rpms/vcftools
3
0
Fork 0
Code Issues Pull requests Projects Releases Packages Wiki Activity Actions

Compare commits

merge into: rpms:f40
Branches Tags
rpms:rawhide
rpms:f45
rpms:main
rpms:f44
rpms:epel8
rpms:epel10
rpms:epel10.1
rpms:epel10.2
rpms:epel10.3
rpms:epel9
rpms:f41
rpms:f42
rpms:f43
rpms:f40
rpms:f39
rpms:f38
rpms:f37
rpms:epel8-playground
rpms:f36
rpms:f35
rpms:f34
rpms:f33
rpms:f32
rpms:f31
rpms:f30
rpms:epel7
rpms:f28
rpms:f29
rpms:f27
rpms:f26
rpms:f24
rpms:f25
rpms:f23
rpms:f21
rpms:f22
rpms:f20
rpms:f19
rpms:el5
rpms:el6
rpms:f18
rpms:f16
rpms:f17
...
pull from: rpms:rawhide
Branches Tags
rpms:f45
rpms:main
rpms:rawhide
rpms:f44
rpms:epel8
rpms:epel10
rpms:epel10.1
rpms:epel10.2
rpms:epel10.3
rpms:epel9
rpms:f41
rpms:f42
rpms:f43
rpms:f40
rpms:f39
rpms:f38
rpms:f37
rpms:epel8-playground
rpms:f36
rpms:f35
rpms:f34
rpms:f33
rpms:f32
rpms:f31
rpms:f30
rpms:epel7
rpms:f28
rpms:f29
rpms:f27
rpms:f26
rpms:f24
rpms:f25
rpms:f23
rpms:f21
rpms:f22
rpms:f20
rpms:f19
rpms:el5
rpms:el6
rpms:f18
rpms:f16
rpms:f17
Sign in to create a new pull request.

8 commits
f40 ... rawhide

Author SHA1 Message Date
Fedora Release Engineering
a1d5789906 Rebuilt for https://fedoraproject.org/wiki/Fedora_45_Mass_Rebuild 2026-07-17 08:23:13 +00:00
Fedora Release Engineering
dd682cb082 Rebuilt for https://fedoraproject.org/wiki/Fedora_44_Mass_Rebuild 2026-01-17 19:48:28 +00:00
Filipe Rosset
975fa63c92 update to 0.1.17 2025-11-09 19:26:47 -03:00
Filipe Rosset
c5fc28c05e opt-in to autochangelog 2025-11-09 16:00:51 -03:00
Fedora Release Engineering
2074c1fa59 Rebuilt for https://fedoraproject.org/wiki/Fedora_43_Mass_Rebuild 2025-07-25 19:59:11 +00:00
Fedora Release Engineering
ce392b809a Rebuilt for https://fedoraproject.org/wiki/Fedora_42_Mass_Rebuild 2025-01-19 14:08:49 +00:00
Miroslav Suchý
864c18990b convert GPLv3 license to SPDX 
This is part of https://fedoraproject.org/wiki/Changes/SPDX_Licenses_Phase_4
 2024-07-29 14:44:32 +02:00
Fedora Release Engineering
5bd87dbd1d Rebuilt for https://fedoraproject.org/wiki/Fedora_41_Mass_Rebuild 2024-07-20 08:36:13 +00:00
4 changed files with 163 additions and 150 deletions
Download patch file Download diff file Expand all files Collapse all files

1
.gitignore vendored
View file

@ -3,3 +3,4 @@
/vcftools-0.1.14.tar.gz /vcftools-0.1.14.tar.gz
/vcftools-0.1.15.tar.gz /vcftools-0.1.15.tar.gz
/vcftools-0.1.16.tar.gz /vcftools-0.1.16.tar.gz
/vcftools-0.1.17.tar.gz

156
changelog Normal file
View file

@ -0,0 +1,156 @@
* Fri Jul 25 2025 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.16-22
- Rebuilt for https://fedoraproject.org/wiki/Fedora_43_Mass_Rebuild
* Sun Jan 19 2025 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.16-21
- Rebuilt for https://fedoraproject.org/wiki/Fedora_42_Mass_Rebuild
* Mon Jul 29 2024 Miroslav Suchý <msuchy@redhat.com> - 0.1.16-20
- convert license to SPDX
* Sat Jul 20 2024 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.16-19
- Rebuilt for https://fedoraproject.org/wiki/Fedora_41_Mass_Rebuild
* Sat Jan 27 2024 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.16-18
- Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild
* Sat Jul 22 2023 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.16-17
- Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild
* Sat Jan 21 2023 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.16-16
- Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild
* Thu Sep 01 2022 Filipe Rosset <rosset.filipe@gmail.com> - 0.1.16-15
- spec cleanup and modernization
* Sat Jul 23 2022 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.16-14
- Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild
* Mon May 30 2022 Jitka Plesnikova <jplesnik@redhat.com> - 0.1.16-13
- Perl 5.36 rebuild
* Sat Jan 22 2022 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.16-12
- Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild
* Fri Jul 23 2021 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.16-11
- Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild
* Fri May 21 2021 Jitka Plesnikova <jplesnik@redhat.com> - 0.1.16-10
- Perl 5.34 rebuild
* Wed Jan 27 2021 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.16-9
- Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild
* Wed Jul 29 2020 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.16-8
- Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild
* Fri Jun 26 2020 Jitka Plesnikova <jplesnik@redhat.com> - 0.1.16-7
- Perl 5.32 re-rebuild of bootstrapped packages
* Mon Jun 22 2020 Jitka Plesnikova <jplesnik@redhat.com> - 0.1.16-6
- Perl 5.32 rebuild
* Fri Jan 31 2020 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.16-5
- Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild
* Sat Jul 27 2019 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.16-4
- Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild
* Mon Jun 17 2019 Petr Pisar <ppisar@redhat.com> - 0.1.16-3
- Install Perl modules into a vendor Perl path
* Sun Feb 03 2019 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.16-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild
* Sun Aug 05 2018 Adam Huffman <bloch@verdurin.com> - 0.1.16-1
- Update to latest upstream release 0.1.16
* Sat Jul 14 2018 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.15-7
- Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Mon Apr 09 2018 Filipe Rosset <rosset.filipe@gmail.com> - 0.1.15-6
- added gcc-c++ as BR
* Fri Feb 09 2018 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.15-5
- Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild
* Thu Aug 03 2017 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.15-4
- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild
* Thu Jul 27 2017 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.15-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild
* Mon May 15 2017 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 0.1.15-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_27_Mass_Rebuild
* Fri Apr 21 2017 Filipe Rosset <rosset.filipe@gmail.com> - 0.1.15-1
- Update to latest upstream release 0.1.15
* Sat Feb 11 2017 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.14-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild
* Tue Nov 08 2016 Filipe Rosset <rosset.filipe@gmail.com> - 0.1.14-1
- Update to latest upstream release 0.1.14
- Fix FTBFS rhbz #1308219
- Fix rhbz #1365319 thanks to Aram Minasyan
- Spec modernization/clean up, new URLs from GitHub
* Fri Feb 05 2016 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.11-9
- Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild
* Fri Jun 19 2015 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 0.1.11-8
- Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild
* Sat May 02 2015 Kalev Lember <kalevlember@gmail.com> - 0.1.11-7
- Rebuilt for GCC 5 C++11 ABI change
* Mon Aug 18 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 0.1.11-6
- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild
* Sun Jun 08 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 0.1.11-5
- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_Mass_Rebuild
* Sat Aug 03 2013 Petr Pisar <ppisar@redhat.com> - 0.1.11-4
- Perl 5.18 rebuild
* Tue Jul 30 2013 Peter Robinson <pbrobinson@fedoraproject.org> 0.1.11-3
- Use distro CFLAGS (fix FTBFS on ARM)
* Thu Jul 18 2013 Petr Pisar <ppisar@redhat.com> - 0.1.11-2
- Perl 5.18 rebuild
* Wed Jul 03 2013 <bloch@verdurin.com> - 0.1.11-1
- Update to latest upstream release 0.1.11
* Fri Feb 15 2013 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 0.1.9-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_19_Mass_Rebuild
* Sun Jul 29 2012 <bloch@verdurin.com> - 0.1.9-1
- Update to 0.1.9
- Remove perl patch that's no longer needed
* Thu Jan 5 2012 Adam Huffman <verdurin@fedoraproject.org> - 0.1.7-1
- update to upstream release 0.1.7
- remove fill-rsIDs
- update Perl makefile patch
* Sun Jul 31 2011 Adam Huffman <bloch@verdurin.com> - 0.1.6-1
- update to 0.1.6
* Tue May 3 2011 Adam Huffman <bloch@verdurin.com> - 0.1.5-2
- minor fix to Jack's Perl patch
- permissions fix
- hardcoded path fix
- cleaner Makefile fix
* Sun May 1 2011 Jack Tanner <ihok@hotmail.com> - 0.1.5-1
- bump to 0.1.5
- rename compare-vcf, merge-vcf, and query-vcf to vcf-compare,
vcf-merge, and vcf-query
- add VcfStats.pm to perl export
- patch perl/Makefile to export VcfStats.pm
* Mon Mar 21 2011 Adam Huffman <bloch@verdurin.com> - 0.1.4a-1
- initial version
- fix CPPFLAGS
- fix hardcoded installation location

2
sources
View file

@ -1 +1 @@
SHA512 (vcftools-0.1.16.tar.gz) = c4dd5ceb3ad0512e839154d8a05ef3e7a03cbe52c3099df48775b35460fce7ef10102819c2d1cefa33b98ad09e7bd1608e871978860ec9c0b0c2e781892b22e6 SHA512 (vcftools-0.1.17.tar.gz) = 8adf2490b5d0886302f8f19efc735e4b96d657d70a764b6fa397acdf6f83b54da29dc73e9b96b275a793a511996c415630255610249e6eb5441bc783e82853d9

154
vcftools.spec
View file

@ -1,9 +1,9 @@
Name: vcftools Name: vcftools
Version: 0.1.16 Version: 0.1.17
Release: 18%{?dist} Release: %autorelease
Summary: VCF file manipulation tools Summary: VCF file manipulation tools
# Automatically converted from old format: GPLv3 - review is highly recommended.
License: GPLv3 License: GPL-3.0-only
URL: https://vcftools.github.io/ URL: https://vcftools.github.io/
Source0: https://github.com/%{name}/%{name}/releases/download/v%{version}/%{name}-%{version}.tar.gz Source0: https://github.com/%{name}/%{name}/releases/download/v%{version}/%{name}-%{version}.tar.gz
BuildRequires: make BuildRequires: make
@ -12,7 +12,6 @@ BuildRequires: perl-generators
BuildRequires: perl-interpreter BuildRequires: perl-interpreter
BuildRequires: zlib-devel BuildRequires: zlib-devel
%description %description
A program package designed for working with VCF files, such as those A program package designed for working with VCF files, such as those
generated by the 1000 Genomes Project. The aim of VCFtools is to generated by the 1000 Genomes Project. The aim of VCFtools is to
@ -69,147 +68,4 @@ make check
%{_mandir}/man1/vcftools.1.gz %{_mandir}/man1/vcftools.1.gz
%changelog %changelog
* Sat Jan 27 2024 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.16-18 %autochangelog
- Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild
* Sat Jul 22 2023 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.16-17
- Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild
* Sat Jan 21 2023 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.16-16
- Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild
* Thu Sep 01 2022 Filipe Rosset <rosset.filipe@gmail.com> - 0.1.16-15
- spec cleanup and modernization
* Sat Jul 23 2022 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.16-14
- Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild
* Mon May 30 2022 Jitka Plesnikova <jplesnik@redhat.com> - 0.1.16-13
- Perl 5.36 rebuild
* Sat Jan 22 2022 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.16-12
- Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild
* Fri Jul 23 2021 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.16-11
- Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild
* Fri May 21 2021 Jitka Plesnikova <jplesnik@redhat.com> - 0.1.16-10
- Perl 5.34 rebuild
* Wed Jan 27 2021 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.16-9
- Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild
* Wed Jul 29 2020 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.16-8
- Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild
* Fri Jun 26 2020 Jitka Plesnikova <jplesnik@redhat.com> - 0.1.16-7
- Perl 5.32 re-rebuild of bootstrapped packages
* Mon Jun 22 2020 Jitka Plesnikova <jplesnik@redhat.com> - 0.1.16-6
- Perl 5.32 rebuild
* Fri Jan 31 2020 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.16-5
- Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild
* Sat Jul 27 2019 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.16-4
- Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild
* Mon Jun 17 2019 Petr Pisar <ppisar@redhat.com> - 0.1.16-3
- Install Perl modules into a vendor Perl path
* Sun Feb 03 2019 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.16-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild
* Sun Aug 05 2018 Adam Huffman <bloch@verdurin.com> - 0.1.16-1
- Update to latest upstream release 0.1.16
* Sat Jul 14 2018 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.15-7
- Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Mon Apr 09 2018 Filipe Rosset <rosset.filipe@gmail.com> - 0.1.15-6
- added gcc-c++ as BR
* Fri Feb 09 2018 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.15-5
- Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild
* Thu Aug 03 2017 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.15-4
- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild
* Thu Jul 27 2017 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.15-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild
* Mon May 15 2017 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 0.1.15-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_27_Mass_Rebuild
* Fri Apr 21 2017 Filipe Rosset <rosset.filipe@gmail.com> - 0.1.15-1
- Update to latest upstream release 0.1.15
* Sat Feb 11 2017 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.14-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild
* Tue Nov 08 2016 Filipe Rosset <rosset.filipe@gmail.com> - 0.1.14-1
- Update to latest upstream release 0.1.14
- Fix FTBFS rhbz #1308219
- Fix rhbz #1365319 thanks to Aram Minasyan
- Spec modernization/clean up, new URLs from GitHub
* Fri Feb 05 2016 Fedora Release Engineering <releng@fedoraproject.org> - 0.1.11-9
- Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild
* Fri Jun 19 2015 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 0.1.11-8
- Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild
* Sat May 02 2015 Kalev Lember <kalevlember@gmail.com> - 0.1.11-7
- Rebuilt for GCC 5 C++11 ABI change
* Mon Aug 18 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 0.1.11-6
- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild
* Sun Jun 08 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 0.1.11-5
- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_Mass_Rebuild
* Sat Aug 03 2013 Petr Pisar <ppisar@redhat.com> - 0.1.11-4
- Perl 5.18 rebuild
* Tue Jul 30 2013 Peter Robinson <pbrobinson@fedoraproject.org> 0.1.11-3
- Use distro CFLAGS (fix FTBFS on ARM)
* Thu Jul 18 2013 Petr Pisar <ppisar@redhat.com> - 0.1.11-2
- Perl 5.18 rebuild
* Wed Jul 03 2013 <bloch@verdurin.com> - 0.1.11-1
- Update to latest upstream release 0.1.11
* Fri Feb 15 2013 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 0.1.9-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_19_Mass_Rebuild
* Sun Jul 29 2012 <bloch@verdurin.com> - 0.1.9-1
- Update to 0.1.9
- Remove perl patch that's no longer needed
* Thu Jan 5 2012 Adam Huffman <verdurin@fedoraproject.org> - 0.1.7-1
- update to upstream release 0.1.7
- remove fill-rsIDs
- update Perl makefile patch
* Sun Jul 31 2011 Adam Huffman <bloch@verdurin.com> - 0.1.6-1
- update to 0.1.6
* Tue May 3 2011 Adam Huffman <bloch@verdurin.com> - 0.1.5-2
- minor fix to Jack's Perl patch
- permissions fix
- hardcoded path fix
- cleaner Makefile fix
* Sun May 1 2011 Jack Tanner <ihok@hotmail.com> - 0.1.5-1
- bump to 0.1.5
- rename compare-vcf, merge-vcf, and query-vcf to vcf-compare,
vcf-merge, and vcf-query
- add VcfStats.pm to perl export
- patch perl/Makefile to export VcfStats.pm
* Mon Mar 21 2011 Adam Huffman <bloch@verdurin.com> - 0.1.4a-1
- initial version
- fix CPPFLAGS
- fix hardcoded installation location