' %{_mandir}/man1/vcftools.1.gz %changelog +* Wed Jul 29 2020 Fedora Release Engineering - 0.1.16-8 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild + * Fri Jun 26 2020 Jitka Plesnikova - 0.1.16-7 - Perl 5.32 re-rebuild of bootstrapped packages From cc3ac6c46a7aab2dc6d5c141c488a85ece4f48b0 Mon Sep 17 00:00:00 2001 From: Troy Dawson Date: Thu, 24 Sep 2020 18:40:55 +0000 Subject: [PATCH 05/46] remove package.cfg per new epel-playground policy --- package.cfg | 2 -- 1 file changed, 2 deletions(-) delete mode 100644 package.cfg diff --git a/package.cfg b/package.cfg deleted file mode 100644 index 66ea79d..0000000 --- a/package.cfg +++ /dev/null @@ -1,2 +0,0 @@ -[koji] -targets = epel8 epel8-playground \ No newline at end of file From 923de24f704bb34f40208c593332e4547159a94b Mon Sep 17 00:00:00 2001 From: Tom Stellard Date: Sat, 9 Jan 2021 00:35:40 +0000 Subject: [PATCH 06/46] Add BuildRequires: make https://fedoraproject.org/wiki/Changes/Remove_make_from_BuildRoot --- vcftools.spec | 1 + 1 file changed, 1 insertion(+) diff --git a/vcftools.spec b/vcftools.spec index 2df9aaf..5e986da 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -6,6 +6,7 @@ Summary: VCF file manipulation tools License: GPLv3 URL: https://vcftools.github.io/ Source0: https://github.com/%{name}/%{name}/releases/download/v%{version}/%{name}-%{version}.tar.gz +BuildRequires: make BuildRequires: gcc-c++ BuildRequires: perl-generators BuildRequires: perl-interpreter From 6a4f8888bcfadfcd4a72142ee91c87b0db2d59c3 Mon Sep 17 00:00:00 2001 From: Fedora Release Engineering Date: Wed, 27 Jan 2021 22:55:54 +0000 Subject: [PATCH 07/46] - Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild Signed-off-by: Fedora Release Engineering --- vcftools.spec | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/vcftools.spec b/vcftools.spec index 5e986da..f91b0fd 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,6 +1,6 @@ Name: vcftools Version: 0.1.16 -Release: 8%{?dist} +Release: 9%{?dist} Summary: VCF file manipulation tools License: GPLv3 @@ -70,6 +70,9 @@ make install DESTDIR=$RPM_BUILD_ROOT INSTALL='install -p' %{_mandir}/man1/vcftools.1.gz %changelog +* Wed Jan 27 2021 Fedora Release Engineering - 0.1.16-9 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild + * Wed Jul 29 2020 Fedora Release Engineering - 0.1.16-8 - Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild From d08fe06165f4dc28bbc839c3f14b6dd9442fe0bf Mon Sep 17 00:00:00 2001 From: Jitka Plesnikova Date: Fri, 21 May 2021 12:03:05 +0200 Subject: [PATCH 08/46] Perl 5.34 rebuild --- vcftools.spec | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/vcftools.spec b/vcftools.spec index f91b0fd..1023105 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,6 +1,6 @@ Name: vcftools Version: 0.1.16 -Release: 9%{?dist} +Release: 10%{?dist} Summary: VCF file manipulation tools License: GPLv3 @@ -70,6 +70,9 @@ make install DESTDIR=$RPM_BUILD_ROOT INSTALL='install -p' %{_mandir}/man1/vcftools.1.gz %changelog +* Fri May 21 2021 Jitka Plesnikova - 0.1.16-10 +- Perl 5.34 rebuild + * Wed Jan 27 2021 Fedora Release Engineering - 0.1.16-9 - Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild From e7fa2d1793b03b9f9890804312e9d67df4d95d5f Mon Sep 17 00:00:00 2001 From: Fedora Release Engineering Date: Fri, 23 Jul 2021 20:19:51 +0000 Subject: [PATCH 09/46] - Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild Signed-off-by: Fedora Release Engineering --- vcftools.spec | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/vcftools.spec b/vcftools.spec index 1023105..98f1bd9 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,6 +1,6 @@ Name: vcftools Version: 0.1.16 -Release: 10%{?dist} +Release: 11%{?dist} Summary: VCF file manipulation tools License: GPLv3 @@ -70,6 +70,9 @@ make install DESTDIR=$RPM_BUILD_ROOT INSTALL='install -p' %{_mandir}/man1/vcftools.1.gz %changelog +* Fri Jul 23 2021 Fedora Release Engineering - 0.1.16-11 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild + * Fri May 21 2021 Jitka Plesnikova - 0.1.16-10 - Perl 5.34 rebuild From dda0c464ceb7e2ff98e3bec309a0b5414ccdfda6 Mon Sep 17 00:00:00 2001 From: Fedora Release Engineering Date: Sat, 22 Jan 2022 03:49:08 +0000 Subject: [PATCH 10/46] - Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild Signed-off-by: Fedora Release Engineering --- vcftools.spec | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/vcftools.spec b/vcftools.spec index 98f1bd9..fb4659e 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,6 +1,6 @@ Name: vcftools Version: 0.1.16 -Release: 11%{?dist} +Release: 12%{?dist} Summary: VCF file manipulation tools License: GPLv3 @@ -70,6 +70,9 @@ make install DESTDIR=$RPM_BUILD_ROOT INSTALL='install -p' %{_mandir}/man1/vcftools.1.gz %changelog +* Sat Jan 22 2022 Fedora Release Engineering - 0.1.16-12 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild + * Fri Jul 23 2021 Fedora Release Engineering - 0.1.16-11 - Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild From 96f12557d4bfb37107f0eaad8ef5ee810fabbb5c Mon Sep 17 00:00:00 2001 From: Jitka Plesnikova Date: Mon, 30 May 2022 19:23:38 +0200 Subject: [PATCH 11/46] Perl 5.36 rebuild --- vcftools.spec | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/vcftools.spec b/vcftools.spec index fb4659e..8c02228 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,6 +1,6 @@ Name: vcftools Version: 0.1.16 -Release: 12%{?dist} +Release: 13%{?dist} Summary: VCF file manipulation tools License: GPLv3 @@ -70,6 +70,9 @@ make install DESTDIR=$RPM_BUILD_ROOT INSTALL='install -p' %{_mandir}/man1/vcftools.1.gz %changelog +* Mon May 30 2022 Jitka Plesnikova - 0.1.16-13 +- Perl 5.36 rebuild + * Sat Jan 22 2022 Fedora Release Engineering - 0.1.16-12 - Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild From 69e293a1c434ffda7723f19245be21d45ba11452 Mon Sep 17 00:00:00 2001 From: Fedora Release Engineering Date: Sat, 23 Jul 2022 11:42:49 +0000 Subject: [PATCH 12/46] Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild Signed-off-by: Fedora Release Engineering --- vcftools.spec | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/vcftools.spec b/vcftools.spec index 8c02228..cbf69f1 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,6 +1,6 @@ Name: vcftools Version: 0.1.16 -Release: 13%{?dist} +Release: 14%{?dist} Summary: VCF file manipulation tools License: GPLv3 @@ -70,6 +70,9 @@ make install DESTDIR=$RPM_BUILD_ROOT INSTALL='install -p' %{_mandir}/man1/vcftools.1.gz %changelog +* Sat Jul 23 2022 Fedora Release Engineering - 0.1.16-14 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild + * Mon May 30 2022 Jitka Plesnikova - 0.1.16-13 - Perl 5.36 rebuild From 3e22238224e4f6a5e9047474aa857596b51dde8f Mon Sep 17 00:00:00 2001 From: Filipe Rosset Date: Thu, 1 Sep 2022 18:45:49 -0300 Subject: [PATCH 13/46] - spec cleanup and modernization --- vcftools.spec | 11 +++++++---- 1 file changed, 7 insertions(+), 4 deletions(-) diff --git a/vcftools.spec b/vcftools.spec index cbf69f1..93b14b7 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,12 +1,12 @@ Name: vcftools Version: 0.1.16 -Release: 14%{?dist} +Release: 15%{?dist} Summary: VCF file manipulation tools License: GPLv3 URL: https://vcftools.github.io/ Source0: https://github.com/%{name}/%{name}/releases/download/v%{version}/%{name}-%{version}.tar.gz -BuildRequires: make +BuildRequires: make BuildRequires: gcc-c++ BuildRequires: perl-generators BuildRequires: perl-interpreter @@ -21,7 +21,7 @@ provide methods for working with VCF files: validating, merging, comparing and calculate some basic population genetic statistics. %prep -%setup -q -n %{name}-%{version} +%autosetup %build %configure --with-pmdir=%(perl -e 'print $ARGV[0] =~ s{\A\Q$ARGV[1]\E/}{}r' \ @@ -32,7 +32,7 @@ comparing and calculate some basic population genetic statistics. make check %install -make install DESTDIR=$RPM_BUILD_ROOT INSTALL='install -p' +%make_install %files @@ -70,6 +70,9 @@ make install DESTDIR=$RPM_BUILD_ROOT INSTALL='install -p' %{_mandir}/man1/vcftools.1.gz %changelog +* Thu Sep 01 2022 Filipe Rosset - 0.1.16-15 +- spec cleanup and modernization + * Sat Jul 23 2022 Fedora Release Engineering - 0.1.16-14 - Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild From acbb7bd7476cba834700ffa7e52a6d72a62c968f Mon Sep 17 00:00:00 2001 From: Jitka Plesnikova Date: Fri, 13 Jan 2023 21:17:49 +0100 Subject: [PATCH 14/46] Remove perl(MODULE_COMPAT), it will be replaced by generators --- vcftools.spec | 1 - 1 file changed, 1 deletion(-) diff --git a/vcftools.spec b/vcftools.spec index 93b14b7..4147ffb 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -11,7 +11,6 @@ BuildRequires: gcc-c++ BuildRequires: perl-generators BuildRequires: perl-interpreter BuildRequires: zlib-devel -Requires: perl(:MODULE_COMPAT_%(eval "`perl -V:version`"; echo $version)) %description From 995ca54fe6f6c9f6db9a83e973356aac78f042a7 Mon Sep 17 00:00:00 2001 From: Fedora Release Engineering Date: Sat, 21 Jan 2023 06:08:05 +0000 Subject: [PATCH 15/46] Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild Signed-off-by: Fedora Release Engineering --- vcftools.spec | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/vcftools.spec b/vcftools.spec index 4147ffb..8bd297b 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,6 +1,6 @@ Name: vcftools Version: 0.1.16 -Release: 15%{?dist} +Release: 16%{?dist} Summary: VCF file manipulation tools License: GPLv3 @@ -69,6 +69,9 @@ make check %{_mandir}/man1/vcftools.1.gz %changelog +* Sat Jan 21 2023 Fedora Release Engineering - 0.1.16-16 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild + * Thu Sep 01 2022 Filipe Rosset - 0.1.16-15 - spec cleanup and modernization From 8250c08d92162844e589a9488de51c127358b3de Mon Sep 17 00:00:00 2001 From: Fedora Release Engineering Date: Sat, 22 Jul 2023 17:27:02 +0000 Subject: [PATCH 16/46] Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild Signed-off-by: Fedora Release Engineering --- vcftools.spec | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/vcftools.spec b/vcftools.spec index 8bd297b..ec61535 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,6 +1,6 @@ Name: vcftools Version: 0.1.16 -Release: 16%{?dist} +Release: 17%{?dist} Summary: VCF file manipulation tools License: GPLv3 @@ -69,6 +69,9 @@ make check %{_mandir}/man1/vcftools.1.gz %changelog +* Sat Jul 22 2023 Fedora Release Engineering - 0.1.16-17 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild + * Sat Jan 21 2023 Fedora Release Engineering - 0.1.16-16 - Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild From 618e4eab0df978633e60d1a093e84ac976ceec8a Mon Sep 17 00:00:00 2001 From: Fedora Release Engineering Date: Sat, 27 Jan 2024 07:32:32 +0000 Subject: [PATCH 17/46] Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild --- vcftools.spec | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/vcftools.spec b/vcftools.spec index ec61535..c63f346 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,6 +1,6 @@ Name: vcftools Version: 0.1.16 -Release: 17%{?dist} +Release: 18%{?dist} Summary: VCF file manipulation tools License: GPLv3 @@ -69,6 +69,9 @@ make check %{_mandir}/man1/vcftools.1.gz %changelog +* Sat Jan 27 2024 Fedora Release Engineering - 0.1.16-18 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild + * Sat Jul 22 2023 Fedora Release Engineering - 0.1.16-17 - Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild From 5bd87dbd1dcda253dcdb0de89965363b419cd21b Mon Sep 17 00:00:00 2001 From: Fedora Release Engineering Date: Sat, 20 Jul 2024 08:36:13 +0000 Subject: [PATCH 18/46] Rebuilt for https://fedoraproject.org/wiki/Fedora_41_Mass_Rebuild --- vcftools.spec | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/vcftools.spec b/vcftools.spec index c63f346..5e28dc0 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,6 +1,6 @@ Name: vcftools Version: 0.1.16 -Release: 18%{?dist} +Release: 19%{?dist} Summary: VCF file manipulation tools License: GPLv3 @@ -69,6 +69,9 @@ make check %{_mandir}/man1/vcftools.1.gz %changelog +* Sat Jul 20 2024 Fedora Release Engineering - 0.1.16-19 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_41_Mass_Rebuild + * Sat Jan 27 2024 Fedora Release Engineering - 0.1.16-18 - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild From 864c18990b542227460811acbd1ac6e85de39c1c Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Miroslav=20Such=C3=BD?= Date: Mon, 29 Jul 2024 14:44:32 +0200 Subject: [PATCH 19/46] convert GPLv3 license to SPDX This is part of https://fedoraproject.org/wiki/Changes/SPDX_Licenses_Phase_4 --- vcftools.spec | 8 ++++++-- 1 file changed, 6 insertions(+), 2 deletions(-) diff --git a/vcftools.spec b/vcftools.spec index 5e28dc0..d80043a 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,9 +1,10 @@ Name: vcftools Version: 0.1.16 -Release: 19%{?dist} +Release: 20%{?dist} Summary: VCF file manipulation tools -License: GPLv3 +# Automatically converted from old format: GPLv3 - review is highly recommended. +License: GPL-3.0-only URL: https://vcftools.github.io/ Source0: https://github.com/%{name}/%{name}/releases/download/v%{version}/%{name}-%{version}.tar.gz BuildRequires: make @@ -69,6 +70,9 @@ make check %{_mandir}/man1/vcftools.1.gz %changelog +* Mon Jul 29 2024 Miroslav Suchý - 0.1.16-20 +- convert license to SPDX + * Sat Jul 20 2024 Fedora Release Engineering - 0.1.16-19 - Rebuilt for https://fedoraproject.org/wiki/Fedora_41_Mass_Rebuild From ce392b809ac4a5a04f0d775eb68f5549904d2a6a Mon Sep 17 00:00:00 2001 From: Fedora Release Engineering Date: Sun, 19 Jan 2025 14:08:49 +0000 Subject: [PATCH 20/46] Rebuilt for https://fedoraproject.org/wiki/Fedora_42_Mass_Rebuild --- vcftools.spec | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/vcftools.spec b/vcftools.spec index d80043a..17f5d67 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,6 +1,6 @@ Name: vcftools Version: 0.1.16 -Release: 20%{?dist} +Release: 21%{?dist} Summary: VCF file manipulation tools # Automatically converted from old format: GPLv3 - review is highly recommended. @@ -70,6 +70,9 @@ make check %{_mandir}/man1/vcftools.1.gz %changelog +* Sun Jan 19 2025 Fedora Release Engineering - 0.1.16-21 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_42_Mass_Rebuild + * Mon Jul 29 2024 Miroslav Suchý - 0.1.16-20 - convert license to SPDX From 2074c1fa597a244c1e6660e858d5b54f1a65eea4 Mon Sep 17 00:00:00 2001 From: Fedora Release Engineering Date: Fri, 25 Jul 2025 19:59:11 +0000 Subject: [PATCH 21/46] Rebuilt for https://fedoraproject.org/wiki/Fedora_43_Mass_Rebuild --- vcftools.spec | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/vcftools.spec b/vcftools.spec index 17f5d67..012bc7a 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,6 +1,6 @@ Name: vcftools Version: 0.1.16 -Release: 21%{?dist} +Release: 22%{?dist} Summary: VCF file manipulation tools # Automatically converted from old format: GPLv3 - review is highly recommended. @@ -70,6 +70,9 @@ make check %{_mandir}/man1/vcftools.1.gz %changelog +* Fri Jul 25 2025 Fedora Release Engineering - 0.1.16-22 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_43_Mass_Rebuild + * Sun Jan 19 2025 Fedora Release Engineering - 0.1.16-21 - Rebuilt for https://fedoraproject.org/wiki/Fedora_42_Mass_Rebuild From c5fc28c05e5d5d0abeaac899f14147456f0c45e0 Mon Sep 17 00:00:00 2001 From: Filipe Rosset Date: Sun, 9 Nov 2025 16:00:51 -0300 Subject: [PATCH 22/46] opt-in to autochangelog --- changelog | 156 ++++++++++++++++++++++++++++++++++++++++++++++++ vcftools.spec | 161 +------------------------------------------------- 2 files changed, 158 insertions(+), 159 deletions(-) create mode 100644 changelog diff --git a/changelog b/changelog new file mode 100644 index 0000000..0f37f6f --- /dev/null +++ b/changelog @@ -0,0 +1,156 @@ +* Fri Jul 25 2025 Fedora Release Engineering - 0.1.16-22 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_43_Mass_Rebuild + +* Sun Jan 19 2025 Fedora Release Engineering - 0.1.16-21 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_42_Mass_Rebuild + +* Mon Jul 29 2024 Miroslav Suchý - 0.1.16-20 +- convert license to SPDX + +* Sat Jul 20 2024 Fedora Release Engineering - 0.1.16-19 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_41_Mass_Rebuild + +* Sat Jan 27 2024 Fedora Release Engineering - 0.1.16-18 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild + +* Sat Jul 22 2023 Fedora Release Engineering - 0.1.16-17 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild + +* Sat Jan 21 2023 Fedora Release Engineering - 0.1.16-16 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild + +* Thu Sep 01 2022 Filipe Rosset - 0.1.16-15 +- spec cleanup and modernization + +* Sat Jul 23 2022 Fedora Release Engineering - 0.1.16-14 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild + +* Mon May 30 2022 Jitka Plesnikova - 0.1.16-13 +- Perl 5.36 rebuild + +* Sat Jan 22 2022 Fedora Release Engineering - 0.1.16-12 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild + +* Fri Jul 23 2021 Fedora Release Engineering - 0.1.16-11 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild + +* Fri May 21 2021 Jitka Plesnikova - 0.1.16-10 +- Perl 5.34 rebuild + +* Wed Jan 27 2021 Fedora Release Engineering - 0.1.16-9 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild + +* Wed Jul 29 2020 Fedora Release Engineering - 0.1.16-8 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild + +* Fri Jun 26 2020 Jitka Plesnikova - 0.1.16-7 +- Perl 5.32 re-rebuild of bootstrapped packages + +* Mon Jun 22 2020 Jitka Plesnikova - 0.1.16-6 +- Perl 5.32 rebuild + +* Fri Jan 31 2020 Fedora Release Engineering - 0.1.16-5 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild + +* Sat Jul 27 2019 Fedora Release Engineering - 0.1.16-4 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild + +* Mon Jun 17 2019 Petr Pisar - 0.1.16-3 +- Install Perl modules into a vendor Perl path + +* Sun Feb 03 2019 Fedora Release Engineering - 0.1.16-2 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild + +* Sun Aug 05 2018 Adam Huffman - 0.1.16-1 +- Update to latest upstream release 0.1.16 + +* Sat Jul 14 2018 Fedora Release Engineering - 0.1.15-7 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild + +* Mon Apr 09 2018 Filipe Rosset - 0.1.15-6 +- added gcc-c++ as BR + +* Fri Feb 09 2018 Fedora Release Engineering - 0.1.15-5 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild + +* Thu Aug 03 2017 Fedora Release Engineering - 0.1.15-4 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild + +* Thu Jul 27 2017 Fedora Release Engineering - 0.1.15-3 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild + +* Mon May 15 2017 Fedora Release Engineering - 0.1.15-2 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_27_Mass_Rebuild + +* Fri Apr 21 2017 Filipe Rosset - 0.1.15-1 +- Update to latest upstream release 0.1.15 + +* Sat Feb 11 2017 Fedora Release Engineering - 0.1.14-2 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild + +* Tue Nov 08 2016 Filipe Rosset - 0.1.14-1 +- Update to latest upstream release 0.1.14 +- Fix FTBFS rhbz #1308219 +- Fix rhbz #1365319 thanks to Aram Minasyan +- Spec modernization/clean up, new URLs from GitHub + +* Fri Feb 05 2016 Fedora Release Engineering - 0.1.11-9 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild + +* Fri Jun 19 2015 Fedora Release Engineering - 0.1.11-8 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild + +* Sat May 02 2015 Kalev Lember - 0.1.11-7 +- Rebuilt for GCC 5 C++11 ABI change + +* Mon Aug 18 2014 Fedora Release Engineering - 0.1.11-6 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild + +* Sun Jun 08 2014 Fedora Release Engineering - 0.1.11-5 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_Mass_Rebuild + +* Sat Aug 03 2013 Petr Pisar - 0.1.11-4 +- Perl 5.18 rebuild + +* Tue Jul 30 2013 Peter Robinson 0.1.11-3 +- Use distro CFLAGS (fix FTBFS on ARM) + +* Thu Jul 18 2013 Petr Pisar - 0.1.11-2 +- Perl 5.18 rebuild + +* Wed Jul 03 2013 - 0.1.11-1 +- Update to latest upstream release 0.1.11 + +* Fri Feb 15 2013 Fedora Release Engineering - 0.1.9-2 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_19_Mass_Rebuild + +* Sun Jul 29 2012 - 0.1.9-1 +- Update to 0.1.9 +- Remove perl patch that's no longer needed + +* Thu Jan 5 2012 Adam Huffman - 0.1.7-1 +- update to upstream release 0.1.7 +- remove fill-rsIDs +- update Perl makefile patch + +* Sun Jul 31 2011 Adam Huffman - 0.1.6-1 +- update to 0.1.6 + +* Tue May 3 2011 Adam Huffman - 0.1.5-2 +- minor fix to Jack's Perl patch +- permissions fix +- hardcoded path fix +- cleaner Makefile fix + +* Sun May 1 2011 Jack Tanner - 0.1.5-1 +- bump to 0.1.5 +- rename compare-vcf, merge-vcf, and query-vcf to vcf-compare, + vcf-merge, and vcf-query +- add VcfStats.pm to perl export +- patch perl/Makefile to export VcfStats.pm + +* Mon Mar 21 2011 Adam Huffman - 0.1.4a-1 +- initial version +- fix CPPFLAGS +- fix hardcoded installation location + diff --git a/vcftools.spec b/vcftools.spec index 012bc7a..84d7e3d 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,8 +1,7 @@ Name: vcftools Version: 0.1.16 -Release: 22%{?dist} +Release: %autorelease Summary: VCF file manipulation tools - # Automatically converted from old format: GPLv3 - review is highly recommended. License: GPL-3.0-only URL: https://vcftools.github.io/ @@ -13,7 +12,6 @@ BuildRequires: perl-generators BuildRequires: perl-interpreter BuildRequires: zlib-devel - %description A program package designed for working with VCF files, such as those generated by the 1000 Genomes Project. The aim of VCFtools is to @@ -70,159 +68,4 @@ make check %{_mandir}/man1/vcftools.1.gz %changelog -* Fri Jul 25 2025 Fedora Release Engineering - 0.1.16-22 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_43_Mass_Rebuild - -* Sun Jan 19 2025 Fedora Release Engineering - 0.1.16-21 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_42_Mass_Rebuild - -* Mon Jul 29 2024 Miroslav Suchý - 0.1.16-20 -- convert license to SPDX - -* Sat Jul 20 2024 Fedora Release Engineering - 0.1.16-19 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_41_Mass_Rebuild - -* Sat Jan 27 2024 Fedora Release Engineering - 0.1.16-18 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild - -* Sat Jul 22 2023 Fedora Release Engineering - 0.1.16-17 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild - -* Sat Jan 21 2023 Fedora Release Engineering - 0.1.16-16 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild - -* Thu Sep 01 2022 Filipe Rosset - 0.1.16-15 -- spec cleanup and modernization - -* Sat Jul 23 2022 Fedora Release Engineering - 0.1.16-14 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild - -* Mon May 30 2022 Jitka Plesnikova - 0.1.16-13 -- Perl 5.36 rebuild - -* Sat Jan 22 2022 Fedora Release Engineering - 0.1.16-12 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild - -* Fri Jul 23 2021 Fedora Release Engineering - 0.1.16-11 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild - -* Fri May 21 2021 Jitka Plesnikova - 0.1.16-10 -- Perl 5.34 rebuild - -* Wed Jan 27 2021 Fedora Release Engineering - 0.1.16-9 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild - -* Wed Jul 29 2020 Fedora Release Engineering - 0.1.16-8 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild - -* Fri Jun 26 2020 Jitka Plesnikova - 0.1.16-7 -- Perl 5.32 re-rebuild of bootstrapped packages - -* Mon Jun 22 2020 Jitka Plesnikova - 0.1.16-6 -- Perl 5.32 rebuild - -* Fri Jan 31 2020 Fedora Release Engineering - 0.1.16-5 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild - -* Sat Jul 27 2019 Fedora Release Engineering - 0.1.16-4 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild - -* Mon Jun 17 2019 Petr Pisar - 0.1.16-3 -- Install Perl modules into a vendor Perl path - -* Sun Feb 03 2019 Fedora Release Engineering - 0.1.16-2 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild - -* Sun Aug 05 2018 Adam Huffman - 0.1.16-1 -- Update to latest upstream release 0.1.16 - -* Sat Jul 14 2018 Fedora Release Engineering - 0.1.15-7 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild - -* Mon Apr 09 2018 Filipe Rosset - 0.1.15-6 -- added gcc-c++ as BR - -* Fri Feb 09 2018 Fedora Release Engineering - 0.1.15-5 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild - -* Thu Aug 03 2017 Fedora Release Engineering - 0.1.15-4 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild - -* Thu Jul 27 2017 Fedora Release Engineering - 0.1.15-3 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild - -* Mon May 15 2017 Fedora Release Engineering - 0.1.15-2 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_27_Mass_Rebuild - -* Fri Apr 21 2017 Filipe Rosset - 0.1.15-1 -- Update to latest upstream release 0.1.15 - -* Sat Feb 11 2017 Fedora Release Engineering - 0.1.14-2 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild - -* Tue Nov 08 2016 Filipe Rosset - 0.1.14-1 -- Update to latest upstream release 0.1.14 -- Fix FTBFS rhbz #1308219 -- Fix rhbz #1365319 thanks to Aram Minasyan -- Spec modernization/clean up, new URLs from GitHub - -* Fri Feb 05 2016 Fedora Release Engineering - 0.1.11-9 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild - -* Fri Jun 19 2015 Fedora Release Engineering - 0.1.11-8 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild - -* Sat May 02 2015 Kalev Lember - 0.1.11-7 -- Rebuilt for GCC 5 C++11 ABI change - -* Mon Aug 18 2014 Fedora Release Engineering - 0.1.11-6 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild - -* Sun Jun 08 2014 Fedora Release Engineering - 0.1.11-5 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_Mass_Rebuild - -* Sat Aug 03 2013 Petr Pisar - 0.1.11-4 -- Perl 5.18 rebuild - -* Tue Jul 30 2013 Peter Robinson 0.1.11-3 -- Use distro CFLAGS (fix FTBFS on ARM) - -* Thu Jul 18 2013 Petr Pisar - 0.1.11-2 -- Perl 5.18 rebuild - -* Wed Jul 03 2013 - 0.1.11-1 -- Update to latest upstream release 0.1.11 - -* Fri Feb 15 2013 Fedora Release Engineering - 0.1.9-2 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_19_Mass_Rebuild - -* Sun Jul 29 2012 - 0.1.9-1 -- Update to 0.1.9 -- Remove perl patch that's no longer needed - -* Thu Jan 5 2012 Adam Huffman - 0.1.7-1 -- update to upstream release 0.1.7 -- remove fill-rsIDs -- update Perl makefile patch - -* Sun Jul 31 2011 Adam Huffman - 0.1.6-1 -- update to 0.1.6 - -* Tue May 3 2011 Adam Huffman - 0.1.5-2 -- minor fix to Jack's Perl patch -- permissions fix -- hardcoded path fix -- cleaner Makefile fix - -* Sun May 1 2011 Jack Tanner - 0.1.5-1 -- bump to 0.1.5 -- rename compare-vcf, merge-vcf, and query-vcf to vcf-compare, - vcf-merge, and vcf-query -- add VcfStats.pm to perl export -- patch perl/Makefile to export VcfStats.pm - -* Mon Mar 21 2011 Adam Huffman - 0.1.4a-1 -- initial version -- fix CPPFLAGS -- fix hardcoded installation location - +%autochangelog From 975fa63c92b3634b4bd6650d6d49ef1b73a23cb1 Mon Sep 17 00:00:00 2001 From: Filipe Rosset Date: Sun, 9 Nov 2025 19:26:47 -0300 Subject: [PATCH 23/46] update to 0.1.17 --- .gitignore | 1 + sources | 2 +- vcftools.spec | 2 +- 3 files changed, 3 insertions(+), 2 deletions(-) diff --git a/.gitignore b/.gitignore index 7c0a8bc..61d265c 100644 --- a/.gitignore +++ b/.gitignore @@ -3,3 +3,4 @@ /vcftools-0.1.14.tar.gz /vcftools-0.1.15.tar.gz /vcftools-0.1.16.tar.gz +/vcftools-0.1.17.tar.gz diff --git a/sources b/sources index 1088c67..6131466 100644 --- a/sources +++ b/sources @@ -1 +1 @@ -SHA512 (vcftools-0.1.16.tar.gz) = c4dd5ceb3ad0512e839154d8a05ef3e7a03cbe52c3099df48775b35460fce7ef10102819c2d1cefa33b98ad09e7bd1608e871978860ec9c0b0c2e781892b22e6 +SHA512 (vcftools-0.1.17.tar.gz) = 8adf2490b5d0886302f8f19efc735e4b96d657d70a764b6fa397acdf6f83b54da29dc73e9b96b275a793a511996c415630255610249e6eb5441bc783e82853d9 diff --git a/vcftools.spec b/vcftools.spec index 84d7e3d..ab1d67f 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,5 +1,5 @@ Name: vcftools -Version: 0.1.16 +Version: 0.1.17 Release: %autorelease Summary: VCF file manipulation tools # Automatically converted from old format: GPLv3 - review is highly recommended. From 25211f9d8fe3076de59194cb5c502547a983b0f0 Mon Sep 17 00:00:00 2001 From: Jitka Plesnikova Date: Mon, 22 Jun 2020 19:26:39 +0200 Subject: [PATCH 24/46] Perl 5.32 rebuild --- vcftools.spec | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/vcftools.spec b/vcftools.spec index 8fbfbdb..d6306c7 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,6 +1,6 @@ Name: vcftools Version: 0.1.16 -Release: 5%{?dist} +Release: 6%{?dist} Summary: VCF file manipulation tools License: GPLv3 @@ -69,6 +69,9 @@ make install DESTDIR=$RPM_BUILD_ROOT INSTALL='install -p' %{_mandir}/man1/vcftools.1.gz %changelog +* Mon Jun 22 2020 Jitka Plesnikova - 0.1.16-6 +- Perl 5.32 rebuild + * Fri Jan 31 2020 Fedora Release Engineering - 0.1.16-5 - Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild From 8871ffc813b2520cad416ccf024376b38d4f3de1 Mon Sep 17 00:00:00 2001 From: Jitka Plesnikova Date: Fri, 26 Jun 2020 17:31:22 +0200 Subject: [PATCH 25/46] Perl 5.32 re-rebuild of bootstrapped packages --- vcftools.spec | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/vcftools.spec b/vcftools.spec index d6306c7..d049db6 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,6 +1,6 @@ Name: vcftools Version: 0.1.16 -Release: 6%{?dist} +Release: 7%{?dist} Summary: VCF file manipulation tools License: GPLv3 @@ -69,6 +69,9 @@ make install DESTDIR=$RPM_BUILD_ROOT INSTALL='install -p' %{_mandir}/man1/vcftools.1.gz %changelog +* Fri Jun 26 2020 Jitka Plesnikova - 0.1.16-7 +- Perl 5.32 re-rebuild of bootstrapped packages + * Mon Jun 22 2020 Jitka Plesnikova - 0.1.16-6 - Perl 5.32 rebuild From 9fe1ed5e57eab3a0d512c26cc82484a262b4209e Mon Sep 17 00:00:00 2001 From: Fedora Release Engineering Date: Wed, 29 Jul 2020 13:34:20 +0000 Subject: [PATCH 26/46] - Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild Signed-off-by: Fedora Release Engineering --- vcftools.spec | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/vcftools.spec b/vcftools.spec index d049db6..2df9aaf 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,6 +1,6 @@ Name: vcftools Version: 0.1.16 -Release: 7%{?dist} +Release: 8%{?dist} Summary: VCF file manipulation tools License: GPLv3 @@ -69,6 +69,9 @@ make install DESTDIR=$RPM_BUILD_ROOT INSTALL='install -p' %{_mandir}/man1/vcftools.1.gz %changelog +* Wed Jul 29 2020 Fedora Release Engineering - 0.1.16-8 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild + * Fri Jun 26 2020 Jitka Plesnikova - 0.1.16-7 - Perl 5.32 re-rebuild of bootstrapped packages From 68bbb0c7151b1c9b1c2f911e2a5c68cc084fe7b8 Mon Sep 17 00:00:00 2001 From: Tom Stellard Date: Sat, 9 Jan 2021 00:35:40 +0000 Subject: [PATCH 27/46] Add BuildRequires: make https://fedoraproject.org/wiki/Changes/Remove_make_from_BuildRoot --- vcftools.spec | 1 + 1 file changed, 1 insertion(+) diff --git a/vcftools.spec b/vcftools.spec index 2df9aaf..5e986da 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -6,6 +6,7 @@ Summary: VCF file manipulation tools License: GPLv3 URL: https://vcftools.github.io/ Source0: https://github.com/%{name}/%{name}/releases/download/v%{version}/%{name}-%{version}.tar.gz +BuildRequires: make BuildRequires: gcc-c++ BuildRequires: perl-generators BuildRequires: perl-interpreter From 80db987d84b62eed3476496f70abe76192d06b4e Mon Sep 17 00:00:00 2001 From: Fedora Release Engineering Date: Wed, 27 Jan 2021 22:55:54 +0000 Subject: [PATCH 28/46] - Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild Signed-off-by: Fedora Release Engineering --- vcftools.spec | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/vcftools.spec b/vcftools.spec index 5e986da..f91b0fd 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,6 +1,6 @@ Name: vcftools Version: 0.1.16 -Release: 8%{?dist} +Release: 9%{?dist} Summary: VCF file manipulation tools License: GPLv3 @@ -70,6 +70,9 @@ make install DESTDIR=$RPM_BUILD_ROOT INSTALL='install -p' %{_mandir}/man1/vcftools.1.gz %changelog +* Wed Jan 27 2021 Fedora Release Engineering - 0.1.16-9 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild + * Wed Jul 29 2020 Fedora Release Engineering - 0.1.16-8 - Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild From 98d926f7bd93d205874daf51297c596fe9460fdb Mon Sep 17 00:00:00 2001 From: Jitka Plesnikova Date: Fri, 21 May 2021 12:03:05 +0200 Subject: [PATCH 29/46] Perl 5.34 rebuild --- vcftools.spec | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/vcftools.spec b/vcftools.spec index f91b0fd..1023105 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,6 +1,6 @@ Name: vcftools Version: 0.1.16 -Release: 9%{?dist} +Release: 10%{?dist} Summary: VCF file manipulation tools License: GPLv3 @@ -70,6 +70,9 @@ make install DESTDIR=$RPM_BUILD_ROOT INSTALL='install -p' %{_mandir}/man1/vcftools.1.gz %changelog +* Fri May 21 2021 Jitka Plesnikova - 0.1.16-10 +- Perl 5.34 rebuild + * Wed Jan 27 2021 Fedora Release Engineering - 0.1.16-9 - Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild From b1789eed9222e03a01e08b2e34e0265eb27d3c76 Mon Sep 17 00:00:00 2001 From: Fedora Release Engineering Date: Fri, 23 Jul 2021 20:19:51 +0000 Subject: [PATCH 30/46] - Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild Signed-off-by: Fedora Release Engineering --- vcftools.spec | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/vcftools.spec b/vcftools.spec index 1023105..98f1bd9 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,6 +1,6 @@ Name: vcftools Version: 0.1.16 -Release: 10%{?dist} +Release: 11%{?dist} Summary: VCF file manipulation tools License: GPLv3 @@ -70,6 +70,9 @@ make install DESTDIR=$RPM_BUILD_ROOT INSTALL='install -p' %{_mandir}/man1/vcftools.1.gz %changelog +* Fri Jul 23 2021 Fedora Release Engineering - 0.1.16-11 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild + * Fri May 21 2021 Jitka Plesnikova - 0.1.16-10 - Perl 5.34 rebuild From 27a1b62a12f8e14578c94a5b587de885b8e305cf Mon Sep 17 00:00:00 2001 From: Fedora Release Engineering Date: Sat, 22 Jan 2022 03:49:08 +0000 Subject: [PATCH 31/46] - Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild Signed-off-by: Fedora Release Engineering --- vcftools.spec | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/vcftools.spec b/vcftools.spec index 98f1bd9..fb4659e 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,6 +1,6 @@ Name: vcftools Version: 0.1.16 -Release: 11%{?dist} +Release: 12%{?dist} Summary: VCF file manipulation tools License: GPLv3 @@ -70,6 +70,9 @@ make install DESTDIR=$RPM_BUILD_ROOT INSTALL='install -p' %{_mandir}/man1/vcftools.1.gz %changelog +* Sat Jan 22 2022 Fedora Release Engineering - 0.1.16-12 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild + * Fri Jul 23 2021 Fedora Release Engineering - 0.1.16-11 - Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild From 09b2ef088e76faef64ac390be945d853e3cd3a9e Mon Sep 17 00:00:00 2001 From: Jitka Plesnikova Date: Mon, 30 May 2022 19:23:38 +0200 Subject: [PATCH 32/46] Perl 5.36 rebuild --- vcftools.spec | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/vcftools.spec b/vcftools.spec index fb4659e..8c02228 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,6 +1,6 @@ Name: vcftools Version: 0.1.16 -Release: 12%{?dist} +Release: 13%{?dist} Summary: VCF file manipulation tools License: GPLv3 @@ -70,6 +70,9 @@ make install DESTDIR=$RPM_BUILD_ROOT INSTALL='install -p' %{_mandir}/man1/vcftools.1.gz %changelog +* Mon May 30 2022 Jitka Plesnikova - 0.1.16-13 +- Perl 5.36 rebuild + * Sat Jan 22 2022 Fedora Release Engineering - 0.1.16-12 - Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild From e3ac2645ea60f114a1e658e6270894d5f94032f4 Mon Sep 17 00:00:00 2001 From: Fedora Release Engineering Date: Sat, 23 Jul 2022 11:42:49 +0000 Subject: [PATCH 33/46] Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild Signed-off-by: Fedora Release Engineering --- vcftools.spec | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/vcftools.spec b/vcftools.spec index 8c02228..cbf69f1 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,6 +1,6 @@ Name: vcftools Version: 0.1.16 -Release: 13%{?dist} +Release: 14%{?dist} Summary: VCF file manipulation tools License: GPLv3 @@ -70,6 +70,9 @@ make install DESTDIR=$RPM_BUILD_ROOT INSTALL='install -p' %{_mandir}/man1/vcftools.1.gz %changelog +* Sat Jul 23 2022 Fedora Release Engineering - 0.1.16-14 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild + * Mon May 30 2022 Jitka Plesnikova - 0.1.16-13 - Perl 5.36 rebuild From 5db9024fe148dc24284ec57be4e69a9303ddfa7c Mon Sep 17 00:00:00 2001 From: Filipe Rosset Date: Thu, 1 Sep 2022 18:45:49 -0300 Subject: [PATCH 34/46] - spec cleanup and modernization --- vcftools.spec | 11 +++++++---- 1 file changed, 7 insertions(+), 4 deletions(-) diff --git a/vcftools.spec b/vcftools.spec index cbf69f1..93b14b7 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,12 +1,12 @@ Name: vcftools Version: 0.1.16 -Release: 14%{?dist} +Release: 15%{?dist} Summary: VCF file manipulation tools License: GPLv3 URL: https://vcftools.github.io/ Source0: https://github.com/%{name}/%{name}/releases/download/v%{version}/%{name}-%{version}.tar.gz -BuildRequires: make +BuildRequires: make BuildRequires: gcc-c++ BuildRequires: perl-generators BuildRequires: perl-interpreter @@ -21,7 +21,7 @@ provide methods for working with VCF files: validating, merging, comparing and calculate some basic population genetic statistics. %prep -%setup -q -n %{name}-%{version} +%autosetup %build %configure --with-pmdir=%(perl -e 'print $ARGV[0] =~ s{\A\Q$ARGV[1]\E/}{}r' \ @@ -32,7 +32,7 @@ comparing and calculate some basic population genetic statistics. make check %install -make install DESTDIR=$RPM_BUILD_ROOT INSTALL='install -p' +%make_install %files @@ -70,6 +70,9 @@ make install DESTDIR=$RPM_BUILD_ROOT INSTALL='install -p' %{_mandir}/man1/vcftools.1.gz %changelog +* Thu Sep 01 2022 Filipe Rosset - 0.1.16-15 +- spec cleanup and modernization + * Sat Jul 23 2022 Fedora Release Engineering - 0.1.16-14 - Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild From 2f45c4e09781fb7be48cd9d57a84867b6edcc825 Mon Sep 17 00:00:00 2001 From: Jitka Plesnikova Date: Fri, 13 Jan 2023 21:17:49 +0100 Subject: [PATCH 35/46] Remove perl(MODULE_COMPAT), it will be replaced by generators --- vcftools.spec | 1 - 1 file changed, 1 deletion(-) diff --git a/vcftools.spec b/vcftools.spec index 93b14b7..4147ffb 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -11,7 +11,6 @@ BuildRequires: gcc-c++ BuildRequires: perl-generators BuildRequires: perl-interpreter BuildRequires: zlib-devel -Requires: perl(:MODULE_COMPAT_%(eval "`perl -V:version`"; echo $version)) %description From 406af38f0d15858fbd0a427a178d2b13061cca68 Mon Sep 17 00:00:00 2001 From: Fedora Release Engineering Date: Sat, 21 Jan 2023 06:08:05 +0000 Subject: [PATCH 36/46] Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild Signed-off-by: Fedora Release Engineering --- vcftools.spec | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/vcftools.spec b/vcftools.spec index 4147ffb..8bd297b 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,6 +1,6 @@ Name: vcftools Version: 0.1.16 -Release: 15%{?dist} +Release: 16%{?dist} Summary: VCF file manipulation tools License: GPLv3 @@ -69,6 +69,9 @@ make check %{_mandir}/man1/vcftools.1.gz %changelog +* Sat Jan 21 2023 Fedora Release Engineering - 0.1.16-16 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild + * Thu Sep 01 2022 Filipe Rosset - 0.1.16-15 - spec cleanup and modernization From f4f675ff639ffeeec2f4f6013a3d466c58c77e8c Mon Sep 17 00:00:00 2001 From: Fedora Release Engineering Date: Sat, 22 Jul 2023 17:27:02 +0000 Subject: [PATCH 37/46] Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild Signed-off-by: Fedora Release Engineering --- vcftools.spec | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/vcftools.spec b/vcftools.spec index 8bd297b..ec61535 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,6 +1,6 @@ Name: vcftools Version: 0.1.16 -Release: 16%{?dist} +Release: 17%{?dist} Summary: VCF file manipulation tools License: GPLv3 @@ -69,6 +69,9 @@ make check %{_mandir}/man1/vcftools.1.gz %changelog +* Sat Jul 22 2023 Fedora Release Engineering - 0.1.16-17 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild + * Sat Jan 21 2023 Fedora Release Engineering - 0.1.16-16 - Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild From 8863484f61f4b5635ce40d7229ac24d414d802b0 Mon Sep 17 00:00:00 2001 From: Fedora Release Engineering Date: Sat, 27 Jan 2024 07:32:32 +0000 Subject: [PATCH 38/46] Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild --- vcftools.spec | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/vcftools.spec b/vcftools.spec index ec61535..c63f346 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,6 +1,6 @@ Name: vcftools Version: 0.1.16 -Release: 17%{?dist} +Release: 18%{?dist} Summary: VCF file manipulation tools License: GPLv3 @@ -69,6 +69,9 @@ make check %{_mandir}/man1/vcftools.1.gz %changelog +* Sat Jan 27 2024 Fedora Release Engineering - 0.1.16-18 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild + * Sat Jul 22 2023 Fedora Release Engineering - 0.1.16-17 - Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild From e8d60e94888f732ce4dea6f50d631d2562139792 Mon Sep 17 00:00:00 2001 From: Fedora Release Engineering Date: Sat, 20 Jul 2024 08:36:13 +0000 Subject: [PATCH 39/46] Rebuilt for https://fedoraproject.org/wiki/Fedora_41_Mass_Rebuild --- vcftools.spec | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/vcftools.spec b/vcftools.spec index c63f346..5e28dc0 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,6 +1,6 @@ Name: vcftools Version: 0.1.16 -Release: 18%{?dist} +Release: 19%{?dist} Summary: VCF file manipulation tools License: GPLv3 @@ -69,6 +69,9 @@ make check %{_mandir}/man1/vcftools.1.gz %changelog +* Sat Jul 20 2024 Fedora Release Engineering - 0.1.16-19 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_41_Mass_Rebuild + * Sat Jan 27 2024 Fedora Release Engineering - 0.1.16-18 - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild From 9109177221bd488993505b6f5a5e58a601fdb522 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Miroslav=20Such=C3=BD?= Date: Mon, 29 Jul 2024 14:44:32 +0200 Subject: [PATCH 40/46] convert GPLv3 license to SPDX This is part of https://fedoraproject.org/wiki/Changes/SPDX_Licenses_Phase_4 --- vcftools.spec | 8 ++++++-- 1 file changed, 6 insertions(+), 2 deletions(-) diff --git a/vcftools.spec b/vcftools.spec index 5e28dc0..d80043a 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,9 +1,10 @@ Name: vcftools Version: 0.1.16 -Release: 19%{?dist} +Release: 20%{?dist} Summary: VCF file manipulation tools -License: GPLv3 +# Automatically converted from old format: GPLv3 - review is highly recommended. +License: GPL-3.0-only URL: https://vcftools.github.io/ Source0: https://github.com/%{name}/%{name}/releases/download/v%{version}/%{name}-%{version}.tar.gz BuildRequires: make @@ -69,6 +70,9 @@ make check %{_mandir}/man1/vcftools.1.gz %changelog +* Mon Jul 29 2024 Miroslav Suchý - 0.1.16-20 +- convert license to SPDX + * Sat Jul 20 2024 Fedora Release Engineering - 0.1.16-19 - Rebuilt for https://fedoraproject.org/wiki/Fedora_41_Mass_Rebuild From 5d67a619e1d96ca8bbf8c3097e20d206df36d8ec Mon Sep 17 00:00:00 2001 From: Fedora Release Engineering Date: Sun, 19 Jan 2025 14:08:49 +0000 Subject: [PATCH 41/46] Rebuilt for https://fedoraproject.org/wiki/Fedora_42_Mass_Rebuild --- vcftools.spec | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/vcftools.spec b/vcftools.spec index d80043a..17f5d67 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,6 +1,6 @@ Name: vcftools Version: 0.1.16 -Release: 20%{?dist} +Release: 21%{?dist} Summary: VCF file manipulation tools # Automatically converted from old format: GPLv3 - review is highly recommended. @@ -70,6 +70,9 @@ make check %{_mandir}/man1/vcftools.1.gz %changelog +* Sun Jan 19 2025 Fedora Release Engineering - 0.1.16-21 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_42_Mass_Rebuild + * Mon Jul 29 2024 Miroslav Suchý - 0.1.16-20 - convert license to SPDX From 54eec6e7421b92bd6c180eba41825773ac3a3985 Mon Sep 17 00:00:00 2001 From: Fedora Release Engineering Date: Fri, 25 Jul 2025 19:59:11 +0000 Subject: [PATCH 42/46] Rebuilt for https://fedoraproject.org/wiki/Fedora_43_Mass_Rebuild --- vcftools.spec | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/vcftools.spec b/vcftools.spec index 17f5d67..012bc7a 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,6 +1,6 @@ Name: vcftools Version: 0.1.16 -Release: 21%{?dist} +Release: 22%{?dist} Summary: VCF file manipulation tools # Automatically converted from old format: GPLv3 - review is highly recommended. @@ -70,6 +70,9 @@ make check %{_mandir}/man1/vcftools.1.gz %changelog +* Fri Jul 25 2025 Fedora Release Engineering - 0.1.16-22 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_43_Mass_Rebuild + * Sun Jan 19 2025 Fedora Release Engineering - 0.1.16-21 - Rebuilt for https://fedoraproject.org/wiki/Fedora_42_Mass_Rebuild From d7aae5c3d8232d472cbd8c162a331c218b2b35f8 Mon Sep 17 00:00:00 2001 From: Filipe Rosset Date: Sun, 9 Nov 2025 16:00:51 -0300 Subject: [PATCH 43/46] opt-in to autochangelog --- changelog | 156 ++++++++++++++++++++++++++++++++++++++++++++++++ vcftools.spec | 161 +------------------------------------------------- 2 files changed, 158 insertions(+), 159 deletions(-) create mode 100644 changelog diff --git a/changelog b/changelog new file mode 100644 index 0000000..0f37f6f --- /dev/null +++ b/changelog @@ -0,0 +1,156 @@ +* Fri Jul 25 2025 Fedora Release Engineering - 0.1.16-22 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_43_Mass_Rebuild + +* Sun Jan 19 2025 Fedora Release Engineering - 0.1.16-21 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_42_Mass_Rebuild + +* Mon Jul 29 2024 Miroslav Suchý - 0.1.16-20 +- convert license to SPDX + +* Sat Jul 20 2024 Fedora Release Engineering - 0.1.16-19 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_41_Mass_Rebuild + +* Sat Jan 27 2024 Fedora Release Engineering - 0.1.16-18 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild + +* Sat Jul 22 2023 Fedora Release Engineering - 0.1.16-17 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild + +* Sat Jan 21 2023 Fedora Release Engineering - 0.1.16-16 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild + +* Thu Sep 01 2022 Filipe Rosset - 0.1.16-15 +- spec cleanup and modernization + +* Sat Jul 23 2022 Fedora Release Engineering - 0.1.16-14 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild + +* Mon May 30 2022 Jitka Plesnikova - 0.1.16-13 +- Perl 5.36 rebuild + +* Sat Jan 22 2022 Fedora Release Engineering - 0.1.16-12 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild + +* Fri Jul 23 2021 Fedora Release Engineering - 0.1.16-11 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild + +* Fri May 21 2021 Jitka Plesnikova - 0.1.16-10 +- Perl 5.34 rebuild + +* Wed Jan 27 2021 Fedora Release Engineering - 0.1.16-9 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild + +* Wed Jul 29 2020 Fedora Release Engineering - 0.1.16-8 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild + +* Fri Jun 26 2020 Jitka Plesnikova - 0.1.16-7 +- Perl 5.32 re-rebuild of bootstrapped packages + +* Mon Jun 22 2020 Jitka Plesnikova - 0.1.16-6 +- Perl 5.32 rebuild + +* Fri Jan 31 2020 Fedora Release Engineering - 0.1.16-5 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild + +* Sat Jul 27 2019 Fedora Release Engineering - 0.1.16-4 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild + +* Mon Jun 17 2019 Petr Pisar - 0.1.16-3 +- Install Perl modules into a vendor Perl path + +* Sun Feb 03 2019 Fedora Release Engineering - 0.1.16-2 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild + +* Sun Aug 05 2018 Adam Huffman - 0.1.16-1 +- Update to latest upstream release 0.1.16 + +* Sat Jul 14 2018 Fedora Release Engineering - 0.1.15-7 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild + +* Mon Apr 09 2018 Filipe Rosset - 0.1.15-6 +- added gcc-c++ as BR + +* Fri Feb 09 2018 Fedora Release Engineering - 0.1.15-5 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild + +* Thu Aug 03 2017 Fedora Release Engineering - 0.1.15-4 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild + +* Thu Jul 27 2017 Fedora Release Engineering - 0.1.15-3 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild + +* Mon May 15 2017 Fedora Release Engineering - 0.1.15-2 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_27_Mass_Rebuild + +* Fri Apr 21 2017 Filipe Rosset - 0.1.15-1 +- Update to latest upstream release 0.1.15 + +* Sat Feb 11 2017 Fedora Release Engineering - 0.1.14-2 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild + +* Tue Nov 08 2016 Filipe Rosset - 0.1.14-1 +- Update to latest upstream release 0.1.14 +- Fix FTBFS rhbz #1308219 +- Fix rhbz #1365319 thanks to Aram Minasyan +- Spec modernization/clean up, new URLs from GitHub + +* Fri Feb 05 2016 Fedora Release Engineering - 0.1.11-9 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild + +* Fri Jun 19 2015 Fedora Release Engineering - 0.1.11-8 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild + +* Sat May 02 2015 Kalev Lember - 0.1.11-7 +- Rebuilt for GCC 5 C++11 ABI change + +* Mon Aug 18 2014 Fedora Release Engineering - 0.1.11-6 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild + +* Sun Jun 08 2014 Fedora Release Engineering - 0.1.11-5 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_Mass_Rebuild + +* Sat Aug 03 2013 Petr Pisar - 0.1.11-4 +- Perl 5.18 rebuild + +* Tue Jul 30 2013 Peter Robinson 0.1.11-3 +- Use distro CFLAGS (fix FTBFS on ARM) + +* Thu Jul 18 2013 Petr Pisar - 0.1.11-2 +- Perl 5.18 rebuild + +* Wed Jul 03 2013 - 0.1.11-1 +- Update to latest upstream release 0.1.11 + +* Fri Feb 15 2013 Fedora Release Engineering - 0.1.9-2 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_19_Mass_Rebuild + +* Sun Jul 29 2012 - 0.1.9-1 +- Update to 0.1.9 +- Remove perl patch that's no longer needed + +* Thu Jan 5 2012 Adam Huffman - 0.1.7-1 +- update to upstream release 0.1.7 +- remove fill-rsIDs +- update Perl makefile patch + +* Sun Jul 31 2011 Adam Huffman - 0.1.6-1 +- update to 0.1.6 + +* Tue May 3 2011 Adam Huffman - 0.1.5-2 +- minor fix to Jack's Perl patch +- permissions fix +- hardcoded path fix +- cleaner Makefile fix + +* Sun May 1 2011 Jack Tanner - 0.1.5-1 +- bump to 0.1.5 +- rename compare-vcf, merge-vcf, and query-vcf to vcf-compare, + vcf-merge, and vcf-query +- add VcfStats.pm to perl export +- patch perl/Makefile to export VcfStats.pm + +* Mon Mar 21 2011 Adam Huffman - 0.1.4a-1 +- initial version +- fix CPPFLAGS +- fix hardcoded installation location + diff --git a/vcftools.spec b/vcftools.spec index 012bc7a..84d7e3d 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,8 +1,7 @@ Name: vcftools Version: 0.1.16 -Release: 22%{?dist} +Release: %autorelease Summary: VCF file manipulation tools - # Automatically converted from old format: GPLv3 - review is highly recommended. License: GPL-3.0-only URL: https://vcftools.github.io/ @@ -13,7 +12,6 @@ BuildRequires: perl-generators BuildRequires: perl-interpreter BuildRequires: zlib-devel - %description A program package designed for working with VCF files, such as those generated by the 1000 Genomes Project. The aim of VCFtools is to @@ -70,159 +68,4 @@ make check %{_mandir}/man1/vcftools.1.gz %changelog -* Fri Jul 25 2025 Fedora Release Engineering - 0.1.16-22 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_43_Mass_Rebuild - -* Sun Jan 19 2025 Fedora Release Engineering - 0.1.16-21 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_42_Mass_Rebuild - -* Mon Jul 29 2024 Miroslav Suchý - 0.1.16-20 -- convert license to SPDX - -* Sat Jul 20 2024 Fedora Release Engineering - 0.1.16-19 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_41_Mass_Rebuild - -* Sat Jan 27 2024 Fedora Release Engineering - 0.1.16-18 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild - -* Sat Jul 22 2023 Fedora Release Engineering - 0.1.16-17 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild - -* Sat Jan 21 2023 Fedora Release Engineering - 0.1.16-16 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild - -* Thu Sep 01 2022 Filipe Rosset - 0.1.16-15 -- spec cleanup and modernization - -* Sat Jul 23 2022 Fedora Release Engineering - 0.1.16-14 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild - -* Mon May 30 2022 Jitka Plesnikova - 0.1.16-13 -- Perl 5.36 rebuild - -* Sat Jan 22 2022 Fedora Release Engineering - 0.1.16-12 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild - -* Fri Jul 23 2021 Fedora Release Engineering - 0.1.16-11 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild - -* Fri May 21 2021 Jitka Plesnikova - 0.1.16-10 -- Perl 5.34 rebuild - -* Wed Jan 27 2021 Fedora Release Engineering - 0.1.16-9 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild - -* Wed Jul 29 2020 Fedora Release Engineering - 0.1.16-8 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild - -* Fri Jun 26 2020 Jitka Plesnikova - 0.1.16-7 -- Perl 5.32 re-rebuild of bootstrapped packages - -* Mon Jun 22 2020 Jitka Plesnikova - 0.1.16-6 -- Perl 5.32 rebuild - -* Fri Jan 31 2020 Fedora Release Engineering - 0.1.16-5 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild - -* Sat Jul 27 2019 Fedora Release Engineering - 0.1.16-4 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild - -* Mon Jun 17 2019 Petr Pisar - 0.1.16-3 -- Install Perl modules into a vendor Perl path - -* Sun Feb 03 2019 Fedora Release Engineering - 0.1.16-2 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild - -* Sun Aug 05 2018 Adam Huffman - 0.1.16-1 -- Update to latest upstream release 0.1.16 - -* Sat Jul 14 2018 Fedora Release Engineering - 0.1.15-7 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild - -* Mon Apr 09 2018 Filipe Rosset - 0.1.15-6 -- added gcc-c++ as BR - -* Fri Feb 09 2018 Fedora Release Engineering - 0.1.15-5 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild - -* Thu Aug 03 2017 Fedora Release Engineering - 0.1.15-4 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild - -* Thu Jul 27 2017 Fedora Release Engineering - 0.1.15-3 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild - -* Mon May 15 2017 Fedora Release Engineering - 0.1.15-2 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_27_Mass_Rebuild - -* Fri Apr 21 2017 Filipe Rosset - 0.1.15-1 -- Update to latest upstream release 0.1.15 - -* Sat Feb 11 2017 Fedora Release Engineering - 0.1.14-2 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild - -* Tue Nov 08 2016 Filipe Rosset - 0.1.14-1 -- Update to latest upstream release 0.1.14 -- Fix FTBFS rhbz #1308219 -- Fix rhbz #1365319 thanks to Aram Minasyan -- Spec modernization/clean up, new URLs from GitHub - -* Fri Feb 05 2016 Fedora Release Engineering - 0.1.11-9 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild - -* Fri Jun 19 2015 Fedora Release Engineering - 0.1.11-8 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild - -* Sat May 02 2015 Kalev Lember - 0.1.11-7 -- Rebuilt for GCC 5 C++11 ABI change - -* Mon Aug 18 2014 Fedora Release Engineering - 0.1.11-6 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild - -* Sun Jun 08 2014 Fedora Release Engineering - 0.1.11-5 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_Mass_Rebuild - -* Sat Aug 03 2013 Petr Pisar - 0.1.11-4 -- Perl 5.18 rebuild - -* Tue Jul 30 2013 Peter Robinson 0.1.11-3 -- Use distro CFLAGS (fix FTBFS on ARM) - -* Thu Jul 18 2013 Petr Pisar - 0.1.11-2 -- Perl 5.18 rebuild - -* Wed Jul 03 2013 - 0.1.11-1 -- Update to latest upstream release 0.1.11 - -* Fri Feb 15 2013 Fedora Release Engineering - 0.1.9-2 -- Rebuilt for https://fedoraproject.org/wiki/Fedora_19_Mass_Rebuild - -* Sun Jul 29 2012 - 0.1.9-1 -- Update to 0.1.9 -- Remove perl patch that's no longer needed - -* Thu Jan 5 2012 Adam Huffman - 0.1.7-1 -- update to upstream release 0.1.7 -- remove fill-rsIDs -- update Perl makefile patch - -* Sun Jul 31 2011 Adam Huffman - 0.1.6-1 -- update to 0.1.6 - -* Tue May 3 2011 Adam Huffman - 0.1.5-2 -- minor fix to Jack's Perl patch -- permissions fix -- hardcoded path fix -- cleaner Makefile fix - -* Sun May 1 2011 Jack Tanner - 0.1.5-1 -- bump to 0.1.5 -- rename compare-vcf, merge-vcf, and query-vcf to vcf-compare, - vcf-merge, and vcf-query -- add VcfStats.pm to perl export -- patch perl/Makefile to export VcfStats.pm - -* Mon Mar 21 2011 Adam Huffman - 0.1.4a-1 -- initial version -- fix CPPFLAGS -- fix hardcoded installation location - +%autochangelog From 0e7bbaa892e2867823900dba8c3350586a0a32bf Mon Sep 17 00:00:00 2001 From: Filipe Rosset Date: Sun, 9 Nov 2025 19:26:47 -0300 Subject: [PATCH 44/46] update to 0.1.17 --- .gitignore | 1 + sources | 2 +- vcftools.spec | 2 +- 3 files changed, 3 insertions(+), 2 deletions(-) diff --git a/.gitignore b/.gitignore index 7c0a8bc..61d265c 100644 --- a/.gitignore +++ b/.gitignore @@ -3,3 +3,4 @@ /vcftools-0.1.14.tar.gz /vcftools-0.1.15.tar.gz /vcftools-0.1.16.tar.gz +/vcftools-0.1.17.tar.gz diff --git a/sources b/sources index 1088c67..6131466 100644 --- a/sources +++ b/sources @@ -1 +1 @@ -SHA512 (vcftools-0.1.16.tar.gz) = c4dd5ceb3ad0512e839154d8a05ef3e7a03cbe52c3099df48775b35460fce7ef10102819c2d1cefa33b98ad09e7bd1608e871978860ec9c0b0c2e781892b22e6 +SHA512 (vcftools-0.1.17.tar.gz) = 8adf2490b5d0886302f8f19efc735e4b96d657d70a764b6fa397acdf6f83b54da29dc73e9b96b275a793a511996c415630255610249e6eb5441bc783e82853d9 diff --git a/vcftools.spec b/vcftools.spec index 84d7e3d..ab1d67f 100644 --- a/vcftools.spec +++ b/vcftools.spec @@ -1,5 +1,5 @@ Name: vcftools -Version: 0.1.16 +Version: 0.1.17 Release: %autorelease Summary: VCF file manipulation tools # Automatically converted from old format: GPLv3 - review is highly recommended. From dd682cb08295184f1a6e4350ca0d0951e7eb9154 Mon Sep 17 00:00:00 2001 From: Fedora Release Engineering Date: Sat, 17 Jan 2026 19:48:28 +0000 Subject: [PATCH 45/46] Rebuilt for https://fedoraproject.org/wiki/Fedora_44_Mass_Rebuild From a1d5789906f6f37b48459bf6e9fe3ff4c501f57c Mon Sep 17 00:00:00 2001 From: Fedora Release Engineering Date: Fri, 17 Jul 2026 08:23:13 +0000 Subject: [PATCH 46/46] Rebuilt for https://fedoraproject.org/wiki/Fedora_45_Mass_Rebuild